RNA–Protein interactions for RNA: ENST00000497216.2

SPTAN1-209, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 351 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-209ENST00000497216 PNMA3Q9UL41 463 aa16.68■□□□□ 0.26
SPTAN1-209ENST00000497216 TNPO2O14787 897 aaKnown RBP16.67■□□□□ 0.26
SPTAN1-209ENST00000497216 IPO8O15397 1037 aaKnown RBP16.67■□□□□ 0.26
SPTAN1-209ENST00000497216 SGPL1O95470 568 aa16.67■□□□□ 0.26
SPTAN1-209ENST00000497216 GNAI2P04899 355 aa16.67■□□□□ 0.26
SPTAN1-209ENST00000497216 TRIM27P14373 513 aa16.67■□□□□ 0.26
SPTAN1-209ENST00000497216 PI16Q6UXB8 463 aa16.67■□□□□ 0.26
SPTAN1-209ENST00000497216 DPF3Q92784 378 aa16.67■□□□□ 0.26
SPTAN1-209ENST00000497216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.67■□□□□ 0.26
SPTAN1-209ENST00000497216 CCER2I3L3R5 266 aa16.66■□□□□ 0.26
SPTAN1-209ENST00000497216 FARP2O94887 1054 aaPredicted RBP16.66■□□□□ 0.26
SPTAN1-209ENST00000497216 UQCRFS1P1P0C7P4 283 aa16.66■□□□□ 0.26
SPTAN1-209ENST00000497216 MCAMP43121 646 aa16.66■□□□□ 0.26
SPTAN1-209ENST00000497216 TREML2Q5T2D2 321 aa16.66■□□□□ 0.26
SPTAN1-209ENST00000497216 GORABQ5T7V8 394 aa16.66■□□□□ 0.26
SPTAN1-209ENST00000497216 CCDC84Q86UT8 332 aaPredicted RBP16.66■□□□□ 0.26
SPTAN1-209ENST00000497216 HERC5Q9UII4 1024 aaKnown RBP16.66■□□□□ 0.26
SPTAN1-209ENST00000497216 MYH1P12882 1939 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 PNMA6EA0A0J9YXQ4 647 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 INHAP05111 366 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 ELNP15502 786 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 CAP2P40123 477 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 GCLCP48506 637 aaPredicted RBP16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 SH3D19Q5HYK7 790 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 ATF7IPQ6VMQ6 1270 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 CHRDL2Q6WN34 429 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 TBC1D9Q6ZT07 1266 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 ANKRD13CQ8N6S4 541 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 ZNF280CQ8ND82 737 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 COA7Q96BR5 231 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 PRO3102Q9H379 93 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 GPR108Q9NPR9 543 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 PAK6Q9NQU5 681 aaPredicted RBP16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 RAI14Q9P0K7 980 aa16.65■□□□□ 0.26
SPTAN1-209ENST00000497216 IGSF3O75054 1194 aa16.64■□□□□ 0.25
SPTAN1-209ENST00000497216 SPP2Q13103 211 aa16.64■□□□□ 0.25
SPTAN1-209ENST00000497216 G3BP1Q13283 466 aaKnown RBP eCLIP16.64■□□□□ 0.25
SPTAN1-209ENST00000497216 PABPC4Q13310 644 aaKnown RBP eCLIP16.64■□□□□ 0.25
SPTAN1-209ENST00000497216 NR2E3Q9Y5X4 410 aa16.64■□□□□ 0.25
SPTAN1-209ENST00000497216 USP17L5A8MUK1 530 aa16.63■□□□□ 0.25
SPTAN1-209ENST00000497216 RRP1BQ14684 758 aaKnown RBP16.63■□□□□ 0.25
SPTAN1-209ENST00000497216 TEX11Q8IYF3 940 aa16.63■□□□□ 0.25
SPTAN1-209ENST00000497216 CRISPLD2Q9H0B8 497 aa16.63■□□□□ 0.25
SPTAN1-209ENST00000497216 DHX36Q9H2U1 1008 aaKnown RBP16.63■□□□□ 0.25
SPTAN1-209ENST00000497216 RBM27Q9P2N5 1060 aaKnown RBP16.63■□□□□ 0.25
SPTAN1-209ENST00000497216 RANBP2P49792 3224 aaKnown RBP16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 ZBTB7BO15156 539 aaPredicted RBP16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 PLCG2P16885 1265 aa16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 HMGCS2P54868 508 aa16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 PPP4CP60510 307 aa16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 POLA2Q14181 598 aa16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 METTL16Q86W50 562 aaKnown RBP16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 DEFB118Q96PH6 123 aa16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 NOL10Q9BSC4 688 aaKnown RBP16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 WDR18Q9BV38 432 aa16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 ASCC2Q9H1I8 757 aaPredicted RBP16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 AS3MTQ9HBK9 375 aa16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 LRP2BPQ9P2M1 347 aa16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 PI4KBQ9UBF8 816 aa16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 TNNQ9UQP3 1299 aa16.62■□□□□ 0.25
SPTAN1-209ENST00000497216 SH3RF3Q8TEJ3 882 aaPredicted RBP16.61■□□□□ 0.25
SPTAN1-209ENST00000497216 ZNF512BQ96KM6 892 aaPredicted RBP16.61■□□□□ 0.25
SPTAN1-209ENST00000497216 GINM1Q9NU53 330 aa16.61■□□□□ 0.25
SPTAN1-209ENST00000497216 MORF4L1Q9UBU8 362 aa16.61■□□□□ 0.25
SPTAN1-209ENST00000497216 DDX60LQ5H9U9 1706 aaKnown RBP16.61■□□□□ 0.25
SPTAN1-209ENST00000497216 A0A1W2PPC1 479 aa16.6■□□□□ 0.25
SPTAN1-209ENST00000497216 BCAR3O75815 825 aa16.6■□□□□ 0.25
SPTAN1-209ENST00000497216 BAG3O95817 575 aa16.6■□□□□ 0.25
SPTAN1-209ENST00000497216 HMGCRP04035 888 aa16.6■□□□□ 0.25
SPTAN1-209ENST00000497216 ASNSP08243 561 aa16.6■□□□□ 0.25
SPTAN1-209ENST00000497216 NAA16Q6N069 864 aaPredicted RBP16.6■□□□□ 0.25
SPTAN1-209ENST00000497216 SSH3Q8TE77 659 aa16.6■□□□□ 0.25
SPTAN1-209ENST00000497216 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.6■□□□□ 0.25
SPTAN1-209ENST00000497216 GJD2Q9UKL4 321 aa16.6■□□□□ 0.25
SPTAN1-209ENST00000497216 TFRCP02786 760 aaKnown RBP16.59■□□□□ 0.25
SPTAN1-209ENST00000497216 HOXA7P31268 230 aaPredicted RBP16.59■□□□□ 0.25
SPTAN1-209ENST00000497216 TNNI3KQ59H18 835 aa16.59■□□□□ 0.25
SPTAN1-209ENST00000497216 ANKLE1Q8NAG6 615 aa16.59■□□□□ 0.25
SPTAN1-209ENST00000497216 FRAT1Q92837 279 aaPredicted RBP16.59■□□□□ 0.25
SPTAN1-209ENST00000497216 DNAJC18Q9H819 358 aa16.59■□□□□ 0.25
SPTAN1-209ENST00000497216 AATFQ9NY61 560 aaKnown RBP eCLIP16.59■□□□□ 0.25
SPTAN1-209ENST00000497216 FPGT-TNNI3KV9GXZ4 949 aa16.59■□□□□ 0.25
SPTAN1-209ENST00000497216 SZT2Q5T011 3432 aa16.58■□□□□ 0.24
SPTAN1-209ENST00000497216 CYP2E1P05181 493 aaPredicted RBP16.58■□□□□ 0.24
SPTAN1-209ENST00000497216 BACE1P56817 501 aa16.58■□□□□ 0.24
SPTAN1-209ENST00000497216 CCDC158Q5M9N0 1113 aa16.58■□□□□ 0.24
SPTAN1-209ENST00000497216 TTC39AQ5SRH9 613 aa16.58■□□□□ 0.24
SPTAN1-209ENST00000497216 ADGRA1Q86SQ6 560 aa16.58■□□□□ 0.24
SPTAN1-209ENST00000497216 FOXP4Q8IVH2 680 aaPredicted RBP16.58■□□□□ 0.24
SPTAN1-209ENST00000497216 TMEM57Q8N5G2 664 aa16.58■□□□□ 0.24
SPTAN1-209ENST00000497216 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.24
SPTAN1-209ENST00000497216 DBNDD2Q9BQY9 259 aa16.58■□□□□ 0.24
SPTAN1-209ENST00000497216 FLT1P17948 1338 aa16.58■□□□□ 0.24
SPTAN1-209ENST00000497216 FRMPD3Q5JV73 1810 aa16.58■□□□□ 0.24
SPTAN1-209ENST00000497216 RPTORQ8N122 1335 aa16.57■□□□□ 0.24
SPTAN1-209ENST00000497216 C19orf81C9J6K1 198 aa16.57■□□□□ 0.24
SPTAN1-209ENST00000497216 EVI5O60447 810 aa16.57■□□□□ 0.24
SPTAN1-209ENST00000497216 ATP8B2P98198 1209 aa16.57■□□□□ 0.24
SPTAN1-209ENST00000497216 MTMR2Q13614 643 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms