RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 SAFBQ15424 915 aaKnown RBP eCLIP17.73■□□□□ 0.43
SDHA-218ENST00000515752 KRT40Q6A162 431 aa17.73■□□□□ 0.43
SDHA-218ENST00000515752 ADALQ6DHV7 355 aa17.73■□□□□ 0.43
SDHA-218ENST00000515752 CATIPQ7Z7H3 387 aa17.73■□□□□ 0.43
SDHA-218ENST00000515752 SP8Q8IXZ3 490 aa17.73■□□□□ 0.43
SDHA-218ENST00000515752 CD209Q9NNX6 404 aa17.73■□□□□ 0.43
SDHA-218ENST00000515752 RBM28Q9NW13 759 aaKnown RBP17.73■□□□□ 0.43
SDHA-218ENST00000515752 RANBP6O60518 1105 aaKnown RBP17.72■□□□□ 0.43
SDHA-218ENST00000515752 DEXIO95424 95 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 STK38Q15208 465 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 SF3A1Q15459 793 aaKnown RBP17.72■□□□□ 0.43
SDHA-218ENST00000515752 IFIT1BQ5T764 474 aaKnown RBP17.72■□□□□ 0.43
SDHA-218ENST00000515752 LINC00301Q8NCQ3 95 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 PHKBQ93100 1093 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 ZKSCAN3Q9BRR0 538 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 SLC26A6Q9BXS9 759 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.72■□□□□ 0.43
SDHA-218ENST00000515752 PLCG2P16885 1265 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 U2AF2P26368 475 aaKnown RBP eCLIP17.72■□□□□ 0.43
SDHA-218ENST00000515752 CCDC178Q5BJE1 867 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 OTUD7BQ6GQQ9 843 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 CCAR1Q8IX12 1150 aaKnown RBP17.72■□□□□ 0.43
SDHA-218ENST00000515752 CCDC144CPQ8IYA2 1237 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 CRACR2BQ8N4Y2 399 aaPredicted RBP17.72■□□□□ 0.43
SDHA-218ENST00000515752 JMYQ8N9B5 988 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 MYL10Q9BUA6 226 aa17.72■□□□□ 0.43
SDHA-218ENST00000515752 CCDC88AQ3V6T2 1871 aa17.71■□□□□ 0.43
SDHA-218ENST00000515752 NR1I2O75469 434 aa17.71■□□□□ 0.43
SDHA-218ENST00000515752 DDAH1O94760 285 aa17.71■□□□□ 0.43
SDHA-218ENST00000515752 APBA3O96018 575 aa17.71■□□□□ 0.43
SDHA-218ENST00000515752 POLR3DP05423 398 aaPredicted RBP17.71■□□□□ 0.43
SDHA-218ENST00000515752 XBP1P17861 261 aa17.71■□□□□ 0.43
SDHA-218ENST00000515752 ALDH1B1P30837 517 aa17.71■□□□□ 0.43
SDHA-218ENST00000515752 FAM160A1Q05DH4 1040 aa17.71■□□□□ 0.43
SDHA-218ENST00000515752 RNF26Q9BY78 433 aaPredicted RBP17.71■□□□□ 0.43
SDHA-218ENST00000515752 KIAA1551Q9HCM1 1747 aa17.71■□□□□ 0.43
SDHA-218ENST00000515752 SPTLC2O15270 562 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 USP5P45974 858 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 AKAP17AQ02040 695 aaKnown RBP17.7■□□□□ 0.42
SDHA-218ENST00000515752 ANO1Q5XXA6 986 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 ENAHQ8N8S7 591 aaPredicted RBP17.7■□□□□ 0.42
SDHA-218ENST00000515752 TBC1D16Q8TBP0 767 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 ZNF287Q9HBT7 754 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 KINO60870 393 aaKnown RBP17.7■□□□□ 0.42
SDHA-218ENST00000515752 NPR1P16066 1061 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 PDE6BP35913 854 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 SASS6Q6UVJ0 657 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 STK11IPQ8N1F8 1099 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 NUP133Q8WUM0 1156 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 MRPS27Q92552 414 aaKnown RBP17.7■□□□□ 0.42
SDHA-218ENST00000515752 FAM163AQ96GL9 167 aaPredicted RBP17.7■□□□□ 0.42
SDHA-218ENST00000515752 TMX4Q9H1E5 349 aaPredicted RBP17.7■□□□□ 0.42
SDHA-218ENST00000515752 MCM9Q9NXL9 1143 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 SUGT1Q9Y2Z0 365 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 ATP6V0A2Q9Y487 856 aa17.7■□□□□ 0.42
SDHA-218ENST00000515752 MYH15Q9Y2K3 1946 aa17.69■□□□□ 0.42
SDHA-218ENST00000515752 MROH7-TTC4A0A0A0MT08 1334 aa17.69■□□□□ 0.42
SDHA-218ENST00000515752 PPEF1O14829 653 aaPredicted RBP17.69■□□□□ 0.42
SDHA-218ENST00000515752 CAMK4Q16566 473 aa17.69■□□□□ 0.42
SDHA-218ENST00000515752 NBPF11Q86T75 865 aa17.69■□□□□ 0.42
SDHA-218ENST00000515752 MKRN1Q9UHC7 482 aaKnown RBP17.69■□□□□ 0.42
SDHA-218ENST00000515752 PCDHA7Q9UN72 937 aa17.69■□□□□ 0.42
SDHA-218ENST00000515752 ESPNB1AK53 854 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 TYRO3Q06418 890 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 SLC39A14Q15043 492 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 C12orf60Q5U649 245 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 FAM200AQ8TCP9 573 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 FTOQ9C0B1 505 aaKnown RBP eCLIP17.68■□□□□ 0.42
SDHA-218ENST00000515752 FOXP1Q9H334 677 aaPredicted RBP17.68■□□□□ 0.42
SDHA-218ENST00000515752 CYP2D7A0A087X1C5 515 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 KIF28PB7ZC32 967 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 C6orf229H3BNL8 230 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 PPP6R2O75170 966 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 MMP1P03956 469 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 RXRBP28702 533 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 COL23A1Q86Y22 540 aaPredicted RBP17.68■□□□□ 0.42
SDHA-218ENST00000515752 FSIP1Q8NA03 581 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 ENGASEQ8NFI3 743 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 COA1Q9GZY4 146 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 CLIC4Q9Y696 253 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 PARP3Q9Y6F1 533 aa17.68■□□□□ 0.42
SDHA-218ENST00000515752 FAM205AQ6ZU69 1335 aa17.67■□□□□ 0.42
SDHA-218ENST00000515752 ROBO3Q96MS0 1386 aa17.67■□□□□ 0.42
SDHA-218ENST00000515752 GPR75-ASB3A0A0A6YYF3 556 aa17.67■□□□□ 0.42
SDHA-218ENST00000515752 SRGNP10124 158 aa17.67■□□□□ 0.42
SDHA-218ENST00000515752 TROAPQ12815 778 aa17.67■□□□□ 0.42
SDHA-218ENST00000515752 ZNF827Q17R98 1081 aa17.67■□□□□ 0.42
SDHA-218ENST00000515752 AIFM3Q96NN9 605 aa17.67■□□□□ 0.42
SDHA-218ENST00000515752 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.67■□□□□ 0.42
SDHA-218ENST00000515752 GJB4Q9NTQ9 266 aa17.67■□□□□ 0.42
SDHA-218ENST00000515752 POLLQ9UGP5 575 aa17.67■□□□□ 0.42
SDHA-218ENST00000515752 JAG2Q9Y219 1238 aa17.67■□□□□ 0.42
SDHA-218ENST00000515752 TSPY2A6NKD2 308 aa17.66■□□□□ 0.42
SDHA-218ENST00000515752 PRPF3O43395 683 aaKnown RBP17.66■□□□□ 0.42
SDHA-218ENST00000515752 PRDM1O75626 825 aa17.66■□□□□ 0.42
SDHA-218ENST00000515752 SNW1Q13573 536 aaKnown RBP17.66■□□□□ 0.42
SDHA-218ENST00000515752 DGKHQ86XP1 1220 aa17.66■□□□□ 0.42
SDHA-218ENST00000515752 NOSTRINQ8IVI9 506 aa17.66■□□□□ 0.42
SDHA-218ENST00000515752 CTCFLQ8NI51 663 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms