RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 SLC1A4P43007 532 aa14.83□□□□□ -0.04
PCDHGB1-201ENST00000523390 DYNLL1P63167 89 aaKnown RBP14.83□□□□□ -0.04
PCDHGB1-201ENST00000523390 SCRN1Q12765 414 aa14.83□□□□□ -0.04
PCDHGB1-201ENST00000523390 C2CD5Q86YS7 1000 aa14.83□□□□□ -0.04
PCDHGB1-201ENST00000523390 CERS3Q8IU89 383 aa14.83□□□□□ -0.04
PCDHGB1-201ENST00000523390 CASQ1P31415 396 aa14.83□□□□□ -0.04
PCDHGB1-201ENST00000523390 SSR1P43307 286 aaKnown RBP14.83□□□□□ -0.04
PCDHGB1-201ENST00000523390 CYP19A1P11511 503 aaPredicted RBP14.83□□□□□ -0.04
PCDHGB1-201ENST00000523390 PAXIP1Q6ZW49 1069 aaPredicted RBP14.83□□□□□ -0.04
PCDHGB1-201ENST00000523390 FANCBQ8NB91 859 aa14.83□□□□□ -0.04
PCDHGB1-201ENST00000523390 TEKT1Q969V4 418 aa14.83□□□□□ -0.04
PCDHGB1-201ENST00000523390 UIMC1Q96RL1 719 aa14.83□□□□□ -0.04
PCDHGB1-201ENST00000523390 ERLIN1O75477 346 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 ZNF202O95125 648 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 ARID4AP29374 1257 aaPredicted RBP14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 GNG11P61952 73 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 RASGRF1Q13972 1273 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 PPP2R5BQ15173 497 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 STXBP4Q6ZWJ1 553 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 MYO6Q9UM54 1294 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 CDR1P51861 262 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 NOLC1Q14978 699 aaKnown RBP eCLIP14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 ZSCAN10Q96SZ4 725 aaPredicted RBP14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 TECPR2O15040 1411 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 AKR1B10O60218 316 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 BTDP43251 543 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 VWDEQ8N2E2 1590 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 XDHP47989 1333 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 USO1O60763 962 aaKnown RBP14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 ZNF445P59923 1031 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 FLAD1Q8NFF5 587 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 PIH1D3Q9NQM4 214 aaKnown RBP14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 CLEC11AQ9Y240 323 aa14.82□□□□□ -0.04
PCDHGB1-201ENST00000523390 MROH2AA6NES4 1674 aa14.81□□□□□ -0.04
PCDHGB1-201ENST00000523390 CUTAO60888 179 aa14.81□□□□□ -0.04
PCDHGB1-201ENST00000523390 LARGE1O95461 756 aa14.81□□□□□ -0.04
PCDHGB1-201ENST00000523390 MYL5Q02045 173 aa14.81□□□□□ -0.04
PCDHGB1-201ENST00000523390 STAMQ92783 540 aa14.81□□□□□ -0.04
PCDHGB1-201ENST00000523390 PKD2L1Q9P0L9 805 aa14.81□□□□□ -0.04
PCDHGB1-201ENST00000523390 MAPK8IP1Q9UQF2 711 aa14.81□□□□□ -0.04
PCDHGB1-201ENST00000523390 TXKP42681 527 aa14.81□□□□□ -0.04
PCDHGB1-201ENST00000523390 PDCL2Q8N4E4 241 aa14.81□□□□□ -0.04
PCDHGB1-201ENST00000523390 CTAGE1Q96RT6 745 aa14.81□□□□□ -0.04
PCDHGB1-201ENST00000523390 LCORLQ8N3X6 602 aa14.81□□□□□ -0.04
PCDHGB1-201ENST00000523390 PNMA1Q8ND90 353 aa14.81□□□□□ -0.04
PCDHGB1-201ENST00000523390 MCAMP43121 646 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 CETN1Q12798 172 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 CCNT1O60563 726 aaKnown RBP14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 WDHD1O75717 1129 aaPredicted RBP14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 NECTIN1Q15223 517 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 DLGAP5Q15398 846 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 ZSWIM4Q9H7M6 989 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 BTBD18B2RXH4 712 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 FAM193AP78312 1265 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 SP4Q02446 784 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 SPATA31D1Q6ZQQ2 1576 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 GOLGA8HP0CJ92 632 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 SPAG5Q96R06 1193 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 ZBTB21Q9ULJ3 1066 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 ZMYM6O95789 1325 aa14.8□□□□□ -0.04
PCDHGB1-201ENST00000523390 RPS6KA4O75676 772 aa14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 CUL4AQ13619 759 aa14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 IQCEQ6IPM2 695 aa14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 ISCA1Q9BUE6 129 aa14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 LEMD3Q9Y2U8 911 aa14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 ECM2O94769 699 aaPredicted RBP14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 NONOQ15233 471 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 APOA5Q6Q788 366 aa14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 GPR101Q96P66 508 aaPredicted RBP14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 CBX8Q9HC52 389 aa14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 ARHGEF10LQ9HCE6 1279 aa14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 RDXP35241 583 aaKnown RBP14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 CEP135Q66GS9 1140 aa14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 SMIM5Q71RC9 77 aa14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 SUPT20HQ8NEM7 779 aa14.79□□□□□ -0.04
PCDHGB1-201ENST00000523390 CBX1P83916 185 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 CLEC4GQ6UXB4 293 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 NIM1KQ8IY84 436 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 CENPHQ9H3R5 247 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 GPHNQ9NQX3 736 aaPredicted RBP14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 AFF2P51816 1311 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 CYP2D7A0A087X1C5 515 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 TMEM131LA2VDJ0 1609 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 FBXO18Q8NFZ0 1043 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 SH2D4AQ9H788 454 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 MED23Q9ULK4 1368 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 DIXDC1Q155Q3 683 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 USH1GQ495M9 461 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 LRRC47Q8N1G4 583 aaKnown RBP14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 BICD1Q96G01 975 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 PRKG1Q13976 671 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 CPXCR1Q8N123 301 aa14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.78□□□□□ -0.04
PCDHGB1-201ENST00000523390 NR1I2O75469 434 aa14.77□□□□□ -0.04
PCDHGB1-201ENST00000523390 NOSTRINQ8IVI9 506 aa14.77□□□□□ -0.04
PCDHGB1-201ENST00000523390 GPT2Q8TD30 523 aa14.77□□□□□ -0.04
PCDHGB1-201ENST00000523390 ATP8A2Q9NTI2 1148 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms