RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 HDAC9Q9UKV0 1011 aa17.79■□□□□ 0.44
PXN-208ENST00000538144 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.79■□□□□ 0.44
PXN-208ENST00000538144 SH2B2O14492 632 aaPredicted RBP17.79■□□□□ 0.44
PXN-208ENST00000538144 IFIT3O14879 490 aaKnown RBP17.79■□□□□ 0.44
PXN-208ENST00000538144 PCP11498 1178 aaKnown RBP17.79■□□□□ 0.44
PXN-208ENST00000538144 CACNB3P54284 484 aa17.79■□□□□ 0.44
PXN-208ENST00000538144 OGFOD1Q8N543 542 aa17.79■□□□□ 0.44
PXN-208ENST00000538144 AGBL3Q8NEM8 1001 aa17.79■□□□□ 0.44
PXN-208ENST00000538144 PRMT6Q96LA8 375 aaPredicted RBP17.79■□□□□ 0.44
PXN-208ENST00000538144 BRPF3Q9ULD4 1205 aa17.79■□□□□ 0.44
PXN-208ENST00000538144 ANGEL1Q9UNK9 670 aaKnown RBP17.79■□□□□ 0.44
PXN-208ENST00000538144 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.79■□□□□ 0.44
PXN-208ENST00000538144 NFIAQ12857 509 aa17.78■□□□□ 0.44
PXN-208ENST00000538144 TNIP1Q15025 636 aa17.78■□□□□ 0.44
PXN-208ENST00000538144 TMEM67Q5HYA8 995 aa17.78■□□□□ 0.44
PXN-208ENST00000538144 TDRD3Q9H7E2 651 aaKnown RBP17.78■□□□□ 0.44
PXN-208ENST00000538144 SENP2Q9HC62 589 aa17.78■□□□□ 0.44
PXN-208ENST00000538144 KLF18A0A0U1RQI7 1052 aa17.77■□□□□ 0.44
PXN-208ENST00000538144 ORC4O43929 436 aa17.77■□□□□ 0.44
PXN-208ENST00000538144 PDIA3P30101 505 aaKnown RBP17.77■□□□□ 0.44
PXN-208ENST00000538144 TNPO1Q92973 898 aaKnown RBP17.77■□□□□ 0.44
PXN-208ENST00000538144 ZNF274Q96GC6 653 aaPredicted RBP17.77■□□□□ 0.44
PXN-208ENST00000538144 PFKFB2O60825 505 aa17.77■□□□□ 0.43
PXN-208ENST00000538144 EIF6P56537 245 aaKnown RBP17.77■□□□□ 0.43
PXN-208ENST00000538144 EVCP57679 992 aa17.77■□□□□ 0.43
PXN-208ENST00000538144 CCT2P78371 535 aaKnown RBP17.77■□□□□ 0.43
PXN-208ENST00000538144 SCRN1Q12765 414 aa17.77■□□□□ 0.43
PXN-208ENST00000538144 FAM47AQ5JRC9 791 aa17.77■□□□□ 0.43
PXN-208ENST00000538144 SLC44A5Q8NCS7 719 aa17.77■□□□□ 0.43
PXN-208ENST00000538144 GTF3C6Q969F1 213 aa17.77■□□□□ 0.43
PXN-208ENST00000538144 OSBPL5Q9H0X9 879 aaPredicted RBP17.77■□□□□ 0.43
PXN-208ENST00000538144 LY9Q9HBG7 655 aa17.77■□□□□ 0.43
PXN-208ENST00000538144 SMC3Q9UQE7 1217 aa17.77■□□□□ 0.43
PXN-208ENST00000538144 ROBO3Q96MS0 1386 aa17.76■□□□□ 0.43
PXN-208ENST00000538144 SBF1O95248 1867 aa17.76■□□□□ 0.43
PXN-208ENST00000538144 DDX11L8A8MPP1 907 aa17.76■□□□□ 0.43
PXN-208ENST00000538144 FZD9O00144 591 aa17.76■□□□□ 0.43
PXN-208ENST00000538144 TCP10Q12799 353 aa17.76■□□□□ 0.43
PXN-208ENST00000538144 SART3Q15020 963 aaKnown RBP17.76■□□□□ 0.43
PXN-208ENST00000538144 DLGAP5Q15398 846 aa17.76■□□□□ 0.43
PXN-208ENST00000538144 RAB11FIP4Q86YS3 637 aa17.76■□□□□ 0.43
PXN-208ENST00000538144 UBAC1Q9BSL1 405 aa17.76■□□□□ 0.43
PXN-208ENST00000538144 MKNK2Q9HBH9 465 aa17.76■□□□□ 0.43
PXN-208ENST00000538144 ERICH2A1L162 156 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 NFXL1Q6ZNB6 911 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 ZFPM1Q8IX07 1006 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 GJA3Q9Y6H8 435 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 DICER1Q9UPY3 1922 aaKnown RBP17.75■□□□□ 0.43
PXN-208ENST00000538144 UTRNP46939 3433 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 SHTN1A0MZ66 631 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 SPDYE2BA6NHP3 402 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 SPDYE6P0CI01 402 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 LIFRP42702 1097 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 WTAPQ15007 396 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 TTC6Q86TZ1 520 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 ZSCAN10Q96SZ4 725 aaPredicted RBP17.75■□□□□ 0.43
PXN-208ENST00000538144 IDI2Q9BXS1 227 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 NCOA5Q9HCD5 579 aaKnown RBP17.75■□□□□ 0.43
PXN-208ENST00000538144 FAM198AQ9UFP1 575 aa17.75■□□□□ 0.43
PXN-208ENST00000538144 TNKSO95271 1327 aa17.74■□□□□ 0.43
PXN-208ENST00000538144 TSPY2A6NKD2 308 aa17.74■□□□□ 0.43
PXN-208ENST00000538144 GOLGA8BA8MQT2 603 aa17.74■□□□□ 0.43
PXN-208ENST00000538144 YBX3P16989 372 aaKnown RBP eCLIP17.74■□□□□ 0.432e-6■□□□□ 9.5
PXN-208ENST00000538144 LMNB1P20700 586 aa17.74■□□□□ 0.43
PXN-208ENST00000538144 GJB2P29033 226 aa17.74■□□□□ 0.43
PXN-208ENST00000538144 CDK8P49336 464 aa17.74■□□□□ 0.43
PXN-208ENST00000538144 PKP1Q13835 747 aa17.74■□□□□ 0.43
PXN-208ENST00000538144 C16orf86Q6ZW13 317 aa17.74■□□□□ 0.43
PXN-208ENST00000538144 IQCA1Q86XH1 822 aa17.74■□□□□ 0.43
PXN-208ENST00000538144 ZNF444Q8N0Y2 327 aaPredicted RBP17.74■□□□□ 0.43
PXN-208ENST00000538144 MTA3Q9BTC8 594 aa17.74■□□□□ 0.43
PXN-208ENST00000538144 CCDC69A6NI79 296 aa17.73■□□□□ 0.43
PXN-208ENST00000538144 TFAP4Q01664 338 aa17.73■□□□□ 0.43
PXN-208ENST00000538144 SGMS1Q86VZ5 419 aa17.73■□□□□ 0.43
PXN-208ENST00000538144 HPS5Q9UPZ3 1129 aa17.73■□□□□ 0.43
PXN-208ENST00000538144 ZNF541Q9H0D2 1346 aa17.73■□□□□ 0.43
PXN-208ENST00000538144 MYH8P13535 1937 aa17.73■□□□□ 0.43
PXN-208ENST00000538144 CLRN2A0PK11 232 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 NMT2O60551 498 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 RXRAP19793 462 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 SEC23AQ15436 765 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 APOA5Q6Q788 366 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 ZNF287Q9HBT7 754 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 RASA1P20936 1047 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 RPS12P25398 132 aaKnown RBP17.72■□□□□ 0.43
PXN-208ENST00000538144 GMPSP49915 693 aaPredicted RBP17.72■□□□□ 0.43
PXN-208ENST00000538144 NUCB2P80303 420 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 TMTC2Q8N394 836 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 ENAHQ8N8S7 591 aaPredicted RBP17.72■□□□□ 0.43
PXN-208ENST00000538144 MTMR14Q8NCE2 650 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 GBP4Q96PP9 640 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 MYL10Q9BUA6 226 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 MYOZ2Q9NPC6 264 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 SLC12A7Q9Y666 1083 aa17.72■□□□□ 0.43
PXN-208ENST00000538144 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.43
PXN-208ENST00000538144 JAK2O60674 1132 aa17.71■□□□□ 0.43
PXN-208ENST00000538144 HLA-DOAP06340 250 aa17.71■□□□□ 0.43
PXN-208ENST00000538144 TSPY3P0CV98 308 aa17.71■□□□□ 0.43
PXN-208ENST00000538144 TSPY8P0CW00 308 aa17.71■□□□□ 0.43
PXN-208ENST00000538144 PTMSP20962 102 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms