RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 IRF5Q13568 498 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 MVPQ14764 893 aaKnown RBP11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 TREML2Q5T2D2 321 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 ANKRD13CQ8N6S4 541 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 PXYLP1Q8TE99 480 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 ZNF384Q8TF68 577 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 YTHDC1Q96MU7 727 aaKnown RBP11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 DEFB118Q96PH6 123 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 TAOK2Q9UL54 1235 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 AGTPBP1Q9UPW5 1226 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 AKAP2Q9Y2D5 859 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 NR2E3Q9Y5X4 410 aa11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 COL2A1P02458 1487 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC4-206ENST00000525303 TBC1D12O60347 775 aa11.82□□□□□ -0.52
TRAPPC4-206ENST00000525303 TFRCP02786 760 aaKnown RBP11.82□□□□□ -0.52
TRAPPC4-206ENST00000525303 COA7Q96BR5 231 aa11.82□□□□□ -0.52
TRAPPC4-206ENST00000525303 NEUROD6Q96NK8 337 aa11.82□□□□□ -0.52
TRAPPC4-206ENST00000525303 PRO3102Q9H379 93 aa11.82□□□□□ -0.52
TRAPPC4-206ENST00000525303 PNMA3Q9UL41 463 aa11.82□□□□□ -0.52
TRAPPC4-206ENST00000525303 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC4-206ENST00000525303 ZBTB7BO15156 539 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-206ENST00000525303 NPM3O75607 178 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-206ENST00000525303 SPP2Q13103 211 aa11.81□□□□□ -0.52
TRAPPC4-206ENST00000525303 FAM110CQ1W6H9 321 aa11.81□□□□□ -0.52
TRAPPC4-206ENST00000525303 PI16Q6UXB8 463 aa11.81□□□□□ -0.52
TRAPPC4-206ENST00000525303 TBC1D9Q6ZT07 1266 aa11.81□□□□□ -0.52
TRAPPC4-206ENST00000525303 NSUN4Q96CB9 384 aaKnown RBP11.81□□□□□ -0.52
TRAPPC4-206ENST00000525303 OSBPL5Q9H0X9 879 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-206ENST00000525303 PAK6Q9NQU5 681 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-206ENST00000525303 RNF216Q9NWF9 866 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC4-206ENST00000525303 HMG20BQ9P0W2 317 aa11.81□□□□□ -0.52
TRAPPC4-206ENST00000525303 EVI5O60447 810 aa11.8□□□□□ -0.52
TRAPPC4-206ENST00000525303 LDHCP07864 332 aa11.8□□□□□ -0.52
TRAPPC4-206ENST00000525303 GNAI3P08754 354 aa11.8□□□□□ -0.52
TRAPPC4-206ENST00000525303 GSTO1P78417 241 aa11.8□□□□□ -0.52
TRAPPC4-206ENST00000525303 MTX1Q13505 466 aa11.8□□□□□ -0.52
TRAPPC4-206ENST00000525303 GORABQ5T7V8 394 aa11.8□□□□□ -0.52
TRAPPC4-206ENST00000525303 SPATA5Q8NB90 893 aa11.8□□□□□ -0.52
TRAPPC4-206ENST00000525303 PROCA1Q8NCQ7 364 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC4-206ENST00000525303 ZNF280CQ8ND82 737 aa11.8□□□□□ -0.52
TRAPPC4-206ENST00000525303 RAI14Q9P0K7 980 aa11.8□□□□□ -0.52
TRAPPC4-206ENST00000525303 MYH8P13535 1937 aa11.8□□□□□ -0.52
TRAPPC4-206ENST00000525303 MAP4K4O95819 1239 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC4-206ENST00000525303 ARID4AP29374 1257 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC4-206ENST00000525303 CAP2P40123 477 aa11.79□□□□□ -0.52
TRAPPC4-206ENST00000525303 GCLCP48506 637 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC4-206ENST00000525303 RARSP54136 660 aaKnown RBP11.79□□□□□ -0.52
TRAPPC4-206ENST00000525303 HMGCS2P54868 508 aa11.79□□□□□ -0.52
TRAPPC4-206ENST00000525303 RRP1BQ14684 758 aaKnown RBP11.79□□□□□ -0.52
TRAPPC4-206ENST00000525303 PAWRQ96IZ0 340 aaKnown RBP11.79□□□□□ -0.52
TRAPPC4-206ENST00000525303 CRISPLD2Q9H0B8 497 aa11.79□□□□□ -0.52
TRAPPC4-206ENST00000525303 CAPN2P17655 700 aa11.78□□□□□ -0.52
TRAPPC4-206ENST00000525303 MCAMP43121 646 aa11.78□□□□□ -0.52
TRAPPC4-206ENST00000525303 PABPC4Q13310 644 aaKnown RBP eCLIP11.78□□□□□ -0.528e-8■■■■□ 23
TRAPPC4-206ENST00000525303 TEX11Q8IYF3 940 aa11.78□□□□□ -0.52
TRAPPC4-206ENST00000525303 SH3RF3Q8TEJ3 882 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-206ENST00000525303 DIS3LQ8TF46 1054 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-206ENST00000525303 ARHGAP45Q92619 1136 aa11.78□□□□□ -0.52
TRAPPC4-206ENST00000525303 TBC1D2Q9BYX2 928 aa11.78□□□□□ -0.52
TRAPPC4-206ENST00000525303 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRAPPC4-206ENST00000525303 ASCC2Q9H1I8 757 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-206ENST00000525303 DNAH12Q6ZR08 3092 aa11.78□□□□□ -0.52
TRAPPC4-206ENST00000525303 A0A1W2PPC1 479 aa11.77□□□□□ -0.53
TRAPPC4-206ENST00000525303 USP17L5A8MUK1 530 aa11.77□□□□□ -0.53
TRAPPC4-206ENST00000525303 HMGCRP04035 888 aa11.77□□□□□ -0.53
TRAPPC4-206ENST00000525303 SH3D19Q5HYK7 790 aa11.77□□□□□ -0.53
TRAPPC4-206ENST00000525303 NECAB2Q7Z6G3 386 aa11.77□□□□□ -0.53
TRAPPC4-206ENST00000525303 RNF39Q9H2S5 420 aa11.77□□□□□ -0.53
TRAPPC4-206ENST00000525303 AS3MTQ9HBK9 375 aa11.77□□□□□ -0.53
TRAPPC4-206ENST00000525303 LRP2BPQ9P2M1 347 aa11.77□□□□□ -0.53
TRAPPC4-206ENST00000525303 STAP2Q9UGK3 403 aa11.77□□□□□ -0.53
TRAPPC4-206ENST00000525303 HERC5Q9UII4 1024 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-206ENST00000525303 PNMA6EA0A0J9YXQ4 647 aa11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 SOX1O00570 391 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 GNAI2P04899 355 aa11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 TRIM32Q13049 653 aa11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 G3BP1Q13283 466 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 MTMR2Q13614 643 aa11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 NOL10Q9BSC4 688 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 HMX1Q9NP08 348 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 AATFQ9NY61 560 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 PI4KBQ9UBF8 816 aa11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 GJD2Q9UKL4 321 aa11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 TNNQ9UQP3 1299 aa11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 NAV1Q8NEY1 1877 aa11.76□□□□□ -0.53
TRAPPC4-206ENST00000525303 PEX10O60683 326 aa11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 UQCRFS1P1P0C7P4 283 aa11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 TRIM27P14373 513 aa11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 BACE1P56817 501 aa11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 IRX3P78415 501 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 NAA16Q6N069 864 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 C7orf61Q8IZ16 206 aa11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 ANKLE1Q8NAG6 615 aa11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 LRCH3Q96II8 777 aa11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 WDR18Q9BV38 432 aa11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 DHX36Q9H2U1 1008 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 SNRKQ9NRH2 765 aa11.75□□□□□ -0.53
TRAPPC4-206ENST00000525303 MORF4L1Q9UBU8 362 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms