RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 IL17RAQ96F46 866 aa23.23■■□□□ 1.31
LINC01550-201ENST00000499006 CSRNP1Q96S65 589 aa23.23■■□□□ 1.31
LINC01550-201ENST00000499006 GPBP1L1Q9HC44 474 aaPredicted RBP23.23■■□□□ 1.31
LINC01550-201ENST00000499006 TACC3Q9Y6A5 838 aa23.23■■□□□ 1.31
LINC01550-201ENST00000499006 KRT26Q7Z3Y9 468 aa23.22■■□□□ 1.31
LINC01550-201ENST00000499006 SULF1Q8IWU6 871 aa23.22■■□□□ 1.31
LINC01550-201ENST00000499006 SNX14Q9Y5W7 946 aa23.22■■□□□ 1.31
LINC01550-201ENST00000499006 FGRP09769 529 aa23.21■■□□□ 1.31
LINC01550-201ENST00000499006 STAG1Q8WVM7 1258 aa23.21■■□□□ 1.31
LINC01550-201ENST00000499006 DYNLL2Q96FJ2 89 aa23.21■■□□□ 1.31
LINC01550-201ENST00000499006 SERPINB13Q9UIV8 391 aa23.21■■□□□ 1.31
LINC01550-201ENST00000499006 TAOK2Q9UL54 1235 aa23.21■■□□□ 1.31
LINC01550-201ENST00000499006 CLEC11AQ9Y240 323 aa23.21■■□□□ 1.31
LINC01550-201ENST00000499006 ATAD5Q96QE3 1844 aa23.2■■□□□ 1.3
LINC01550-201ENST00000499006 ADM5C9JUS6 153 aa23.2■■□□□ 1.3
LINC01550-201ENST00000499006 ZKSCAN1P17029 563 aaPredicted RBP23.2■■□□□ 1.3
LINC01550-201ENST00000499006 ANAPC15P60006 121 aa23.2■■□□□ 1.3
LINC01550-201ENST00000499006 MAP3K10Q02779 954 aa23.2■■□□□ 1.3
LINC01550-201ENST00000499006 AKNAD1Q5T1N1 836 aa23.2■■□□□ 1.3
LINC01550-201ENST00000499006 STOX1Q6ZVD7 989 aa23.2■■□□□ 1.3
LINC01550-201ENST00000499006 C16orf86Q6ZW13 317 aa23.2■■□□□ 1.3
LINC01550-201ENST00000499006 CDC37L1Q7L3B6 337 aa23.2■■□□□ 1.3
LINC01550-201ENST00000499006 FOXP4Q8IVH2 680 aaPredicted RBP23.2■■□□□ 1.3
LINC01550-201ENST00000499006 TRPM7Q96QT4 1865 aa23.19■■□□□ 1.3
LINC01550-201ENST00000499006 E7EWF7 191 aa23.19■■□□□ 1.3
LINC01550-201ENST00000499006 DNAJC18Q9H819 358 aa23.19■■□□□ 1.3
LINC01550-201ENST00000499006 INCENPQ9NQS7 918 aa23.19■■□□□ 1.3
LINC01550-201ENST00000499006 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.19■■□□□ 1.3
LINC01550-201ENST00000499006 KIF3CO14782 793 aa23.18■■□□□ 1.3
LINC01550-201ENST00000499006 TBC1D12O60347 775 aa23.18■■□□□ 1.3
LINC01550-201ENST00000499006 SLC3A2P08195 630 aaKnown RBP23.18■■□□□ 1.3
LINC01550-201ENST00000499006 SLURP2P0DP57 97 aa23.18■■□□□ 1.3
LINC01550-201ENST00000499006 PCP11498 1178 aaKnown RBP23.18■■□□□ 1.3
LINC01550-201ENST00000499006 YY1P25490 414 aa23.18■■□□□ 1.3
LINC01550-201ENST00000499006 NBPF12Q5TAG4 269 aaPredicted RBP23.18■■□□□ 1.3
LINC01550-201ENST00000499006 PRAMEF18Q5VWM3 479 aa23.18■■□□□ 1.3
LINC01550-201ENST00000499006 MAP1SQ66K74 1059 aaPredicted RBP23.18■■□□□ 1.3
LINC01550-201ENST00000499006 USP48Q86UV5 1035 aa23.18■■□□□ 1.3
LINC01550-201ENST00000499006 HERC5Q9UII4 1024 aaKnown RBP23.18■■□□□ 1.3
LINC01550-201ENST00000499006 SSC5DA1L4H1 1573 aa23.18■■□□□ 1.3
LINC01550-201ENST00000499006 GREB1LQ9C091 1923 aaPredicted RBP23.18■■□□□ 1.3
LINC01550-201ENST00000499006 ADCK5Q3MIX3 580 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 DLK2Q6UY11 383 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 MFSD6Q6ZSS7 791 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 STK11IPQ8N1F8 1099 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 SLC44A5Q8NCS7 719 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 KIF2CQ99661 725 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 GLIS2Q9BZE0 524 aaPredicted RBP23.17■■□□□ 1.3
LINC01550-201ENST00000499006 NEDD4P46934 1319 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 PAPPA2Q9BXP8 1791 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 ORC4O43929 436 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 CDK8P49336 464 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 PDE4BQ07343 736 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 KRT32Q14532 448 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 RNF41Q9H4P4 317 aaPredicted RBP23.17■■□□□ 1.3
LINC01550-201ENST00000499006 SWAP70Q9UH65 585 aa23.17■■□□□ 1.3
LINC01550-201ENST00000499006 SHMT1P34896 483 aa23.16■■□□□ 1.3
LINC01550-201ENST00000499006 CRACR2BQ8N4Y2 399 aaPredicted RBP23.16■■□□□ 1.3
LINC01550-201ENST00000499006 FAM196BA6NMK8 535 aa23.15■■□□□ 1.3
LINC01550-201ENST00000499006 SUPT20HL1Q3ZLR7 823 aa23.15■■□□□ 1.3
LINC01550-201ENST00000499006 TATDN1Q6P1N9 297 aa23.15■■□□□ 1.3
LINC01550-201ENST00000499006 NKX2-3Q8TAU0 364 aa23.15■■□□□ 1.3
LINC01550-201ENST00000499006 HOOK2Q96ED9 719 aa23.15■■□□□ 1.3
LINC01550-201ENST00000499006 CNNM2Q9H8M5 875 aa23.15■■□□□ 1.3
LINC01550-201ENST00000499006 OTOFQ9HC10 1997 aa23.15■■□□□ 1.3
LINC01550-201ENST00000499006 CHADLQ6NUI6 762 aa23.14■■□□□ 1.29
LINC01550-201ENST00000499006 MIGA2Q7L4E1 593 aa23.14■■□□□ 1.29
LINC01550-201ENST00000499006 CDCA5Q96FF9 252 aa23.14■■□□□ 1.29
LINC01550-201ENST00000499006 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.14■■□□□ 1.29
LINC01550-201ENST00000499006 ZNF287Q9HBT7 754 aa23.14■■□□□ 1.29
LINC01550-201ENST00000499006 PRDM1O75626 825 aa23.13■■□□□ 1.29
LINC01550-201ENST00000499006 RASA1P20936 1047 aa23.13■■□□□ 1.29
LINC01550-201ENST00000499006 COL9A3Q14050 684 aaPredicted RBP23.13■■□□□ 1.29
LINC01550-201ENST00000499006 ZNF784Q8NCA9 323 aaPredicted RBP23.13■■□□□ 1.29
LINC01550-201ENST00000499006 NCOA7Q8NI08 942 aa23.13■■□□□ 1.29
LINC01550-201ENST00000499006 NEK1Q96PY6 1258 aa23.13■■□□□ 1.29
LINC01550-201ENST00000499006 TM6SF1Q9BZW5 370 aa23.13■■□□□ 1.29
LINC01550-201ENST00000499006 KRT23Q9C075 422 aa23.13■■□□□ 1.29
LINC01550-201ENST00000499006 MKNK2Q9HBH9 465 aa23.13■■□□□ 1.29
LINC01550-201ENST00000499006 DOCK1Q14185 1865 aa23.13■■□□□ 1.29
LINC01550-201ENST00000499006 B4E1Z4 1266 aa23.12■■□□□ 1.29
LINC01550-201ENST00000499006 NT5C2P49902 561 aa23.12■■□□□ 1.29
LINC01550-201ENST00000499006 TRDNQ13061 729 aa23.12■■□□□ 1.29
LINC01550-201ENST00000499006 MB21D2Q8IYB1 491 aaPredicted RBP23.12■■□□□ 1.29
LINC01550-201ENST00000499006 JAKMIP1Q96N16 626 aaKnown RBP23.12■■□□□ 1.29
LINC01550-201ENST00000499006 TRIM34Q9BYJ4 488 aa23.12■■□□□ 1.29
LINC01550-201ENST00000499006 PHF20L1A8MW92 1017 aa23.11■■□□□ 1.29
LINC01550-201ENST00000499006 ITGBL1O95965 494 aaPredicted RBP23.11■■□□□ 1.29
LINC01550-201ENST00000499006 DCAF15Q66K64 600 aa23.11■■□□□ 1.29
LINC01550-201ENST00000499006 ZSWIM6Q9HCJ5 1215 aa23.11■■□□□ 1.29
LINC01550-201ENST00000499006 MYH4Q9Y623 1939 aa23.11■■□□□ 1.29
LINC01550-201ENST00000499006 TRAF5O00463 557 aa23.11■■□□□ 1.29
LINC01550-201ENST00000499006 PSMA5P28066 241 aa23.11■■□□□ 1.29
LINC01550-201ENST00000499006 RRP1BQ14684 758 aaKnown RBP23.11■■□□□ 1.29
LINC01550-201ENST00000499006 RRP12Q5JTH9 1297 aaKnown RBP23.11■■□□□ 1.29
LINC01550-201ENST00000499006 TOMM22Q9NS69 142 aa23.11■■□□□ 1.29
LINC01550-201ENST00000499006 ZSWIM5Q9P217 1185 aa23.11■■□□□ 1.29
LINC01550-201ENST00000499006 HMGB1P09429 215 aaKnown RBP23.1■■□□□ 1.29
LINC01550-201ENST00000499006 CASTP20810 708 aaKnown RBP23.1■■□□□ 1.29
LINC01550-201ENST00000499006 RALYLQ86SE5 291 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms