RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 NARFQ9UHQ1 456 aa17.79■□□□□ 0.44
CDH20-203ENST00000538374 SH2B2O14492 632 aaPredicted RBP17.78■□□□□ 0.44
CDH20-203ENST00000538374 CMA1P23946 247 aa17.78■□□□□ 0.44
CDH20-203ENST00000538374 PDE4BQ07343 736 aa17.78■□□□□ 0.44
CDH20-203ENST00000538374 ERFEQ4G0M1 354 aa17.78■□□□□ 0.44
CDH20-203ENST00000538374 PDE6AP16499 860 aa17.78■□□□□ 0.44
CDH20-203ENST00000538374 ERCC6LQ2NKX8 1250 aa17.78■□□□□ 0.44
CDH20-203ENST00000538374 MEX3CQ5U5Q3 659 aaKnown RBP17.78■□□□□ 0.44
CDH20-203ENST00000538374 TBC1D9BQ66K14 1250 aa17.78■□□□□ 0.44
CDH20-203ENST00000538374 LPIN2Q92539 896 aa17.78■□□□□ 0.44
CDH20-203ENST00000538374 ZSWIM5Q9P217 1185 aa17.78■□□□□ 0.44
CDH20-203ENST00000538374 hCG_1642624A0A1W2PR95 340 aa17.77■□□□□ 0.44
CDH20-203ENST00000538374 WTIPA6NIX2 430 aaPredicted RBP17.77■□□□□ 0.44
CDH20-203ENST00000538374 BTBD18B2RXH4 712 aa17.77■□□□□ 0.44
CDH20-203ENST00000538374 FBXO38Q6PIJ6 1188 aa17.77■□□□□ 0.44
CDH20-203ENST00000538374 BRAPQ7Z569 592 aa17.77■□□□□ 0.44
CDH20-203ENST00000538374 PDILTQ8N807 584 aa17.77■□□□□ 0.44
CDH20-203ENST00000538374 ZBTB9Q96C00 473 aa17.77■□□□□ 0.44
CDH20-203ENST00000538374 EPB41L4AQ9HCS5 686 aaPredicted RBP17.77■□□□□ 0.44
CDH20-203ENST00000538374 BMP6P22004 513 aa17.77■□□□□ 0.44
CDH20-203ENST00000538374 SFPQP23246 707 aaKnown RBP eCLIP17.77■□□□□ 0.44
CDH20-203ENST00000538374 PTPAQ15257 358 aa17.77■□□□□ 0.44
CDH20-203ENST00000538374 TMEM67Q5HYA8 995 aa17.77■□□□□ 0.44
CDH20-203ENST00000538374 MAGEB6Q8N7X4 407 aa17.77■□□□□ 0.44
CDH20-203ENST00000538374 IGDCC4Q8TDY8 1250 aa17.77■□□□□ 0.44
CDH20-203ENST00000538374 FANCLQ9NW38 375 aa17.77■□□□□ 0.44
CDH20-203ENST00000538374 CCNL1Q9UK58 526 aaPredicted RBP17.77■□□□□ 0.44
CDH20-203ENST00000538374 SERPINC1P01008 464 aa17.76■□□□□ 0.43
CDH20-203ENST00000538374 SF3B3Q15393 1217 aaKnown RBP17.76■□□□□ 0.43
CDH20-203ENST00000538374 METTL16Q86W50 562 aaKnown RBP17.76■□□□□ 0.43
CDH20-203ENST00000538374 MIGA1Q8NAN2 632 aa17.76■□□□□ 0.43
CDH20-203ENST00000538374 AIDAQ96BJ3 306 aa17.76■□□□□ 0.43
CDH20-203ENST00000538374 OSBPL5Q9H0X9 879 aaPredicted RBP17.76■□□□□ 0.43
CDH20-203ENST00000538374 TRPC5Q9UL62 973 aaPredicted RBP17.76■□□□□ 0.43
CDH20-203ENST00000538374 GOLGA8AA7E2F4 631 aa17.76■□□□□ 0.43
CDH20-203ENST00000538374 FANCGO15287 622 aa17.76■□□□□ 0.43
CDH20-203ENST00000538374 ZBTB43O43298 467 aa17.76■□□□□ 0.43
CDH20-203ENST00000538374 NTRK3Q16288 839 aa17.76■□□□□ 0.43
CDH20-203ENST00000538374 CFAP100Q494V2 611 aa17.76■□□□□ 0.43
CDH20-203ENST00000538374 SLC10A5Q5PT55 438 aa17.76■□□□□ 0.43
CDH20-203ENST00000538374 FBXL16Q8N461 479 aa17.76■□□□□ 0.43
CDH20-203ENST00000538374 KIF18AQ8NI77 898 aa17.76■□□□□ 0.43
CDH20-203ENST00000538374 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.76■□□□□ 0.43
CDH20-203ENST00000538374 SRP68Q9UHB9 627 aaKnown RBP17.76■□□□□ 0.43
CDH20-203ENST00000538374 ZMYM6O95789 1325 aa17.76■□□□□ 0.43
CDH20-203ENST00000538374 NEMFO60524 1076 aa17.75■□□□□ 0.43
CDH20-203ENST00000538374 MBD4O95243 580 aa17.75■□□□□ 0.43
CDH20-203ENST00000538374 IARSP41252 1262 aaKnown RBP17.75■□□□□ 0.43
CDH20-203ENST00000538374 UBASH3AP57075 661 aa17.75■□□□□ 0.43
CDH20-203ENST00000538374 TRMT44Q8IYL2 757 aaKnown RBP17.75■□□□□ 0.43
CDH20-203ENST00000538374 SEPT12Q8IYM1 358 aa17.75■□□□□ 0.43
CDH20-203ENST00000538374 MAP3K14Q99558 947 aa17.75■□□□□ 0.43
CDH20-203ENST00000538374 EPC1Q9H2F5 836 aa17.75■□□□□ 0.43
CDH20-203ENST00000538374 LY9Q9HBG7 655 aa17.75■□□□□ 0.43
CDH20-203ENST00000538374 PCDHA5Q9Y5H7 936 aa17.75■□□□□ 0.43
CDH20-203ENST00000538374 IFIT3O14879 490 aaKnown RBP17.75■□□□□ 0.43
CDH20-203ENST00000538374 NR5A1Q13285 461 aa17.75■□□□□ 0.43
CDH20-203ENST00000538374 LRRFIP1Q32MZ4 808 aaKnown RBP17.75■□□□□ 0.43
CDH20-203ENST00000538374 USP49Q70CQ1 688 aa17.75■□□□□ 0.43
CDH20-203ENST00000538374 HOMER1Q86YM7 354 aa17.75■□□□□ 0.43
CDH20-203ENST00000538374 STRBPQ96SI9 672 aaKnown RBP17.75■□□□□ 0.43
CDH20-203ENST00000538374 GNPATO15228 680 aa17.75■□□□□ 0.43
CDH20-203ENST00000538374 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.75■□□□□ 0.43
CDH20-203ENST00000538374 PRR29P0C7W0 189 aa17.74■□□□□ 0.43
CDH20-203ENST00000538374 UQCRFS1P1P0C7P4 283 aa17.74■□□□□ 0.43
CDH20-203ENST00000538374 CASP1P29466 404 aa17.74■□□□□ 0.43
CDH20-203ENST00000538374 MPHOSPH8Q99549 860 aa17.74■□□□□ 0.43
CDH20-203ENST00000538374 DNAI1Q9UI46 699 aa17.74■□□□□ 0.43
CDH20-203ENST00000538374 COBLO75128 1261 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 SLC5A1P13866 664 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 GSDMDP57764 484 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 IFNL3Q8IZI9 196 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 CNNM3Q8NE01 707 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 OXER1Q8TDS5 423 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 NUP133Q8WUM0 1156 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 CHD4Q14839 1912 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 MYH13Q9UKX3 1938 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 TCRBV5S4A2TA0A5A2 114 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 FAM205CA6NFA0 338 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 IGHMBP2P38935 993 aaKnown RBP17.73■□□□□ 0.43
CDH20-203ENST00000538374 TOB1P50616 345 aaPredicted RBP17.73■□□□□ 0.43
CDH20-203ENST00000538374 CHRNDQ07001 517 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 RASGRF1Q13972 1273 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 CGNQ9P2M7 1197 aaKnown RBP17.73■□□□□ 0.43
CDH20-203ENST00000538374 DDX41Q9UJV9 622 aaKnown RBP17.73■□□□□ 0.43
CDH20-203ENST00000538374 KCNH3Q9ULD8 1083 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 HPSEQ9Y251 543 aa17.73■□□□□ 0.43
CDH20-203ENST00000538374 BAZ2BQ9UIF8 2168 aaKnown RBP17.73■□□□□ 0.43
CDH20-203ENST00000538374 BCAMP50895 628 aa17.72■□□□□ 0.43
CDH20-203ENST00000538374 CHMP4CQ96CF2 233 aa17.72■□□□□ 0.43
CDH20-203ENST00000538374 NAPBQ9H115 298 aa17.72■□□□□ 0.43
CDH20-203ENST00000538374 OGFRQ9NZT2 677 aa17.72■□□□□ 0.43
CDH20-203ENST00000538374 SLC12A7Q9Y666 1083 aa17.72■□□□□ 0.43
CDH20-203ENST00000538374 EP400Q96L91 3159 aa17.72■□□□□ 0.43
CDH20-203ENST00000538374 SLU7O95391 586 aaKnown RBP17.72■□□□□ 0.43
CDH20-203ENST00000538374 TTF1Q15361 905 aaPredicted RBP17.72■□□□□ 0.43
CDH20-203ENST00000538374 ARHGEF1Q92888 912 aaKnown RBP17.72■□□□□ 0.43
CDH20-203ENST00000538374 LRRC4BQ9NT99 713 aa17.72■□□□□ 0.43
CDH20-203ENST00000538374 INTS13Q9NVM9 706 aa17.72■□□□□ 0.43
CDH20-203ENST00000538374 ZNF446Q9NWS9 450 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms