RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 PROCA1Q8NCQ7 364 aaPredicted RBP23.04■■□□□ 1.28
SNHG6-204ENST00000521127 PAWRQ96IZ0 340 aaKnown RBP23.04■■□□□ 1.28
SNHG6-204ENST00000521127 HMG20BQ9P0W2 317 aa23.04■■□□□ 1.28
SNHG6-204ENST00000521127 SOX1O00570 391 aaPredicted RBP23.03■■□□□ 1.28
SNHG6-204ENST00000521127 CAPN2P17655 700 aa23.03■■□□□ 1.28
SNHG6-204ENST00000521127 TBC1D9Q6ZT07 1266 aa23.03■■□□□ 1.28
SNHG6-204ENST00000521127 DIS3LQ8TF46 1054 aaKnown RBP23.03■■□□□ 1.28
SNHG6-204ENST00000521127 NSUN4Q96CB9 384 aaKnown RBP23.03■■□□□ 1.28
SNHG6-204ENST00000521127 OSBPL5Q9H0X9 879 aaPredicted RBP23.03■■□□□ 1.28
SNHG6-204ENST00000521127 AKAP2Q9Y2D5 859 aa23.03■■□□□ 1.28
SNHG6-204ENST00000521127 LOC285556D6RIA3 1793 aa23.02■■□□□ 1.28
SNHG6-204ENST00000521127 SRGAP3O43295 1099 aa23.02■■□□□ 1.28
SNHG6-204ENST00000521127 ZNF280CQ8ND82 737 aa23.02■■□□□ 1.28
SNHG6-204ENST00000521127 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.02■■□□□ 1.28
SNHG6-204ENST00000521127 STAP2Q9UGK3 403 aa23.02■■□□□ 1.28
SNHG6-204ENST00000521127 GJD2Q9UKL4 321 aa23.02■■□□□ 1.28
SNHG6-204ENST00000521127 PNMA3Q9UL41 463 aa23.02■■□□□ 1.28
SNHG6-204ENST00000521127 CAP2P40123 477 aa23.01■■□□□ 1.27
SNHG6-204ENST00000521127 HMGCS2P54868 508 aa23.01■■□□□ 1.27
SNHG6-204ENST00000521127 NEUROD6Q96NK8 337 aa23.01■■□□□ 1.27
SNHG6-204ENST00000521127 ATAD5Q96QE3 1844 aa23.01■■□□□ 1.27
SNHG6-204ENST00000521127 COL2A1P02458 1487 aaPredicted RBP23■■□□□ 1.27
SNHG6-204ENST00000521127 A0A1W2PPC1 479 aa23■■□□□ 1.27
SNHG6-204ENST00000521127 LDHCP07864 332 aa23■■□□□ 1.27
SNHG6-204ENST00000521127 CT47B1P0C2W7 299 aaPredicted RBP23■■□□□ 1.27
SNHG6-204ENST00000521127 GCLCP48506 637 aaPredicted RBP23■■□□□ 1.27
SNHG6-204ENST00000521127 TRIM32Q13049 653 aa23■■□□□ 1.27
SNHG6-204ENST00000521127 MTX1Q13505 466 aa23■■□□□ 1.27
SNHG6-204ENST00000521127 SPATA5Q8NB90 893 aa23■■□□□ 1.27
SNHG6-204ENST00000521127 ASCC2Q9H1I8 757 aaPredicted RBP23■■□□□ 1.27
SNHG6-204ENST00000521127 MAP4K4O95819 1239 aaPredicted RBP22.99■■□□□ 1.27
SNHG6-204ENST00000521127 GSTO1P78417 241 aa22.99■■□□□ 1.27
SNHG6-204ENST00000521127 SH3D19Q5HYK7 790 aa22.99■■□□□ 1.27
SNHG6-204ENST00000521127 NECAB2Q7Z6G3 386 aa22.99■■□□□ 1.27
SNHG6-204ENST00000521127 LRCH3Q96II8 777 aa22.99■■□□□ 1.27
SNHG6-204ENST00000521127 USP17L5A8MUK1 530 aa22.98■■□□□ 1.27
SNHG6-204ENST00000521127 HMGCRP04035 888 aa22.98■■□□□ 1.27
SNHG6-204ENST00000521127 RAI14Q9P0K7 980 aa22.98■■□□□ 1.27
SNHG6-204ENST00000521127 LAMA3Q16787 3333 aa22.97■■□□□ 1.27
SNHG6-204ENST00000521127 PLXNB2O15031 1838 aa22.97■■□□□ 1.27
SNHG6-204ENST00000521127 GNAI3P08754 354 aa22.97■■□□□ 1.27
SNHG6-204ENST00000521127 ARID4AP29374 1257 aaPredicted RBP22.97■■□□□ 1.27
SNHG6-204ENST00000521127 MNX1P50219 401 aaPredicted RBP22.97■■□□□ 1.27
SNHG6-204ENST00000521127 RARSP54136 660 aaKnown RBP22.97■■□□□ 1.27
SNHG6-204ENST00000521127 TEX11Q8IYF3 940 aa22.97■■□□□ 1.27
SNHG6-204ENST00000521127 TBC1D2Q9BYX2 928 aa22.97■■□□□ 1.27
SNHG6-204ENST00000521127 MCAMP43121 646 aa22.96■■□□□ 1.27
SNHG6-204ENST00000521127 JAG1P78504 1218 aa22.96■■□□□ 1.27
SNHG6-204ENST00000521127 PABPC4Q13310 644 aaKnown RBP eCLIP22.96■■□□□ 1.277e-10■■□□□ 12.4
SNHG6-204ENST00000521127 GORABQ5T7V8 394 aa22.96■■□□□ 1.27
SNHG6-204ENST00000521127 ANKLE1Q8NAG6 615 aa22.96■■□□□ 1.27
SNHG6-204ENST00000521127 SH3RF3Q8TEJ3 882 aaPredicted RBP22.96■■□□□ 1.27
SNHG6-204ENST00000521127 GDF15Q99988 308 aa22.96■■□□□ 1.27
SNHG6-204ENST00000521127 MORF4L1Q9UBU8 362 aa22.96■■□□□ 1.27
SNHG6-204ENST00000521127 SIPA1L1O43166 1804 aa22.96■■□□□ 1.27
SNHG6-204ENST00000521127 PEX10O60683 326 aa22.95■■□□□ 1.26
SNHG6-204ENST00000521127 RPTORQ8N122 1335 aa22.95■■□□□ 1.26
SNHG6-204ENST00000521127 HERC5Q9UII4 1024 aaKnown RBP22.95■■□□□ 1.26
SNHG6-204ENST00000521127 C7orf61Q8IZ16 206 aa22.94■■□□□ 1.26
SNHG6-204ENST00000521127 TRIB2Q92519 343 aa22.94■■□□□ 1.26
SNHG6-204ENST00000521127 ARHGAP45Q92619 1136 aa22.94■■□□□ 1.26
SNHG6-204ENST00000521127 WDR18Q9BV38 432 aa22.94■■□□□ 1.26
SNHG6-204ENST00000521127 HMX1Q9NP08 348 aaPredicted RBP22.94■■□□□ 1.26
SNHG6-204ENST00000521127 ZMYND8Q9ULU4 1186 aaPredicted RBP22.94■■□□□ 1.26
SNHG6-204ENST00000521127 SHROOM1Q2M3G4 852 aaPredicted RBP22.93■■□□□ 1.26
SNHG6-204ENST00000521127 SLC17A8Q8NDX2 589 aa22.93■■□□□ 1.26
SNHG6-204ENST00000521127 P2RX7Q99572 595 aaKnown RBP22.93■■□□□ 1.26
SNHG6-204ENST00000521127 AS3MTQ9HBK9 375 aa22.93■■□□□ 1.26
SNHG6-204ENST00000521127 LRP2BPQ9P2M1 347 aa22.93■■□□□ 1.26
SNHG6-204ENST00000521127 PI4KBQ9UBF8 816 aa22.93■■□□□ 1.26
SNHG6-204ENST00000521127 TNNQ9UQP3 1299 aa22.93■■□□□ 1.26
SNHG6-204ENST00000521127 CUL9Q8IWT3 2517 aa22.92■■□□□ 1.26
SNHG6-204ENST00000521127 PNMA6EA0A0J9YXQ4 647 aa22.92■■□□□ 1.26
SNHG6-204ENST00000521127 BMP8BP34820 402 aa22.92■■□□□ 1.26
SNHG6-204ENST00000521127 BACE1P56817 501 aa22.92■■□□□ 1.26
SNHG6-204ENST00000521127 MTMR2Q13614 643 aa22.92■■□□□ 1.26
SNHG6-204ENST00000521127 NBPF3Q9H094 633 aa22.92■■□□□ 1.26
SNHG6-204ENST00000521127 DNAJC18Q9H819 358 aa22.92■■□□□ 1.26
SNHG6-204ENST00000521127 TXNRD2Q9NNW7 524 aa22.92■■□□□ 1.26
SNHG6-204ENST00000521127 COL6A3P12111 3177 aa22.92■■□□□ 1.26
SNHG6-204ENST00000521127 CYP2B6P20813 491 aa22.91■■□□□ 1.26
SNHG6-204ENST00000521127 HOXA7P31268 230 aaPredicted RBP22.91■■□□□ 1.26
SNHG6-204ENST00000521127 IRX3P78415 501 aaPredicted RBP22.91■■□□□ 1.26
SNHG6-204ENST00000521127 MAP3K21Q5TCX8 1036 aa22.91■■□□□ 1.26
SNHG6-204ENST00000521127 SNRKQ9NRH2 765 aa22.91■■□□□ 1.26
SNHG6-204ENST00000521127 AATFQ9NY61 560 aaKnown RBP eCLIP22.91■■□□□ 1.26
SNHG6-204ENST00000521127 OGDHLQ9ULD0 1010 aa22.91■■□□□ 1.26
SNHG6-204ENST00000521127 DDX60LQ5H9U9 1706 aaKnown RBP22.91■■□□□ 1.26
SNHG6-204ENST00000521127 UQCRFS1P1P0C7P4 283 aa22.9■■□□□ 1.26
SNHG6-204ENST00000521127 G3BP1Q13283 466 aaKnown RBP eCLIP22.9■■□□□ 1.26
SNHG6-204ENST00000521127 DHX36Q9H2U1 1008 aaKnown RBP22.9■■□□□ 1.26
SNHG6-204ENST00000521127 C11orf49Q9H6J7 331 aa22.9■■□□□ 1.26
SNHG6-204ENST00000521127 GNAI2P04899 355 aa22.89■■□□□ 1.25
SNHG6-204ENST00000521127 ASNSP08243 561 aa22.89■■□□□ 1.25
SNHG6-204ENST00000521127 SYN1P17600 705 aa22.89■■□□□ 1.25
SNHG6-204ENST00000521127 PPP4CP60510 307 aa22.89■■□□□ 1.25
SNHG6-204ENST00000521127 HERVK_113P62684 666 aa22.89■■□□□ 1.25
SNHG6-204ENST00000521127 NAA16Q6N069 864 aaPredicted RBP22.89■■□□□ 1.25
SNHG6-204ENST00000521127 ADGRA1Q86SQ6 560 aa22.89■■□□□ 1.25
SNHG6-204ENST00000521127 METTL16Q86W50 562 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms