RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 MAP4K4O95819 1239 aaPredicted RBP14.93□□□□□ -0.02
NEDD9-209ENST00000504634 GCLCP48506 637 aaPredicted RBP14.93□□□□□ -0.02
NEDD9-209ENST00000504634 HMGCS2P54868 508 aa14.93□□□□□ -0.02
NEDD9-209ENST00000504634 TBC1D9Q6ZT07 1266 aa14.93□□□□□ -0.02
NEDD9-209ENST00000504634 TRMT2AQ8IZ69 625 aaKnown RBP14.93□□□□□ -0.02
NEDD9-209ENST00000504634 NSUN4Q96CB9 384 aaKnown RBP14.93□□□□□ -0.02
NEDD9-209ENST00000504634 TBC1D2Q9BYX2 928 aa14.93□□□□□ -0.02
NEDD9-209ENST00000504634 PAK6Q9NQU5 681 aaPredicted RBP14.93□□□□□ -0.02
NEDD9-209ENST00000504634 A0A0C4DFX4 3053 aa14.93□□□□□ -0.02
NEDD9-209ENST00000504634 PI16Q6UXB8 463 aa14.92□□□□□ -0.02
NEDD9-209ENST00000504634 TEX11Q8IYF3 940 aa14.92□□□□□ -0.02
NEDD9-209ENST00000504634 PAWRQ96IZ0 340 aaKnown RBP14.92□□□□□ -0.02
NEDD9-209ENST00000504634 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.92□□□□□ -0.02
NEDD9-209ENST00000504634 AS3MTQ9HBK9 375 aa14.92□□□□□ -0.02
NEDD9-209ENST00000504634 LRP2BPQ9P2M1 347 aa14.92□□□□□ -0.02
NEDD9-209ENST00000504634 MYH13Q9UKX3 1938 aa14.92□□□□□ -0.02
NEDD9-209ENST00000504634 RANBP2P49792 3224 aaKnown RBP14.91□□□□□ -0.02
NEDD9-209ENST00000504634 USP17L5A8MUK1 530 aa14.91□□□□□ -0.02
NEDD9-209ENST00000504634 CAP2P40123 477 aa14.91□□□□□ -0.02
NEDD9-209ENST00000504634 G3BP1Q13283 466 aaKnown RBP eCLIP14.91□□□□□ -0.02
NEDD9-209ENST00000504634 NECAB2Q7Z6G3 386 aa14.91□□□□□ -0.02
NEDD9-209ENST00000504634 ZNF384Q8TF68 577 aa14.91□□□□□ -0.02
NEDD9-209ENST00000504634 CRISPLD2Q9H0B8 497 aa14.91□□□□□ -0.02
NEDD9-209ENST00000504634 PRO3102Q9H379 93 aa14.91□□□□□ -0.02
NEDD9-209ENST00000504634 HERC5Q9UII4 1024 aaKnown RBP14.91□□□□□ -0.02
NEDD9-209ENST00000504634 A0A1W2PPC1 479 aa14.9□□□□□ -0.02
NEDD9-209ENST00000504634 HMGCRP04035 888 aa14.9□□□□□ -0.02
NEDD9-209ENST00000504634 UQCRFS1P1P0C7P4 283 aa14.9□□□□□ -0.02
NEDD9-209ENST00000504634 RARSP54136 660 aaKnown RBP14.9□□□□□ -0.02
NEDD9-209ENST00000504634 MTX1Q13505 466 aa14.9□□□□□ -0.02
NEDD9-209ENST00000504634 ARHGAP45Q92619 1136 aa14.9□□□□□ -0.02
NEDD9-209ENST00000504634 TRIM34Q9BYJ4 488 aa14.9□□□□□ -0.02
NEDD9-209ENST00000504634 ASCC2Q9H1I8 757 aaPredicted RBP14.9□□□□□ -0.02
NEDD9-209ENST00000504634 PI4KBQ9UBF8 816 aa14.9□□□□□ -0.02
NEDD9-209ENST00000504634 STAP2Q9UGK3 403 aa14.9□□□□□ -0.02
NEDD9-209ENST00000504634 BAG3O95817 575 aa14.89□□□□□ -0.03
NEDD9-209ENST00000504634 GNAI2P04899 355 aa14.89□□□□□ -0.03
NEDD9-209ENST00000504634 IRX3P78415 501 aaPredicted RBP14.89□□□□□ -0.03
NEDD9-209ENST00000504634 SH3RF3Q8TEJ3 882 aaPredicted RBP14.89□□□□□ -0.03
NEDD9-209ENST00000504634 HMX1Q9NP08 348 aaPredicted RBP14.89□□□□□ -0.03
NEDD9-209ENST00000504634 TMOD4Q9NZQ9 345 aa14.89□□□□□ -0.03
NEDD9-209ENST00000504634 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.89□□□□□ -0.03
NEDD9-209ENST00000504634 DOCK2Q92608 1830 aa14.89□□□□□ -0.03
NEDD9-209ENST00000504634 IPO8O15397 1037 aaKnown RBP14.88□□□□□ -0.03
NEDD9-209ENST00000504634 ARID4AP29374 1257 aaPredicted RBP14.88□□□□□ -0.03
NEDD9-209ENST00000504634 MCAMP43121 646 aa14.88□□□□□ -0.03
NEDD9-209ENST00000504634 MTMR2Q13614 643 aa14.88□□□□□ -0.03
NEDD9-209ENST00000504634 RRP1BQ14684 758 aaKnown RBP14.88□□□□□ -0.03
NEDD9-209ENST00000504634 NAA16Q6N069 864 aaPredicted RBP14.88□□□□□ -0.03
NEDD9-209ENST00000504634 CRACR2BQ8N4Y2 399 aaPredicted RBP14.88□□□□□ -0.03
NEDD9-209ENST00000504634 ANKLE1Q8NAG6 615 aa14.88□□□□□ -0.03
NEDD9-209ENST00000504634 DIS3LQ8TF46 1054 aaKnown RBP14.88□□□□□ -0.03
NEDD9-209ENST00000504634 DHX36Q9H2U1 1008 aaKnown RBP14.88□□□□□ -0.03
NEDD9-209ENST00000504634 AATFQ9NY61 560 aaKnown RBP eCLIP14.88□□□□□ -0.03
NEDD9-209ENST00000504634 RPTORQ8N122 1335 aa14.88□□□□□ -0.03
NEDD9-209ENST00000504634 COL2A1P02458 1487 aaPredicted RBP14.88□□□□□ -0.03
NEDD9-209ENST00000504634 ASNSP08243 561 aa14.87□□□□□ -0.03
NEDD9-209ENST00000504634 PLCG2P16885 1265 aa14.87□□□□□ -0.03
NEDD9-209ENST00000504634 CYP2B6P20813 491 aa14.87□□□□□ -0.03
NEDD9-209ENST00000504634 BACE1P56817 501 aa14.87□□□□□ -0.03
NEDD9-209ENST00000504634 OS9Q13438 667 aaPredicted RBP14.87□□□□□ -0.03
NEDD9-209ENST00000504634 SH3D19Q5HYK7 790 aa14.87□□□□□ -0.03
NEDD9-209ENST00000504634 TTC39AQ5SRH9 613 aa14.87□□□□□ -0.03
NEDD9-209ENST00000504634 CCAR1Q8IX12 1150 aaKnown RBP14.87□□□□□ -0.03
NEDD9-209ENST00000504634 C7orf61Q8IZ16 206 aa14.87□□□□□ -0.03
NEDD9-209ENST00000504634 NBPF3Q9H094 633 aa14.87□□□□□ -0.03
NEDD9-209ENST00000504634 SNRKQ9NRH2 765 aa14.87□□□□□ -0.03
NEDD9-209ENST00000504634 GJD2Q9UKL4 321 aa14.87□□□□□ -0.03
NEDD9-209ENST00000504634 MYH2Q9UKX2 1941 aa14.86□□□□□ -0.03
NEDD9-209ENST00000504634 DLL1O00548 723 aa14.86□□□□□ -0.03
NEDD9-209ENST00000504634 TRIM32Q13049 653 aa14.86□□□□□ -0.03
NEDD9-209ENST00000504634 CCDC158Q5M9N0 1113 aa14.86□□□□□ -0.03
NEDD9-209ENST00000504634 MAPKAPK5Q8IW41 473 aa14.86□□□□□ -0.03
NEDD9-209ENST00000504634 SLC17A8Q8NDX2 589 aa14.86□□□□□ -0.03
NEDD9-209ENST00000504634 FRAT1Q92837 279 aaPredicted RBP14.86□□□□□ -0.03
NEDD9-209ENST00000504634 WDR18Q9BV38 432 aa14.86□□□□□ -0.03
NEDD9-209ENST00000504634 MORF4L1Q9UBU8 362 aa14.86□□□□□ -0.03
NEDD9-209ENST00000504634 ZMYND8Q9ULU4 1186 aaPredicted RBP14.86□□□□□ -0.03
NEDD9-209ENST00000504634 DOCK1Q14185 1865 aa14.86□□□□□ -0.03
NEDD9-209ENST00000504634 PNMA6EA0A0J9YXQ4 647 aa14.85□□□□□ -0.03
NEDD9-209ENST00000504634 TRIM27P14373 513 aa14.85□□□□□ -0.03
NEDD9-209ENST00000504634 PDE3AQ14432 1141 aa14.85□□□□□ -0.03
NEDD9-209ENST00000504634 FOXP4Q8IVH2 680 aaPredicted RBP14.85□□□□□ -0.03
NEDD9-209ENST00000504634 GPRC5AQ8NFJ5 357 aa14.85□□□□□ -0.03
NEDD9-209ENST00000504634 TGFBRAP1Q8WUH2 860 aa14.85□□□□□ -0.03
NEDD9-209ENST00000504634 CLUAP1Q96AJ1 413 aa14.85□□□□□ -0.03
NEDD9-209ENST00000504634 LRCH3Q96II8 777 aa14.85□□□□□ -0.03
NEDD9-209ENST00000504634 P2RX7Q99572 595 aaKnown RBP14.85□□□□□ -0.03
NEDD9-209ENST00000504634 NUDT12Q9BQG2 462 aa14.85□□□□□ -0.03
NEDD9-209ENST00000504634 COL6A3P12111 3177 aa14.84□□□□□ -0.03
NEDD9-209ENST00000504634 C19orf81C9J6K1 198 aa14.84□□□□□ -0.03
NEDD9-209ENST00000504634 USP17L10C9JJH3 530 aa14.84□□□□□ -0.03
NEDD9-209ENST00000504634 SOX1O00570 391 aaPredicted RBP14.84□□□□□ -0.03
NEDD9-209ENST00000504634 HLA-DOAP06340 250 aa14.84□□□□□ -0.03
NEDD9-209ENST00000504634 PRKAR2AP13861 404 aaKnown RBP14.84□□□□□ -0.03
NEDD9-209ENST00000504634 HOXA7P31268 230 aaPredicted RBP14.84□□□□□ -0.03
NEDD9-209ENST00000504634 HERVK_113P62684 666 aa14.84□□□□□ -0.03
NEDD9-209ENST00000504634 ATF7IPQ6VMQ6 1270 aa14.84□□□□□ -0.03
NEDD9-209ENST00000504634 SOCS4Q8WXH5 440 aa14.84□□□□□ -0.03
NEDD9-209ENST00000504634 TRIB2Q92519 343 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms