RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 HMGCS2P54868 508 aa32■■■□□ 2.71
PVT1-219ENST00000523427 GSTO1P78417 241 aa32■■■□□ 2.71
PVT1-219ENST00000523427 RANBP2P49792 3224 aaKnown RBP32■■■□□ 2.71
PVT1-219ENST00000523427 PTPRFP10586 1907 aa31.99■■■□□ 2.71
PVT1-219ENST00000523427 ZNF280CQ8ND82 737 aa31.99■■■□□ 2.71
PVT1-219ENST00000523427 NSUN4Q96CB9 384 aaKnown RBP31.99■■■□□ 2.71
PVT1-219ENST00000523427 PAWRQ96IZ0 340 aaKnown RBP31.99■■■□□ 2.71
PVT1-219ENST00000523427 OSBPL5Q9H0X9 879 aaPredicted RBP31.99■■■□□ 2.71
PVT1-219ENST00000523427 SZT2Q5T011 3432 aa31.99■■■□□ 2.71
PVT1-219ENST00000523427 PHIPQ8WWQ0 1821 aa31.98■■■□□ 2.71
PVT1-219ENST00000523427 RRP1BQ14684 758 aaKnown RBP31.98■■■□□ 2.71
PVT1-219ENST00000523427 FAM110CQ1W6H9 321 aa31.98■■■□□ 2.71
PVT1-219ENST00000523427 TEX11Q8IYF3 940 aa31.98■■■□□ 2.71
PVT1-219ENST00000523427 PROCA1Q8NCQ7 364 aaPredicted RBP31.98■■■□□ 2.71
PVT1-219ENST00000523427 RARSP54136 660 aaKnown RBP31.97■■■□□ 2.71
PVT1-219ENST00000523427 PRO3102Q9H379 93 aa31.97■■■□□ 2.71
PVT1-219ENST00000523427 PAK6Q9NQU5 681 aaPredicted RBP31.97■■■□□ 2.71
PVT1-219ENST00000523427 LRP2BPQ9P2M1 347 aa31.97■■■□□ 2.71
PVT1-219ENST00000523427 DOCK3Q8IZD9 2030 aa31.97■■■□□ 2.71
PVT1-219ENST00000523427 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.96■■■□□ 2.714e-6■■■□□ 17.4
PVT1-219ENST00000523427 NPM3O75607 178 aaKnown RBP31.95■■■□□ 2.71
PVT1-219ENST00000523427 CAP2P40123 477 aa31.95■■■□□ 2.71
PVT1-219ENST00000523427 DIS3LQ8TF46 1054 aaKnown RBP31.95■■■□□ 2.71
PVT1-219ENST00000523427 ASCC2Q9H1I8 757 aaPredicted RBP31.95■■■□□ 2.71
PVT1-219ENST00000523427 STAP2Q9UGK3 403 aa31.95■■■□□ 2.71
PVT1-219ENST00000523427 USP17L5A8MUK1 530 aa31.94■■■□□ 2.7
PVT1-219ENST00000523427 GCLCP48506 637 aaPredicted RBP31.94■■■□□ 2.7
PVT1-219ENST00000523427 G3BP1Q13283 466 aaKnown RBP eCLIP31.94■■■□□ 2.7
PVT1-219ENST00000523427 PABPC4Q13310 644 aaKnown RBP eCLIP31.94■■■□□ 2.7
PVT1-219ENST00000523427 SH3RF3Q8TEJ3 882 aaPredicted RBP31.94■■■□□ 2.7
PVT1-219ENST00000523427 NOL10Q9BSC4 688 aaKnown RBP31.94■■■□□ 2.7
PVT1-219ENST00000523427 MTX1Q13505 466 aa31.93■■■□□ 2.7
PVT1-219ENST00000523427 CRISPLD2Q9H0B8 497 aa31.93■■■□□ 2.7
PVT1-219ENST00000523427 SNRKQ9NRH2 765 aa31.93■■■□□ 2.7
PVT1-219ENST00000523427 MCAMP43121 646 aa31.92■■■□□ 2.7
PVT1-219ENST00000523427 TRIM32Q13049 653 aa31.92■■■□□ 2.7
PVT1-219ENST00000523427 NECAB2Q7Z6G3 386 aa31.92■■■□□ 2.7
PVT1-219ENST00000523427 TNNQ9UQP3 1299 aa31.92■■■□□ 2.7
PVT1-219ENST00000523427 MAP4K4O95819 1239 aaPredicted RBP31.91■■■□□ 2.7
PVT1-219ENST00000523427 AS3MTQ9HBK9 375 aa31.91■■■□□ 2.7
PVT1-219ENST00000523427 AATFQ9NY61 560 aaKnown RBP eCLIP31.91■■■□□ 2.7
PVT1-219ENST00000523427 PNMA6EA0A0J9YXQ4 647 aa31.9■■■□□ 2.7
PVT1-219ENST00000523427 HMGCRP04035 888 aa31.9■■■□□ 2.7
PVT1-219ENST00000523427 GNAI2P04899 355 aa31.9■■■□□ 2.7
PVT1-219ENST00000523427 ARID4AP29374 1257 aaPredicted RBP31.9■■■□□ 2.7
PVT1-219ENST00000523427 ARHGAP45Q92619 1136 aa31.9■■■□□ 2.7
PVT1-219ENST00000523427 FRAT1Q92837 279 aaPredicted RBP31.9■■■□□ 2.7
PVT1-219ENST00000523427 PEX10O60683 326 aa31.89■■■□□ 2.7
PVT1-219ENST00000523427 IRX3P78415 501 aaPredicted RBP31.89■■■□□ 2.7
PVT1-219ENST00000523427 MTMR2Q13614 643 aa31.89■■■□□ 2.7
PVT1-219ENST00000523427 C7orf61Q8IZ16 206 aa31.89■■■□□ 2.7
PVT1-219ENST00000523427 CLUAP1Q96AJ1 413 aa31.89■■■□□ 2.7
PVT1-219ENST00000523427 TBC1D2Q9BYX2 928 aa31.89■■■□□ 2.7
PVT1-219ENST00000523427 GJD2Q9UKL4 321 aa31.89■■■□□ 2.7
PVT1-219ENST00000523427 UQCRFS1P1P0C7P4 283 aa31.88■■■□□ 2.69
PVT1-219ENST00000523427 CYP2B6P20813 491 aa31.88■■■□□ 2.69
PVT1-219ENST00000523427 NAA16Q6N069 864 aaPredicted RBP31.88■■■□□ 2.69
PVT1-219ENST00000523427 MAPKAPK5Q8IW41 473 aa31.88■■■□□ 2.69
PVT1-219ENST00000523427 HMX1Q9NP08 348 aaPredicted RBP31.88■■■□□ 2.69
PVT1-219ENST00000523427 PI4KBQ9UBF8 816 aa31.88■■■□□ 2.69
PVT1-219ENST00000523427 HERC5Q9UII4 1024 aaKnown RBP31.88■■■□□ 2.69
PVT1-219ENST00000523427 ZMYND8Q9ULU4 1186 aaPredicted RBP31.88■■■□□ 2.69
PVT1-219ENST00000523427 SOX1O00570 391 aaPredicted RBP31.87■■■□□ 2.69
PVT1-219ENST00000523427 TGFBRAP1Q8WUH2 860 aa31.87■■■□□ 2.69
PVT1-219ENST00000523427 LRCH3Q96II8 777 aa31.87■■■□□ 2.69
PVT1-219ENST00000523427 TMOD4Q9NZQ9 345 aa31.87■■■□□ 2.69
PVT1-219ENST00000523427 BAG3O95817 575 aa31.86■■■□□ 2.69
PVT1-219ENST00000523427 CAPN2P17655 700 aa31.86■■■□□ 2.69
PVT1-219ENST00000523427 SH3D19Q5HYK7 790 aa31.86■■■□□ 2.69
PVT1-219ENST00000523427 TTC39AQ5SRH9 613 aa31.86■■■□□ 2.69
PVT1-219ENST00000523427 CRACR2BQ8N4Y2 399 aaPredicted RBP31.86■■■□□ 2.69
PVT1-219ENST00000523427 P2RX7Q99572 595 aaKnown RBP31.86■■■□□ 2.69
PVT1-219ENST00000523427 TRIM34Q9BYJ4 488 aa31.86■■■□□ 2.69
PVT1-219ENST00000523427 RPTORQ8N122 1335 aa31.85■■■□□ 2.69
PVT1-219ENST00000523427 JAG1P78504 1218 aa31.85■■■□□ 2.69
PVT1-219ENST00000523427 SHROOM1Q2M3G4 852 aaPredicted RBP31.85■■■□□ 2.69
PVT1-219ENST00000523427 COL2A1P02458 1487 aaPredicted RBP31.84■■■□□ 2.69
PVT1-219ENST00000523427 IPO8O15397 1037 aaKnown RBP31.84■■■□□ 2.69
PVT1-219ENST00000523427 GDF11O95390 407 aa31.84■■■□□ 2.69
PVT1-219ENST00000523427 TRIM27P14373 513 aa31.84■■■□□ 2.69
PVT1-219ENST00000523427 OS9Q13438 667 aaPredicted RBP31.84■■■□□ 2.69
PVT1-219ENST00000523427 DHX36Q9H2U1 1008 aaKnown RBP31.84■■■□□ 2.69
PVT1-219ENST00000523427 ATAD5Q96QE3 1844 aa31.84■■■□□ 2.69
PVT1-219ENST00000523427 BACE1P56817 501 aa31.83■■■□□ 2.69
PVT1-219ENST00000523427 TRIB2Q92519 343 aa31.83■■■□□ 2.69
PVT1-219ENST00000523427 WDR18Q9BV38 432 aa31.83■■■□□ 2.69
PVT1-219ENST00000523427 SAP30BPQ9UHR5 308 aaKnown RBP31.83■■■□□ 2.69
PVT1-219ENST00000523427 PALD1Q9ULE6 856 aa31.83■■■□□ 2.69
PVT1-219ENST00000523427 LOC285556D6RIA3 1793 aa31.83■■■□□ 2.69
PVT1-219ENST00000523427 A0A1W2PPC1 479 aa31.82■■■□□ 2.68
PVT1-219ENST00000523427 BCAR3O75815 825 aa31.82■■■□□ 2.68
PVT1-219ENST00000523427 ASNSP08243 561 aa31.82■■■□□ 2.68
PVT1-219ENST00000523427 DBNDD2Q9BQY9 259 aa31.82■■■□□ 2.68
PVT1-219ENST00000523427 NBPF3Q9H094 633 aa31.82■■■□□ 2.68
PVT1-219ENST00000523427 MORF4L1Q9UBU8 362 aa31.82■■■□□ 2.68
PVT1-219ENST00000523427 SYN1P17600 705 aa31.81■■■□□ 2.68
PVT1-219ENST00000523427 CCDC158Q5M9N0 1113 aa31.81■■■□□ 2.68
PVT1-219ENST00000523427 ADGRA1Q86SQ6 560 aa31.81■■■□□ 2.68
PVT1-219ENST00000523427 ANKLE1Q8NAG6 615 aa31.81■■■□□ 2.68
PVT1-219ENST00000523427 SLC17A8Q8NDX2 589 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms