RNA–Protein interactions for RNA: ENST00000528488.5

C11orf49-215, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 1,623 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-215ENST00000528488 GPBP1L1Q9HC44 474 aaPredicted RBP24.06■■□□□ 1.44
C11orf49-215ENST00000528488 PPP2R3BQ9Y5P8 575 aa24.06■■□□□ 1.44
C11orf49-215ENST00000528488 TACC3Q9Y6A5 838 aa24.06■■□□□ 1.44
C11orf49-215ENST00000528488 ZKSCAN1P17029 563 aaPredicted RBP24.05■■□□□ 1.44
C11orf49-215ENST00000528488 RBM25P49756 843 aaKnown RBP24.05■■□□□ 1.44
C11orf49-215ENST00000528488 PI4KBQ9UBF8 816 aa24.05■■□□□ 1.44
C11orf49-215ENST00000528488 PRAMEF18Q5VWM3 479 aa24.04■■□□□ 1.44
C11orf49-215ENST00000528488 STOX1Q6ZVD7 989 aa24.04■■□□□ 1.44
C11orf49-215ENST00000528488 LDHDQ86WU2 507 aa24.04■■□□□ 1.44
C11orf49-215ENST00000528488 INCENPQ9NQS7 918 aa24.04■■□□□ 1.44
C11orf49-215ENST00000528488 E7EWF7 191 aa24.03■■□□□ 1.44
C11orf49-215ENST00000528488 SLC3A2P08195 630 aaKnown RBP24.03■■□□□ 1.44
C11orf49-215ENST00000528488 SLURP2P0DP57 97 aa24.03■■□□□ 1.44
C11orf49-215ENST00000528488 AKNAD1Q5T1N1 836 aa24.03■■□□□ 1.44
C11orf49-215ENST00000528488 USP48Q86UV5 1035 aa24.03■■□□□ 1.44
C11orf49-215ENST00000528488 STAG1Q8WVM7 1258 aa24.03■■□□□ 1.44
C11orf49-215ENST00000528488 EHD4Q9H223 541 aa24.03■■□□□ 1.44
C11orf49-215ENST00000528488 SERPINB13Q9UIV8 391 aa24.03■■□□□ 1.44
C11orf49-215ENST00000528488 TSGA10IPQ3SY00 556 aa24.02■■□□□ 1.44
C11orf49-215ENST00000528488 MAP1SQ66K74 1059 aaPredicted RBP24.02■■□□□ 1.44
C11orf49-215ENST00000528488 DLK2Q6UY11 383 aa24.02■■□□□ 1.44
C11orf49-215ENST00000528488 C16orf86Q6ZW13 317 aa24.02■■□□□ 1.44
C11orf49-215ENST00000528488 SLC44A5Q8NCS7 719 aa24.02■■□□□ 1.44
C11orf49-215ENST00000528488 GLIS2Q9BZE0 524 aaPredicted RBP24.02■■□□□ 1.44
C11orf49-215ENST00000528488 FAM196BA6NMK8 535 aa24.02■■□□□ 1.44
C11orf49-215ENST00000528488 YY1P25490 414 aa24.02■■□□□ 1.44
C11orf49-215ENST00000528488 ANAPC15P60006 121 aa24.02■■□□□ 1.44
C11orf49-215ENST00000528488 GABPAQ06546 454 aa24.02■■□□□ 1.44
C11orf49-215ENST00000528488 ADCK5Q3MIX3 580 aa24.02■■□□□ 1.44
C11orf49-215ENST00000528488 NBPF12Q5TAG4 269 aaPredicted RBP24.02■■□□□ 1.44
C11orf49-215ENST00000528488 MFSD6Q6ZSS7 791 aa24.02■■□□□ 1.44
C11orf49-215ENST00000528488 CRACR2BQ8N4Y2 399 aaPredicted RBP24.02■■□□□ 1.44
C11orf49-215ENST00000528488 NEDD4P46934 1319 aa24.02■■□□□ 1.44
C11orf49-215ENST00000528488 CDC37L1Q7L3B6 337 aa24.01■■□□□ 1.43
C11orf49-215ENST00000528488 FOXP4Q8IVH2 680 aaPredicted RBP24.01■■□□□ 1.43
C11orf49-215ENST00000528488 TRIM34Q9BYJ4 488 aa24.01■■□□□ 1.43
C11orf49-215ENST00000528488 RNF41Q9H4P4 317 aaPredicted RBP24.01■■□□□ 1.43
C11orf49-215ENST00000528488 DNAJC18Q9H819 358 aa24.01■■□□□ 1.43
C11orf49-215ENST00000528488 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.01■■□□□ 1.43
C11orf49-215ENST00000528488 PRDM1O75626 825 aa24■■□□□ 1.43
C11orf49-215ENST00000528488 CDK8P49336 464 aa24■■□□□ 1.43
C11orf49-215ENST00000528488 PDE4BQ07343 736 aa24■■□□□ 1.43
C11orf49-215ENST00000528488 KRT32Q14532 448 aa24■■□□□ 1.43
C11orf49-215ENST00000528488 TOMM22Q9NS69 142 aa24■■□□□ 1.43
C11orf49-215ENST00000528488 RRP12Q5JTH9 1297 aaKnown RBP23.99■■□□□ 1.43
C11orf49-215ENST00000528488 METTL16Q86W50 562 aaKnown RBP23.99■■□□□ 1.43
C11orf49-215ENST00000528488 JAKMIP1Q96N16 626 aaKnown RBP23.99■■□□□ 1.43
C11orf49-215ENST00000528488 SWAP70Q9UH65 585 aa23.99■■□□□ 1.43
C11orf49-215ENST00000528488 SSC5DA1L4H1 1573 aa23.99■■□□□ 1.43
C11orf49-215ENST00000528488 FGRP09769 529 aa23.99■■□□□ 1.43
C11orf49-215ENST00000528488 MIGA2Q7L4E1 593 aa23.99■■□□□ 1.43
C11orf49-215ENST00000528488 IL17RAQ96F46 866 aa23.99■■□□□ 1.43
C11orf49-215ENST00000528488 CDCA5Q96FF9 252 aa23.99■■□□□ 1.43
C11orf49-215ENST00000528488 KIF2CQ99661 725 aa23.99■■□□□ 1.43
C11orf49-215ENST00000528488 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.99■■□□□ 1.43
C11orf49-215ENST00000528488 HERC5Q9UII4 1024 aaKnown RBP23.99■■□□□ 1.43
C11orf49-215ENST00000528488 ATAD5Q96QE3 1844 aa23.98■■□□□ 1.43
C11orf49-215ENST00000528488 ORC4O43929 436 aa23.98■■□□□ 1.43
C11orf49-215ENST00000528488 PCP11498 1178 aaKnown RBP23.98■■□□□ 1.43
C11orf49-215ENST00000528488 SHMT1P34896 483 aa23.98■■□□□ 1.43
C11orf49-215ENST00000528488 NKX2-3Q8TAU0 364 aa23.98■■□□□ 1.43
C11orf49-215ENST00000528488 MKNK2Q9HBH9 465 aa23.98■■□□□ 1.43
C11orf49-215ENST00000528488 B4E1Z4 1266 aa23.97■■□□□ 1.43
C11orf49-215ENST00000528488 KIF3CO14782 793 aa23.97■■□□□ 1.43
C11orf49-215ENST00000528488 TBC1D12O60347 775 aa23.97■■□□□ 1.43
C11orf49-215ENST00000528488 TRDNQ13061 729 aa23.97■■□□□ 1.43
C11orf49-215ENST00000528488 COL9A3Q14050 684 aaPredicted RBP23.97■■□□□ 1.43
C11orf49-215ENST00000528488 NCOA7Q8NI08 942 aa23.97■■□□□ 1.43
C11orf49-215ENST00000528488 NEK1Q96PY6 1258 aa23.97■■□□□ 1.43
C11orf49-215ENST00000528488 CNNM2Q9H8M5 875 aa23.97■■□□□ 1.43
C11orf49-215ENST00000528488 ZNF287Q9HBT7 754 aa23.97■■□□□ 1.43
C11orf49-215ENST00000528488 SUPT20HL1Q3ZLR7 823 aa23.96■■□□□ 1.43
C11orf49-215ENST00000528488 CHADLQ6NUI6 762 aa23.96■■□□□ 1.43
C11orf49-215ENST00000528488 RALYLQ86SE5 291 aaKnown RBP23.96■■□□□ 1.43
C11orf49-215ENST00000528488 HOOK2Q96ED9 719 aa23.96■■□□□ 1.43
C11orf49-215ENST00000528488 KRT23Q9C075 422 aa23.96■■□□□ 1.43
C11orf49-215ENST00000528488 TAOK2Q9UL54 1235 aa23.96■■□□□ 1.43
C11orf49-215ENST00000528488 TRPM7Q96QT4 1865 aa23.96■■□□□ 1.43
C11orf49-215ENST00000528488 CASTP20810 708 aaKnown RBP23.95■■□□□ 1.43
C11orf49-215ENST00000528488 RASA1P20936 1047 aa23.95■■□□□ 1.43
C11orf49-215ENST00000528488 MAP3K10Q02779 954 aa23.95■■□□□ 1.43
C11orf49-215ENST00000528488 GREB1LQ9C091 1923 aaPredicted RBP23.95■■□□□ 1.42
C11orf49-215ENST00000528488 TRAF5O00463 557 aa23.95■■□□□ 1.42
C11orf49-215ENST00000528488 RANBP6O60518 1105 aaKnown RBP23.95■■□□□ 1.42
C11orf49-215ENST00000528488 CPA1P15085 419 aa23.95■■□□□ 1.42
C11orf49-215ENST00000528488 PSMA5P28066 241 aa23.95■■□□□ 1.42
C11orf49-215ENST00000528488 DCAF15Q66K64 600 aa23.95■■□□□ 1.42
C11orf49-215ENST00000528488 MB21D2Q8IYB1 491 aaPredicted RBP23.95■■□□□ 1.42
C11orf49-215ENST00000528488 KDM4AO75164 1064 aa23.94■■□□□ 1.42
C11orf49-215ENST00000528488 TATDN1Q6P1N9 297 aa23.94■■□□□ 1.42
C11orf49-215ENST00000528488 ZNF444Q8N0Y2 327 aaPredicted RBP23.94■■□□□ 1.42
C11orf49-215ENST00000528488 ESR2Q92731 530 aa23.94■■□□□ 1.42
C11orf49-215ENST00000528488 TM6SF1Q9BZW5 370 aa23.94■■□□□ 1.42
C11orf49-215ENST00000528488 OTOFQ9HC10 1997 aa23.94■■□□□ 1.42
C11orf49-215ENST00000528488 FMR1Q06787 632 aaKnown RBP eCLIP23.93■■□□□ 1.42
C11orf49-215ENST00000528488 FAM47AQ5JRC9 791 aa23.93■■□□□ 1.42
C11orf49-215ENST00000528488 BLOC1S2Q6QNY1 142 aa23.93■■□□□ 1.42
C11orf49-215ENST00000528488 ZNF784Q8NCA9 323 aaPredicted RBP23.93■■□□□ 1.42
C11orf49-215ENST00000528488 UPF3BQ9BZI7 483 aaKnown RBP23.93■■□□□ 1.42
C11orf49-215ENST00000528488 FZD1Q9UP38 647 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms