RNA–Protein interactions for RNA: ENST00000524157.2

SPIDR-226, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 267 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-226ENST00000524157 ADAMTSL4Q6UY14 1074 aa7.15□□□□□ -1.26
SPIDR-226ENST00000524157 NLRC3Q7RTR2 1065 aa7.15□□□□□ -1.26
SPIDR-226ENST00000524157 VN1R5Q7Z5H4 357 aa7.15□□□□□ -1.26
SPIDR-226ENST00000524157 RAB44Q7Z6P3 723 aaPredicted RBP7.15□□□□□ -1.26
SPIDR-226ENST00000524157 PDZD3Q86UT5 571 aa7.15□□□□□ -1.26
SPIDR-226ENST00000524157 RIN3Q8TB24 985 aa7.15□□□□□ -1.26
SPIDR-226ENST00000524157 KISS1RQ969F8 398 aaPredicted RBP7.15□□□□□ -1.26
SPIDR-226ENST00000524157 CDC6Q99741 560 aa7.15□□□□□ -1.26
SPIDR-226ENST00000524157 NUCKS1Q9H1E3 243 aaKnown RBP7.15□□□□□ -1.26
SPIDR-226ENST00000524157 INTS7Q9NVH2 962 aaKnown RBP7.15□□□□□ -1.26
SPIDR-226ENST00000524157 SNCAIPQ9Y6H5 919 aa7.15□□□□□ -1.26
SPIDR-226ENST00000524157 EIF4EBP3O60516 100 aaPredicted RBP7.14□□□□□ -1.27
SPIDR-226ENST00000524157 GSTP1P09211 210 aaKnown RBP7.14□□□□□ -1.27
SPIDR-226ENST00000524157 NAT2P11245 290 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 ESRRAP11474 423 aaPredicted RBP7.14□□□□□ -1.27
SPIDR-226ENST00000524157 ZNF143P52747 638 aaPredicted RBP7.14□□□□□ -1.27
SPIDR-226ENST00000524157 HDAC1Q13547 482 aaPredicted RBP7.14□□□□□ -1.27
SPIDR-226ENST00000524157 MAP7Q14244 749 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 LAPTM4AQ15012 233 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 AXDND1Q5T1B0 1012 aaPredicted RBP7.14□□□□□ -1.27
SPIDR-226ENST00000524157 RIPOR1Q6ZS17 1223 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 HFE2Q6ZVN8 426 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 TRIM46Q7Z4K8 759 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 MICALL1Q8N3F8 863 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 ATG4CQ96DT6 458 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 DHRS4Q9BTZ2 278 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 MRPL4Q9BYD3 311 aaKnown RBP7.14□□□□□ -1.27
SPIDR-226ENST00000524157 LTBP3Q9NS15 1303 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 CACNA2D2Q9NY47 1150 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 REV1Q9UBZ9 1251 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 DACH1Q9UI36 760 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 TACC3Q9Y6A5 838 aa7.14□□□□□ -1.27
SPIDR-226ENST00000524157 ZBTB42B2RXF5 422 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 GFRA2O00451 464 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 NRG2O14511 850 aaPredicted RBP7.13□□□□□ -1.27
SPIDR-226ENST00000524157 AXIN1O15169 862 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 CREB3O43889 395 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 BNIP3LO60238 219 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 RAPGEF3O95398 923 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 KRT18P05783 430 aaKnown RBP7.13□□□□□ -1.27
SPIDR-226ENST00000524157 ACRP10323 421 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 ARAFP10398 606 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 PDE4BQ07343 736 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 OS9Q13438 667 aaPredicted RBP7.13□□□□□ -1.27
SPIDR-226ENST00000524157 UBAP2LQ14157 1087 aaKnown RBP7.13□□□□□ -1.27
SPIDR-226ENST00000524157 ZYXQ15942 572 aaKnown RBP7.13□□□□□ -1.27
SPIDR-226ENST00000524157 WIPI1Q5MNZ9 446 aaPredicted RBP7.13□□□□□ -1.27
SPIDR-226ENST00000524157 FAM182BQ5T319 152 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 CDCP2Q5VXM1 449 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 HDXQ7Z353 690 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 NECAB2Q7Z6G3 386 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 PPM1KQ8N3J5 372 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 UBR7Q8N806 425 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 ACSBG1Q96GR2 724 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 EXOC2Q96KP1 924 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 APBA2Q99767 749 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 ADAM19Q9H013 955 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 NDFIP2Q9NV92 336 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 PCDHA4Q9UN74 947 aa7.13□□□□□ -1.27
SPIDR-226ENST00000524157 MRPS23Q9Y3D9 190 aaKnown RBP7.13□□□□□ -1.27
SPIDR-226ENST00000524157 TRAV20A0A0B4J274 112 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 SLC22A31A6NKX4 558 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 THBS1P07996 1170 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 CD33P20138 364 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 L1CAMP32004 1257 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 CCNFP41002 786 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 MCL1Q07820 350 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 BBS9Q3SYG4 887 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 MAP9Q49MG5 647 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 PKDCCQ504Y2 493 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 DDX46Q7L014 1031 aaKnown RBP7.12□□□□□ -1.27
SPIDR-226ENST00000524157 LRRTM3Q86VH5 581 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 AHI1Q8N157 1196 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 KLHL6Q8WZ60 621 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 ZFP42Q96MM3 310 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 TARS2Q9BW92 718 aaKnown RBP7.12□□□□□ -1.27
SPIDR-226ENST00000524157 CNNM2Q9H8M5 875 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 ATXN7L1Q9ULK2 861 aaPredicted RBP7.12□□□□□ -1.27
SPIDR-226ENST00000524157 PCDHB10Q9UN67 800 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 COMMD10Q9Y6G5 202 aa7.12□□□□□ -1.27
SPIDR-226ENST00000524157 SENP3-EIF4A1A0A087X0R7 540 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 PLCG1P19174 1290 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 CABP4P57796 275 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 IKBKEQ14164 716 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 HSP90AA2PQ14568 343 aaPredicted RBP7.11□□□□□ -1.27
SPIDR-226ENST00000524157 GNPTABQ3T906 1256 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 CNNM4Q6P4Q7 775 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 TSHZ1Q6ZSZ6 1077 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 SCUBE1Q8IWY4 988 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 ABHD17AQ96GS6 310 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 SLC9A7Q96T83 725 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 ASPSCR1Q9BZE9 553 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 UBE2OQ9C0C9 1292 aaKnown RBP7.11□□□□□ -1.27
SPIDR-226ENST00000524157 PRDM16Q9HAZ2 1276 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 DNAJB12Q9NXW2 375 aaKnown RBP7.11□□□□□ -1.27
SPIDR-226ENST00000524157 DNMT3LQ9UJW3 386 aa7.11□□□□□ -1.27
SPIDR-226ENST00000524157 ZNF214Q9UL59 606 aaPredicted RBP7.11□□□□□ -1.27
SPIDR-226ENST00000524157 TRBV23-1A0A0A0MS06 115 aa7.1□□□□□ -1.27
SPIDR-226ENST00000524157 E2F8A0AVK6 867 aa7.1□□□□□ -1.27
SPIDR-226ENST00000524157 SHTN1A0MZ66 631 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms