RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 TEX11Q8IYF3 940 aa18.25■□□□□ 0.51
SMAD5-206ENST00000509962 ANKRD13CQ8N6S4 541 aa18.25■□□□□ 0.51
SMAD5-206ENST00000509962 PROCA1Q8NCQ7 364 aaPredicted RBP18.25■□□□□ 0.51
SMAD5-206ENST00000509962 ZNF280CQ8ND82 737 aa18.25■□□□□ 0.51
SMAD5-206ENST00000509962 PXYLP1Q8TE99 480 aa18.25■□□□□ 0.51
SMAD5-206ENST00000509962 U2AF1L4Q8WU68 220 aaKnown RBP18.25■□□□□ 0.51
SMAD5-206ENST00000509962 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
SMAD5-206ENST00000509962 TNNQ9UQP3 1299 aa18.25■□□□□ 0.51
SMAD5-206ENST00000509962 SGPL1O95470 568 aa18.24■□□□□ 0.51
SMAD5-206ENST00000509962 BAG3O95817 575 aa18.24■□□□□ 0.51
SMAD5-206ENST00000509962 ELNP15502 786 aa18.24■□□□□ 0.51
SMAD5-206ENST00000509962 CAP2P40123 477 aa18.24■□□□□ 0.51
SMAD5-206ENST00000509962 MCAMP43121 646 aa18.24■□□□□ 0.51
SMAD5-206ENST00000509962 PABPC4Q13310 644 aaKnown RBP eCLIP18.24■□□□□ 0.51
SMAD5-206ENST00000509962 IRF5Q13568 498 aa18.24■□□□□ 0.51
SMAD5-206ENST00000509962 CCDC158Q5M9N0 1113 aa18.24■□□□□ 0.51
SMAD5-206ENST00000509962 TREML2Q5T2D2 321 aa18.24■□□□□ 0.51
SMAD5-206ENST00000509962 UNC93B1Q9H1C4 597 aa18.24■□□□□ 0.51
SMAD5-206ENST00000509962 TAOK2Q9UL54 1235 aa18.24■□□□□ 0.51
SMAD5-206ENST00000509962 PHIPQ8WWQ0 1821 aa18.23■□□□□ 0.51
SMAD5-206ENST00000509962 USP17L5A8MUK1 530 aa18.23■□□□□ 0.51
SMAD5-206ENST00000509962 TFRCP02786 760 aaKnown RBP18.23■□□□□ 0.51
SMAD5-206ENST00000509962 CAPN2P17655 700 aa18.23■□□□□ 0.51
SMAD5-206ENST00000509962 OS9Q13438 667 aaPredicted RBP18.23■□□□□ 0.51
SMAD5-206ENST00000509962 TTC39AQ5SRH9 613 aa18.23■□□□□ 0.51
SMAD5-206ENST00000509962 DHX36Q9H2U1 1008 aaKnown RBP18.23■□□□□ 0.51
SMAD5-206ENST00000509962 AS3MTQ9HBK9 375 aa18.23■□□□□ 0.51
SMAD5-206ENST00000509962 PI4KBQ9UBF8 816 aa18.23■□□□□ 0.51
SMAD5-206ENST00000509962 HERC5Q9UII4 1024 aaKnown RBP18.23■□□□□ 0.51
SMAD5-206ENST00000509962 PTPRFP10586 1907 aa18.22■□□□□ 0.51
SMAD5-206ENST00000509962 PLCG2P16885 1265 aa18.22■□□□□ 0.51
SMAD5-206ENST00000509962 GCLCP48506 637 aaPredicted RBP18.22■□□□□ 0.51
SMAD5-206ENST00000509962 HMGCS2P54868 508 aa18.22■□□□□ 0.51
SMAD5-206ENST00000509962 ZKSCAN2Q63HK3 967 aa18.22■□□□□ 0.51
SMAD5-206ENST00000509962 NAA16Q6N069 864 aaPredicted RBP18.22■□□□□ 0.51
SMAD5-206ENST00000509962 SH3RF3Q8TEJ3 882 aaPredicted RBP18.22■□□□□ 0.51
SMAD5-206ENST00000509962 GPR108Q9NPR9 543 aa18.22■□□□□ 0.51
SMAD5-206ENST00000509962 SNRKQ9NRH2 765 aa18.22■□□□□ 0.51
SMAD5-206ENST00000509962 NR2E3Q9Y5X4 410 aa18.22■□□□□ 0.51
SMAD5-206ENST00000509962 BRCA2P51587 3418 aa18.21■□□□□ 0.51
SMAD5-206ENST00000509962 FARP2O94887 1054 aaPredicted RBP18.21■□□□□ 0.51
SMAD5-206ENST00000509962 INHAP05111 366 aa18.21■□□□□ 0.51
SMAD5-206ENST00000509962 FAM110CQ1W6H9 321 aa18.21■□□□□ 0.51
SMAD5-206ENST00000509962 CHRDL2Q6WN34 429 aa18.21■□□□□ 0.51
SMAD5-206ENST00000509962 UBE2Q1Q7Z7E8 422 aa18.21■□□□□ 0.51
SMAD5-206ENST00000509962 TMEM57Q8N5G2 664 aa18.21■□□□□ 0.51
SMAD5-206ENST00000509962 AATFQ9NY61 560 aaKnown RBP eCLIP18.21■□□□□ 0.51
SMAD5-206ENST00000509962 COL2A1P02458 1487 aaPredicted RBP18.2■□□□□ 0.5
SMAD5-206ENST00000509962 ATP8B2P98198 1209 aa18.2■□□□□ 0.5
SMAD5-206ENST00000509962 RRP1BQ14684 758 aaKnown RBP18.2■□□□□ 0.5
SMAD5-206ENST00000509962 TNNI3KQ59H18 835 aa18.2■□□□□ 0.5
SMAD5-206ENST00000509962 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
SMAD5-206ENST00000509962 DEFB118Q96PH6 123 aa18.2■□□□□ 0.5
SMAD5-206ENST00000509962 TRIM34Q9BYJ4 488 aa18.2■□□□□ 0.5
SMAD5-206ENST00000509962 FPGT-TNNI3KV9GXZ4 949 aa18.2■□□□□ 0.5
SMAD5-206ENST00000509962 CEP290O15078 2479 aa18.2■□□□□ 0.5
SMAD5-206ENST00000509962 SURF6O75683 361 aaKnown RBP18.19■□□□□ 0.5
SMAD5-206ENST00000509962 PPP4CP60510 307 aa18.19■□□□□ 0.5
SMAD5-206ENST00000509962 POLA2Q14181 598 aa18.19■□□□□ 0.5
SMAD5-206ENST00000509962 SH3D19Q5HYK7 790 aa18.19■□□□□ 0.5
SMAD5-206ENST00000509962 CRACR2BQ8N4Y2 399 aaPredicted RBP18.19■□□□□ 0.5
SMAD5-206ENST00000509962 TGFBRAP1Q8WUH2 860 aa18.19■□□□□ 0.5
SMAD5-206ENST00000509962 DBNDD2Q9BQY9 259 aa18.19■□□□□ 0.5
SMAD5-206ENST00000509962 ASCC2Q9H1I8 757 aaPredicted RBP18.19■□□□□ 0.5
SMAD5-206ENST00000509962 CYP2E1P05181 493 aaPredicted RBP18.18■□□□□ 0.5
SMAD5-206ENST00000509962 ASNSP08243 561 aa18.18■□□□□ 0.5
SMAD5-206ENST00000509962 MAPKAPK5Q8IW41 473 aa18.18■□□□□ 0.5
SMAD5-206ENST00000509962 SSH3Q8TE77 659 aa18.18■□□□□ 0.5
SMAD5-206ENST00000509962 WDR18Q9BV38 432 aa18.18■□□□□ 0.5
SMAD5-206ENST00000509962 TMOD4Q9NZQ9 345 aa18.18■□□□□ 0.5
SMAD5-206ENST00000509962 DOCK3Q8IZD9 2030 aa18.17■□□□□ 0.5
SMAD5-206ENST00000509962 IGSF3O75054 1194 aa18.17■□□□□ 0.5
SMAD5-206ENST00000509962 BACE1P56817 501 aa18.17■□□□□ 0.5
SMAD5-206ENST00000509962 RBM27Q9P2N5 1060 aaKnown RBP18.17■□□□□ 0.5
SMAD5-206ENST00000509962 ATAD5Q96QE3 1844 aa18.16■□□□□ 0.5
SMAD5-206ENST00000509962 C19orf81C9J6K1 198 aa18.16■□□□□ 0.5
SMAD5-206ENST00000509962 EVI5O60447 810 aa18.16■□□□□ 0.5
SMAD5-206ENST00000509962 IRX3P78415 501 aaPredicted RBP18.16■□□□□ 0.5
SMAD5-206ENST00000509962 MTMR2Q13614 643 aa18.16■□□□□ 0.5
SMAD5-206ENST00000509962 ZNF512BQ96KM6 892 aaPredicted RBP18.16■□□□□ 0.5
SMAD5-206ENST00000509962 PAK6Q9NQU5 681 aaPredicted RBP18.16■□□□□ 0.5
SMAD5-206ENST00000509962 GINM1Q9NU53 330 aa18.16■□□□□ 0.5
SMAD5-206ENST00000509962 PALD1Q9ULE6 856 aa18.16■□□□□ 0.5
SMAD5-206ENST00000509962 USP17L10C9JJH3 530 aa18.15■□□□□ 0.5
SMAD5-206ENST00000509962 HLA-DOAP06340 250 aa18.15■□□□□ 0.5
SMAD5-206ENST00000509962 ZAP70P43403 619 aa18.15■□□□□ 0.5
SMAD5-206ENST00000509962 ADGRA1Q86SQ6 560 aa18.15■□□□□ 0.5
SMAD5-206ENST00000509962 FTSJ3Q8IY81 847 aaKnown RBP18.15■□□□□ 0.5
SMAD5-206ENST00000509962 P2RX7Q99572 595 aaKnown RBP18.15■□□□□ 0.5
SMAD5-206ENST00000509962 CRISPLD2Q9H0B8 497 aa18.15■□□□□ 0.5
SMAD5-206ENST00000509962 GJD2Q9UKL4 321 aa18.15■□□□□ 0.5
SMAD5-206ENST00000509962 ZBTB7BO15156 539 aaPredicted RBP18.14■□□□□ 0.49
SMAD5-206ENST00000509962 HMGCRP04035 888 aa18.14■□□□□ 0.49
SMAD5-206ENST00000509962 HOXA7P31268 230 aaPredicted RBP18.14■□□□□ 0.49
SMAD5-206ENST00000509962 METTL16Q86W50 562 aaKnown RBP18.14■□□□□ 0.49
SMAD5-206ENST00000509962 PAWRQ96IZ0 340 aaKnown RBP18.14■□□□□ 0.49
SMAD5-206ENST00000509962 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.14■□□□□ 0.49
SMAD5-206ENST00000509962 CCDC8Q9H0W5 538 aaPredicted RBP18.14■□□□□ 0.49
SMAD5-206ENST00000509962 C1orf115Q9H7X2 142 aa18.14■□□□□ 0.49
SMAD5-206ENST00000509962 HMX1Q9NP08 348 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms