RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 GMPSP49915 693 aaPredicted RBP8.14□□□□□ -1.11
PABPC1-220ENST00000522658 LMOD3Q0VAK6 560 aa8.14□□□□□ -1.11
PABPC1-220ENST00000522658 NOGQ13253 232 aa8.14□□□□□ -1.11
PABPC1-220ENST00000522658 DGKZQ13574 1117 aa8.14□□□□□ -1.11
PABPC1-220ENST00000522658 PLA2G4EQ3MJ16 856 aa8.14□□□□□ -1.11
PABPC1-220ENST00000522658 TTLL7Q6ZT98 887 aa8.14□□□□□ -1.11
PABPC1-220ENST00000522658 BEND7Q8N7W2 519 aaPredicted RBP8.14□□□□□ -1.11
PABPC1-220ENST00000522658 ZNRF3Q9ULT6 936 aa8.14□□□□□ -1.11
PABPC1-220ENST00000522658 ABCC4O15439 1325 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 A0A1B0GTH6 734 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 APBB1O00213 710 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 RAD17O75943 681 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 NTSR2O95665 410 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 EIF2S2P20042 333 aaKnown RBP8.13□□□□□ -1.11
PABPC1-220ENST00000522658 PPP2R1AP30153 589 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 HUNKP57058 714 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 TSGA10IPQ3SY00 556 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 SUSD4Q5VX71 490 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 CDC37L1Q7L3B6 337 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 TMC4Q7Z404 712 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 SAPCD2Q86UD0 394 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 NEDD1Q8NHV4 660 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 HHIPL1Q96JK4 782 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 ZSCAN10Q96SZ4 725 aaPredicted RBP8.13□□□□□ -1.11
PABPC1-220ENST00000522658 GLIS2Q9BZE0 524 aaPredicted RBP8.13□□□□□ -1.11
PABPC1-220ENST00000522658 MCOLN1Q9GZU1 580 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 ATP6V0A2Q9Y487 856 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 NUP98P52948 1817 aa8.13□□□□□ -1.11
PABPC1-220ENST00000522658 KDM3BQ7LBC6 1761 aa8.12□□□□□ -1.11
PABPC1-220ENST00000522658 LTBP1Q14766 1721 aa8.12□□□□□ -1.11
PABPC1-220ENST00000522658 BBOX1O75936 387 aa8.12□□□□□ -1.11
PABPC1-220ENST00000522658 MAP2K3P46734 347 aa8.12□□□□□ -1.11
PABPC1-220ENST00000522658 EIF4A1P60842 406 aaKnown RBP8.12□□□□□ -1.11
PABPC1-220ENST00000522658 FMR1Q06787 632 aaKnown RBP eCLIP8.12□□□□□ -1.11
PABPC1-220ENST00000522658 CXCL9Q07325 125 aa8.12□□□□□ -1.11
PABPC1-220ENST00000522658 KIAA2012Q0VF49 1180 aa8.12□□□□□ -1.11
PABPC1-220ENST00000522658 NFE2L2Q16236 605 aa8.12□□□□□ -1.11
PABPC1-220ENST00000522658 C1orf229Q6ZS94 237 aaPredicted RBP8.12□□□□□ -1.11
PABPC1-220ENST00000522658 C2orf69Q8N8R5 385 aa8.12□□□□□ -1.11
PABPC1-220ENST00000522658 DCPSQ96C86 337 aaKnown RBP8.12□□□□□ -1.11
PABPC1-220ENST00000522658 EYA3Q99504 573 aa8.12□□□□□ -1.11
PABPC1-220ENST00000522658 OXCT2Q9BYC2 517 aaPredicted RBP8.12□□□□□ -1.11
PABPC1-220ENST00000522658 TRMT112Q9UI30 125 aaKnown RBP8.12□□□□□ -1.11
PABPC1-220ENST00000522658 NSFL1CQ9UNZ2 370 aaKnown RBP8.12□□□□□ -1.11
PABPC1-220ENST00000522658 SNED1Q8TER0 1413 aa8.12□□□□□ -1.11
PABPC1-220ENST00000522658 SH3TC1Q8TE82 1336 aa8.11□□□□□ -1.11
PABPC1-220ENST00000522658 MYCP01106 439 aaPredicted RBP8.11□□□□□ -1.11
PABPC1-220ENST00000522658 PHKA2P46019 1235 aa8.11□□□□□ -1.11
PABPC1-220ENST00000522658 AIMP1Q12904 312 aaKnown RBP8.11□□□□□ -1.11
PABPC1-220ENST00000522658 GRAPQ13588 217 aa8.11□□□□□ -1.11
PABPC1-220ENST00000522658 LBRQ14739 615 aaKnown RBP8.11□□□□□ -1.11
PABPC1-220ENST00000522658 C4orf17Q53FE4 359 aa8.11□□□□□ -1.11
PABPC1-220ENST00000522658 CST9Q5W186 159 aa8.11□□□□□ -1.11
PABPC1-220ENST00000522658 KRT26Q7Z3Y9 468 aa8.11□□□□□ -1.11
PABPC1-220ENST00000522658 ZNF34Q8IZ26 560 aa8.11□□□□□ -1.11
PABPC1-220ENST00000522658 GRAPLQ8TC17 118 aaPredicted RBP8.11□□□□□ -1.11
PABPC1-220ENST00000522658 GPAMQ9HCL2 828 aa8.11□□□□□ -1.11
PABPC1-220ENST00000522658 CNOT7Q9UIV1 285 aaKnown RBP8.11□□□□□ -1.11
PABPC1-220ENST00000522658 COL4A5P29400 1685 aa8.11□□□□□ -1.11
PABPC1-220ENST00000522658 HCLS1P14317 486 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-220ENST00000522658 HSP90B1P14625 803 aaKnown RBP8.1□□□□□ -1.11
PABPC1-220ENST00000522658 ZNF157P51786 506 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-220ENST00000522658 IRF5Q13568 498 aa8.1□□□□□ -1.11
PABPC1-220ENST00000522658 WASHC4Q2M389 1173 aa8.1□□□□□ -1.11
PABPC1-220ENST00000522658 PODNQ7Z5L7 613 aa8.1□□□□□ -1.11
PABPC1-220ENST00000522658 USP48Q86UV5 1035 aa8.1□□□□□ -1.11
PABPC1-220ENST00000522658 SP8Q8IXZ3 490 aa8.1□□□□□ -1.11
PABPC1-220ENST00000522658 THUMPD2Q9BTF0 503 aaKnown RBP8.1□□□□□ -1.11
PABPC1-220ENST00000522658 GBA2Q9HCG7 927 aaPredicted RBP8.1□□□□□ -1.11
PABPC1-220ENST00000522658 SHISA8B8ZZ34 492 aa8.09□□□□□ -1.11
PABPC1-220ENST00000522658 STAU1O95793 577 aaKnown RBP8.09□□□□□ -1.11
PABPC1-220ENST00000522658 RPS12P25398 132 aaKnown RBP8.09□□□□□ -1.11
PABPC1-220ENST00000522658 SNRPNP63162 240 aaKnown RBP8.09□□□□□ -1.11
PABPC1-220ENST00000522658 RGMBQ6NW40 437 aa8.09□□□□□ -1.11
PABPC1-220ENST00000522658 TRPM4Q8TD43 1214 aa8.09□□□□□ -1.11
PABPC1-220ENST00000522658 SPOCK3Q9BQ16 436 aa8.09□□□□□ -1.11
PABPC1-220ENST00000522658 RTFDC1Q9BY42 306 aaPredicted RBP8.09□□□□□ -1.11
PABPC1-220ENST00000522658 DBNDD1Q9H9R9 158 aa8.09□□□□□ -1.11
PABPC1-220ENST00000522658 ETNK1Q9HBU6 452 aa8.09□□□□□ -1.11
PABPC1-220ENST00000522658 NDFIP2Q9NV92 336 aa8.09□□□□□ -1.11
PABPC1-220ENST00000522658 SAGE1Q9NXZ1 904 aa8.09□□□□□ -1.11
PABPC1-220ENST00000522658 LAS1LQ9Y4W2 734 aaKnown RBP8.09□□□□□ -1.11
PABPC1-220ENST00000522658 DDX60Q8IY21 1712 aaKnown RBP8.09□□□□□ -1.11
PABPC1-220ENST00000522658 ANKRD36CQ5JPF3 1778 aa8.08□□□□□ -1.12
PABPC1-220ENST00000522658 DLG5Q8TDM6 1919 aa8.08□□□□□ -1.12
PABPC1-220ENST00000522658 MSTNO14793 375 aa8.08□□□□□ -1.12
PABPC1-220ENST00000522658 ECE2O60344 883 aa8.08□□□□□ -1.12
PABPC1-220ENST00000522658 PROCP04070 461 aa8.08□□□□□ -1.12
PABPC1-220ENST00000522658 ANXA1P04083 346 aa8.08□□□□□ -1.12
PABPC1-220ENST00000522658 MSX1P28360 303 aa8.08□□□□□ -1.12
PABPC1-220ENST00000522658 KIF4BQ2VIQ3 1234 aa8.08□□□□□ -1.12
PABPC1-220ENST00000522658 TBC1D10BQ4KMP7 808 aaPredicted RBP8.08□□□□□ -1.12
PABPC1-220ENST00000522658 XAGE3Q8WTP9 111 aa8.08□□□□□ -1.12
PABPC1-220ENST00000522658 DPF2Q92785 391 aa8.08□□□□□ -1.12
PABPC1-220ENST00000522658 HDAC9Q9UKV0 1011 aa8.08□□□□□ -1.12
PABPC1-220ENST00000522658 PHF24Q9UPV7 400 aa8.08□□□□□ -1.12
PABPC1-220ENST00000522658 PSMD14O00487 310 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 RGS19P49795 217 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 SOX10P56693 466 aa8.07□□□□□ -1.12
PABPC1-220ENST00000522658 RIPK4P57078 832 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms