RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 TBC1D2Q9BYX2 928 aa23.52■■□□□ 1.36
UBXN1-212ENST00000531625 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.52■■□□□ 1.36
UBXN1-212ENST00000531625 SRGAP3O43295 1099 aa23.51■■□□□ 1.35
UBXN1-212ENST00000531625 TFRCP02786 760 aaKnown RBP23.51■■□□□ 1.35
UBXN1-212ENST00000531625 LDHCP07864 332 aa23.51■■□□□ 1.35
UBXN1-212ENST00000531625 GNAI3P08754 354 aa23.51■■□□□ 1.35
UBXN1-212ENST00000531625 GSTO1P78417 241 aa23.51■■□□□ 1.35
UBXN1-212ENST00000531625 TREML2Q5T2D2 321 aa23.51■■□□□ 1.35
UBXN1-212ENST00000531625 CCDC84Q86UT8 332 aaPredicted RBP23.51■■□□□ 1.35
UBXN1-212ENST00000531625 ANKRD13CQ8N6S4 541 aa23.51■■□□□ 1.35
UBXN1-212ENST00000531625 ARHGAP45Q92619 1136 aa23.51■■□□□ 1.35
UBXN1-212ENST00000531625 DEFB118Q96PH6 123 aa23.51■■□□□ 1.35
UBXN1-212ENST00000531625 CRISPLD2Q9H0B8 497 aa23.51■■□□□ 1.35
UBXN1-212ENST00000531625 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.51■■□□□ 1.35
UBXN1-212ENST00000531625 HMG20BQ9P0W2 317 aa23.51■■□□□ 1.35
UBXN1-212ENST00000531625 GCLCP48506 637 aaPredicted RBP23.5■■□□□ 1.35
UBXN1-212ENST00000531625 NSUN4Q96CB9 384 aaKnown RBP23.5■■□□□ 1.35
UBXN1-212ENST00000531625 A0A1W2PPC1 479 aa23.49■■□□□ 1.35
UBXN1-212ENST00000531625 SPP2Q13103 211 aa23.49■■□□□ 1.35
UBXN1-212ENST00000531625 SPATA5Q8NB90 893 aa23.49■■□□□ 1.35
UBXN1-212ENST00000531625 ZNF280CQ8ND82 737 aa23.49■■□□□ 1.35
UBXN1-212ENST00000531625 FAM196BA6NMK8 535 aa23.48■■□□□ 1.35
UBXN1-212ENST00000531625 EVI5O60447 810 aa23.48■■□□□ 1.35
UBXN1-212ENST00000531625 RARSP54136 660 aaKnown RBP23.48■■□□□ 1.35
UBXN1-212ENST00000531625 PABPC4Q13310 644 aaKnown RBP eCLIP23.48■■□□□ 1.354e-10■■■■□ 23.7
UBXN1-212ENST00000531625 NEUROD6Q96NK8 337 aa23.48■■□□□ 1.35
UBXN1-212ENST00000531625 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.48■■□□□ 1.35
UBXN1-212ENST00000531625 ARID4AP29374 1257 aaPredicted RBP23.47■■□□□ 1.35
UBXN1-212ENST00000531625 CAP2P40123 477 aa23.47■■□□□ 1.35
UBXN1-212ENST00000531625 LOC285556D6RIA3 1793 aa23.46■■□□□ 1.35
UBXN1-212ENST00000531625 SH3D19Q5HYK7 790 aa23.46■■□□□ 1.35
UBXN1-212ENST00000531625 GORABQ5T7V8 394 aa23.46■■□□□ 1.35
UBXN1-212ENST00000531625 PI16Q6UXB8 463 aa23.46■■□□□ 1.35
UBXN1-212ENST00000531625 TBC1D9Q6ZT07 1266 aa23.46■■□□□ 1.35
UBXN1-212ENST00000531625 HERC5Q9UII4 1024 aaKnown RBP23.46■■□□□ 1.35
UBXN1-212ENST00000531625 TAOK2Q9UL54 1235 aa23.46■■□□□ 1.35
UBXN1-212ENST00000531625 USP17L5A8MUK1 530 aa23.45■■□□□ 1.34
UBXN1-212ENST00000531625 HMGCS2P54868 508 aa23.45■■□□□ 1.34
UBXN1-212ENST00000531625 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.45■■□□□ 1.34
UBXN1-212ENST00000531625 RAI14Q9P0K7 980 aa23.45■■□□□ 1.34
UBXN1-212ENST00000531625 GJD2Q9UKL4 321 aa23.45■■□□□ 1.34
UBXN1-212ENST00000531625 A0A0C4DFX4 3053 aa23.44■■□□□ 1.34
UBXN1-212ENST00000531625 HMGCRP04035 888 aa23.44■■□□□ 1.34
UBXN1-212ENST00000531625 RRP1BQ14684 758 aaKnown RBP23.44■■□□□ 1.34
UBXN1-212ENST00000531625 NECAB2Q7Z6G3 386 aa23.44■■□□□ 1.34
UBXN1-212ENST00000531625 ANKLE1Q8NAG6 615 aa23.44■■□□□ 1.34
UBXN1-212ENST00000531625 PAWRQ96IZ0 340 aaKnown RBP23.44■■□□□ 1.34
UBXN1-212ENST00000531625 ASCC2Q9H1I8 757 aaPredicted RBP23.44■■□□□ 1.34
UBXN1-212ENST00000531625 TEX11Q8IYF3 940 aa23.43■■□□□ 1.34
UBXN1-212ENST00000531625 AS3MTQ9HBK9 375 aa23.43■■□□□ 1.34
UBXN1-212ENST00000531625 MORF4L1Q9UBU8 362 aa23.43■■□□□ 1.34
UBXN1-212ENST00000531625 COL6A3P12111 3177 aa23.43■■□□□ 1.34
UBXN1-212ENST00000531625 ATAD5Q96QE3 1844 aa23.43■■□□□ 1.34
UBXN1-212ENST00000531625 UQCRFS1P1P0C7P4 283 aa23.42■■□□□ 1.34
UBXN1-212ENST00000531625 MCAMP43121 646 aa23.42■■□□□ 1.34
UBXN1-212ENST00000531625 WDR18Q9BV38 432 aa23.42■■□□□ 1.34
UBXN1-212ENST00000531625 DHX36Q9H2U1 1008 aaKnown RBP23.42■■□□□ 1.34
UBXN1-212ENST00000531625 LRP2BPQ9P2M1 347 aa23.42■■□□□ 1.34
UBXN1-212ENST00000531625 PI4KBQ9UBF8 816 aa23.42■■□□□ 1.34
UBXN1-212ENST00000531625 RPTORQ8N122 1335 aa23.41■■□□□ 1.34
UBXN1-212ENST00000531625 GNAI2P04899 355 aa23.41■■□□□ 1.34
UBXN1-212ENST00000531625 G3BP1Q13283 466 aaKnown RBP eCLIP23.41■■□□□ 1.34
UBXN1-212ENST00000531625 ALPK3Q96L96 1907 aa23.4■■□□□ 1.34
UBXN1-212ENST00000531625 SH3RF3Q8TEJ3 882 aaPredicted RBP23.4■■□□□ 1.34
UBXN1-212ENST00000531625 DIS3LQ8TF46 1054 aaKnown RBP23.4■■□□□ 1.34
UBXN1-212ENST00000531625 NOL10Q9BSC4 688 aaKnown RBP23.4■■□□□ 1.34
UBXN1-212ENST00000531625 HMX1Q9NP08 348 aaPredicted RBP23.4■■□□□ 1.34
UBXN1-212ENST00000531625 IPO8O15397 1037 aaKnown RBP23.39■■□□□ 1.33
UBXN1-212ENST00000531625 BAG3O95817 575 aa23.39■■□□□ 1.33
UBXN1-212ENST00000531625 ASNSP08243 561 aa23.39■■□□□ 1.33
UBXN1-212ENST00000531625 PLCG2P16885 1265 aa23.39■■□□□ 1.33
UBXN1-212ENST00000531625 HOXA7P31268 230 aaPredicted RBP23.39■■□□□ 1.33
UBXN1-212ENST00000531625 BACE1P56817 501 aa23.39■■□□□ 1.33
UBXN1-212ENST00000531625 PPP4CP60510 307 aa23.39■■□□□ 1.33
UBXN1-212ENST00000531625 METTL16Q86W50 562 aaKnown RBP23.39■■□□□ 1.33
UBXN1-212ENST00000531625 STAP2Q9UGK3 403 aa23.39■■□□□ 1.33
UBXN1-212ENST00000531625 PNMA6EA0A0J9YXQ4 647 aa23.38■■□□□ 1.33
UBXN1-212ENST00000531625 GINM1Q9NU53 330 aa23.38■■□□□ 1.33
UBXN1-212ENST00000531625 IGSF3O75054 1194 aa23.37■■□□□ 1.33
UBXN1-212ENST00000531625 TRIM27P14373 513 aa23.37■■□□□ 1.33
UBXN1-212ENST00000531625 BMP8BP34820 402 aa23.37■■□□□ 1.33
UBXN1-212ENST00000531625 IRX3P78415 501 aaPredicted RBP23.37■■□□□ 1.33
UBXN1-212ENST00000531625 MTMR2Q13614 643 aa23.37■■□□□ 1.33
UBXN1-212ENST00000531625 NAA16Q6N069 864 aaPredicted RBP23.37■■□□□ 1.33
UBXN1-212ENST00000531625 FOXP4Q8IVH2 680 aaPredicted RBP23.37■■□□□ 1.33
UBXN1-212ENST00000531625 GDF15Q99988 308 aa23.37■■□□□ 1.33
UBXN1-212ENST00000531625 NBPF3Q9H094 633 aa23.37■■□□□ 1.33
UBXN1-212ENST00000531625 GPR108Q9NPR9 543 aa23.37■■□□□ 1.33
UBXN1-212ENST00000531625 TMOD4Q9NZQ9 345 aa23.37■■□□□ 1.33
UBXN1-212ENST00000531625 SIPA1L1O43166 1804 aa23.36■■□□□ 1.33
UBXN1-212ENST00000531625 C19orf81C9J6K1 198 aa23.36■■□□□ 1.33
UBXN1-212ENST00000531625 SOX1O00570 391 aaPredicted RBP23.36■■□□□ 1.33
UBXN1-212ENST00000531625 XRCC5P13010 732 aaKnown RBP23.36■■□□□ 1.33
UBXN1-212ENST00000531625 MNX1P50219 401 aaPredicted RBP23.36■■□□□ 1.33
UBXN1-212ENST00000531625 TRIM32Q13049 653 aa23.36■■□□□ 1.33
UBXN1-212ENST00000531625 MAP3K21Q5TCX8 1036 aa23.36■■□□□ 1.33
UBXN1-212ENST00000531625 P2RX7Q99572 595 aaKnown RBP23.36■■□□□ 1.33
UBXN1-212ENST00000531625 AATFQ9NY61 560 aaKnown RBP eCLIP23.36■■□□□ 1.33
UBXN1-212ENST00000531625 OGDHLQ9ULD0 1010 aa23.36■■□□□ 1.33
UBXN1-212ENST00000531625 CUL9Q8IWT3 2517 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms