RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 TTC22Q5TAA0 569 aa8.54□□□□□ -1.04
SMAD1-213ENST00000514778 GIMAP6Q6P9H5 292 aa8.54□□□□□ -1.04
SMAD1-213ENST00000514778 USP48Q86UV5 1035 aa8.54□□□□□ -1.04
SMAD1-213ENST00000514778 EDC3Q96F86 508 aaKnown RBP8.54□□□□□ -1.04
SMAD1-213ENST00000514778 FSD1Q9BTV5 496 aa8.54□□□□□ -1.04
SMAD1-213ENST00000514778 DHX36Q9H2U1 1008 aaKnown RBP8.54□□□□□ -1.04
SMAD1-213ENST00000514778 HELLSQ9NRZ9 838 aa8.54□□□□□ -1.04
SMAD1-213ENST00000514778 NDUFB9Q9Y6M9 179 aa8.54□□□□□ -1.04
SMAD1-213ENST00000514778 ATRNL1Q5VV63 1379 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 ECM29Q5VYK3 1845 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 CLRN2A0PK11 232 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 TRIM6-TRIM34B2RNG4 842 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 APLP1P51693 650 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 MFAP1P55081 439 aaKnown RBP8.53□□□□□ -1.04
SMAD1-213ENST00000514778 RASA3Q14644 834 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 BMP2KLQ5H9B9 411 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 ADGRA1Q86SQ6 560 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 TEX11Q8IYF3 940 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 CDCA5Q96FF9 252 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 DDX27Q96GQ7 796 aaKnown RBP8.53□□□□□ -1.04
SMAD1-213ENST00000514778 HHIPL1Q96JK4 782 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 TEPSINQ96N21 525 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 CRNKL1Q9BZJ0 848 aaKnown RBP8.53□□□□□ -1.04
SMAD1-213ENST00000514778 VEZTQ9HBM0 779 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 ATP8A2Q9NTI2 1148 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 AATFQ9NY61 560 aaKnown RBP eCLIP8.53□□□□□ -1.04
SMAD1-213ENST00000514778 PCDHAC2Q9Y5I4 1007 aa8.53□□□□□ -1.04
SMAD1-213ENST00000514778 ASTN2O75129 1339 aaPredicted RBP8.53□□□□□ -1.04
SMAD1-213ENST00000514778 CNTNAP1P78357 1384 aa8.52□□□□□ -1.05
SMAD1-213ENST00000514778 TMEM88BA6NKF7 163 aa8.52□□□□□ -1.05
SMAD1-213ENST00000514778 SDSP20132 328 aa8.52□□□□□ -1.05
SMAD1-213ENST00000514778 MAP3K10Q02779 954 aa8.52□□□□□ -1.05
SMAD1-213ENST00000514778 MFSD10Q14728 455 aa8.52□□□□□ -1.05
SMAD1-213ENST00000514778 MAP3K11Q16584 847 aa8.52□□□□□ -1.05
SMAD1-213ENST00000514778 ZMYM1Q5SVZ6 1142 aa8.52□□□□□ -1.05
SMAD1-213ENST00000514778 DCAF15Q66K64 600 aa8.52□□□□□ -1.05
SMAD1-213ENST00000514778 SH3RF3Q8TEJ3 882 aaPredicted RBP8.52□□□□□ -1.05
SMAD1-213ENST00000514778 RILPL2Q969X0 211 aa8.52□□□□□ -1.05
SMAD1-213ENST00000514778 AIDAQ96BJ3 306 aa8.52□□□□□ -1.05
SMAD1-213ENST00000514778 DDRGK1Q96HY6 314 aa8.52□□□□□ -1.05
SMAD1-213ENST00000514778 STRBPQ96SI9 672 aaKnown RBP8.52□□□□□ -1.05
SMAD1-213ENST00000514778 LARP6Q9BRS8 491 aaKnown RBP8.52□□□□□ -1.05
SMAD1-213ENST00000514778 GLIS2Q9BZE0 524 aaPredicted RBP8.52□□□□□ -1.05
SMAD1-213ENST00000514778 FAM198AQ9UFP1 575 aa8.52□□□□□ -1.05
SMAD1-213ENST00000514778 TCP10L2B9ZVM9 353 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 ADM5C9JUS6 153 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 TK2O00142 265 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 PPP1R12BO60237 982 aaPredicted RBP8.51□□□□□ -1.05
SMAD1-213ENST00000514778 GSPT1P15170 499 aaKnown RBP8.51□□□□□ -1.05
SMAD1-213ENST00000514778 HSPA6P17066 643 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 RGS3P49796 1198 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 NFIAQ12857 509 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 MCMDC2Q4G0Z9 681 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 CST9Q5W186 159 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 ADGRD1Q6QNK2 874 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 TTC6Q86TZ1 520 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 METTL16Q86W50 562 aaKnown RBP8.51□□□□□ -1.05
SMAD1-213ENST00000514778 FOXP4Q8IVH2 680 aaPredicted RBP8.51□□□□□ -1.05
SMAD1-213ENST00000514778 C2orf69Q8N8R5 385 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 RUFY2Q8WXA3 655 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 PUS7LQ9H0K6 701 aaKnown RBP8.51□□□□□ -1.05
SMAD1-213ENST00000514778 OSBPL5Q9H0X9 879 aaPredicted RBP8.51□□□□□ -1.05
SMAD1-213ENST00000514778 PI4KBQ9UBF8 816 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 MKRN1Q9UHC7 482 aaKnown RBP8.51□□□□□ -1.05
SMAD1-213ENST00000514778 HERC5Q9UII4 1024 aaKnown RBP8.51□□□□□ -1.05
SMAD1-213ENST00000514778 FLT1P17948 1338 aa8.51□□□□□ -1.05
SMAD1-213ENST00000514778 MYH2Q9UKX2 1941 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 PATL2C9JE40 543 aaKnown RBP8.5□□□□□ -1.05
SMAD1-213ENST00000514778 TRAF5O00463 557 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 MBD4O95243 580 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 CELF2O95319 508 aaKnown RBP8.5□□□□□ -1.05
SMAD1-213ENST00000514778 USP5P45974 858 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 CACNB3P54284 484 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 DYNLL1P63167 89 aaKnown RBP8.5□□□□□ -1.05
SMAD1-213ENST00000514778 ARMC9Q7Z3E5 817 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 AMOTL1Q8IY63 956 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 LCORLQ8N3X6 602 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 MIGA1Q8NAN2 632 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 TGFBRAP1Q8WUH2 860 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 OSBP2Q969R2 916 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 NACAP1Q9BZK3 213 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 TMEM39BQ9GZU3 492 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 EHD4Q9H223 541 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 DIAPH3Q9NSV4 1193 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 GINM1Q9NU53 330 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 ZMYM6O95789 1325 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 RAD50Q92878 1312 aa8.5□□□□□ -1.05
SMAD1-213ENST00000514778 GPAA1O43292 621 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 EIF5BO60841 1220 aaKnown RBP8.49□□□□□ -1.05
SMAD1-213ENST00000514778 HLA-DOAP06340 250 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 IREB2P48200 963 aaKnown RBP8.49□□□□□ -1.05
SMAD1-213ENST00000514778 NT5C2P49902 561 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 PICALMQ13492 652 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 ALX1Q15699 326 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 SBK1Q52WX2 424 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 LDLRAD1Q5T700 205 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 NBPF12Q5TAG4 269 aaPredicted RBP8.49□□□□□ -1.05
SMAD1-213ENST00000514778 CASC1Q6TDU7 716 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 SAPCD2Q86UD0 394 aa8.49□□□□□ -1.05
SMAD1-213ENST00000514778 ZSCAN29Q8IWY8 852 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms