RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 OTOFQ9HC10 1997 aa16.58■□□□□ 0.25
ATPAF2-208ENST00000496852 PAPPA2Q9BXP8 1791 aa16.58■□□□□ 0.25
ATPAF2-208ENST00000496852 HLA-DOAP06340 250 aa16.58■□□□□ 0.24
ATPAF2-208ENST00000496852 GABPAQ06546 454 aa16.58■□□□□ 0.24
ATPAF2-208ENST00000496852 IL17RAQ96F46 866 aa16.58■□□□□ 0.24
ATPAF2-208ENST00000496852 EHD4Q9H223 541 aa16.58■□□□□ 0.24
ATPAF2-208ENST00000496852 PI4KBQ9UBF8 816 aa16.58■□□□□ 0.24
ATPAF2-208ENST00000496852 RBM19Q9Y4C8 960 aaKnown RBP16.58■□□□□ 0.24
ATPAF2-208ENST00000496852 FGRP09769 529 aa16.57■□□□□ 0.24
ATPAF2-208ENST00000496852 ZKSCAN1P17029 563 aaPredicted RBP16.57■□□□□ 0.24
ATPAF2-208ENST00000496852 ANAPC15P60006 121 aa16.57■□□□□ 0.24
ATPAF2-208ENST00000496852 STOX1Q6ZVD7 989 aa16.57■□□□□ 0.24
ATPAF2-208ENST00000496852 METTL16Q86W50 562 aaKnown RBP16.57■□□□□ 0.24
ATPAF2-208ENST00000496852 SULF1Q8IWU6 871 aa16.57■□□□□ 0.24
ATPAF2-208ENST00000496852 STAG1Q8WVM7 1258 aa16.57■□□□□ 0.24
ATPAF2-208ENST00000496852 CSRNP1Q96S65 589 aa16.57■□□□□ 0.24
ATPAF2-208ENST00000496852 GPBP1L1Q9HC44 474 aaPredicted RBP16.57■□□□□ 0.24
ATPAF2-208ENST00000496852 DOCK1Q14185 1865 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 AKNAD1Q5T1N1 836 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 C16orf86Q6ZW13 317 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 KRT26Q7Z3Y9 468 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 LDHDQ86WU2 507 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 FOXP4Q8IVH2 680 aaPredicted RBP16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 DYNLL2Q96FJ2 89 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 SERPINB13Q9UIV8 391 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 MYH4Q9Y623 1939 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 SSC5DA1L4H1 1573 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 ADM5C9JUS6 153 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 E7EWF7 191 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 STK11IPQ8N1F8 1099 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 DNAJC18Q9H819 358 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 TAOK2Q9UL54 1235 aa16.56■□□□□ 0.24
ATPAF2-208ENST00000496852 SLC3A2P08195 630 aaKnown RBP16.55■□□□□ 0.24
ATPAF2-208ENST00000496852 SLURP2P0DP57 97 aa16.55■□□□□ 0.24
ATPAF2-208ENST00000496852 PCP11498 1178 aaKnown RBP16.55■□□□□ 0.24
ATPAF2-208ENST00000496852 MAP3K10Q02779 954 aa16.55■□□□□ 0.24
ATPAF2-208ENST00000496852 ADCK5Q3MIX3 580 aa16.55■□□□□ 0.24
ATPAF2-208ENST00000496852 NBPF12Q5TAG4 269 aaPredicted RBP16.55■□□□□ 0.24
ATPAF2-208ENST00000496852 CDC37L1Q7L3B6 337 aa16.55■□□□□ 0.24
ATPAF2-208ENST00000496852 KIF2CQ99661 725 aa16.55■□□□□ 0.24
ATPAF2-208ENST00000496852 RNF41Q9H4P4 317 aaPredicted RBP16.55■□□□□ 0.24
ATPAF2-208ENST00000496852 INCENPQ9NQS7 918 aa16.55■□□□□ 0.24
ATPAF2-208ENST00000496852 NEDD4P46934 1319 aa16.55■□□□□ 0.24
ATPAF2-208ENST00000496852 TBC1D12O60347 775 aa16.54■□□□□ 0.24
ATPAF2-208ENST00000496852 CDK8P49336 464 aa16.54■□□□□ 0.24
ATPAF2-208ENST00000496852 PDE4BQ07343 736 aa16.54■□□□□ 0.24
ATPAF2-208ENST00000496852 KRT32Q14532 448 aa16.54■□□□□ 0.24
ATPAF2-208ENST00000496852 PRAMEF18Q5VWM3 479 aa16.54■□□□□ 0.24
ATPAF2-208ENST00000496852 MAP1SQ66K74 1059 aaPredicted RBP16.54■□□□□ 0.24
ATPAF2-208ENST00000496852 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
ATPAF2-208ENST00000496852 USP48Q86UV5 1035 aa16.54■□□□□ 0.24
ATPAF2-208ENST00000496852 SLC44A5Q8NCS7 719 aa16.54■□□□□ 0.24
ATPAF2-208ENST00000496852 GLIS2Q9BZE0 524 aaPredicted RBP16.54■□□□□ 0.24
ATPAF2-208ENST00000496852 SWAP70Q9UH65 585 aa16.54■□□□□ 0.24
ATPAF2-208ENST00000496852 HERC5Q9UII4 1024 aaKnown RBP16.54■□□□□ 0.24
ATPAF2-208ENST00000496852 FAM196BA6NMK8 535 aa16.53■□□□□ 0.24
ATPAF2-208ENST00000496852 KIF3CO14782 793 aa16.53■□□□□ 0.24
ATPAF2-208ENST00000496852 ORC4O43929 436 aa16.53■□□□□ 0.24
ATPAF2-208ENST00000496852 DLK2Q6UY11 383 aa16.53■□□□□ 0.24
ATPAF2-208ENST00000496852 CRACR2BQ8N4Y2 399 aaPredicted RBP16.53■□□□□ 0.24
ATPAF2-208ENST00000496852 NKX2-3Q8TAU0 364 aa16.53■□□□□ 0.24
ATPAF2-208ENST00000496852 PHIPQ8WWQ0 1821 aa16.53■□□□□ 0.24
ATPAF2-208ENST00000496852 YY1P25490 414 aa16.53■□□□□ 0.24
ATPAF2-208ENST00000496852 SHMT1P34896 483 aa16.53■□□□□ 0.24
ATPAF2-208ENST00000496852 COL9A3Q14050 684 aaPredicted RBP16.53■□□□□ 0.24
ATPAF2-208ENST00000496852 NCOA7Q8NI08 942 aa16.53■□□□□ 0.24
ATPAF2-208ENST00000496852 CNNM2Q9H8M5 875 aa16.53■□□□□ 0.24
ATPAF2-208ENST00000496852 PRDM1O75626 825 aa16.52■□□□□ 0.23
ATPAF2-208ENST00000496852 SUPT20HL1Q3ZLR7 823 aa16.52■□□□□ 0.23
ATPAF2-208ENST00000496852 TATDN1Q6P1N9 297 aa16.52■□□□□ 0.23
ATPAF2-208ENST00000496852 HOOK2Q96ED9 719 aa16.52■□□□□ 0.23
ATPAF2-208ENST00000496852 CDCA5Q96FF9 252 aa16.52■□□□□ 0.23
ATPAF2-208ENST00000496852 JAKMIP1Q96N16 626 aaKnown RBP16.52■□□□□ 0.23
ATPAF2-208ENST00000496852 NEK1Q96PY6 1258 aa16.52■□□□□ 0.23
ATPAF2-208ENST00000496852 TM6SF1Q9BZW5 370 aa16.52■□□□□ 0.23
ATPAF2-208ENST00000496852 KRT23Q9C075 422 aa16.52■□□□□ 0.23
ATPAF2-208ENST00000496852 ZNF287Q9HBT7 754 aa16.52■□□□□ 0.23
ATPAF2-208ENST00000496852 B4E1Z4 1266 aa16.51■□□□□ 0.23
ATPAF2-208ENST00000496852 RASA1P20936 1047 aa16.51■□□□□ 0.23
ATPAF2-208ENST00000496852 TRDNQ13061 729 aa16.51■□□□□ 0.23
ATPAF2-208ENST00000496852 CHADLQ6NUI6 762 aa16.51■□□□□ 0.23
ATPAF2-208ENST00000496852 MIGA2Q7L4E1 593 aa16.51■□□□□ 0.23
ATPAF2-208ENST00000496852 MB21D2Q8IYB1 491 aaPredicted RBP16.51■□□□□ 0.23
ATPAF2-208ENST00000496852 TRIM34Q9BYJ4 488 aa16.51■□□□□ 0.23
ATPAF2-208ENST00000496852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.51■□□□□ 0.23
ATPAF2-208ENST00000496852 MKNK2Q9HBH9 465 aa16.51■□□□□ 0.23
ATPAF2-208ENST00000496852 PSMA5P28066 241 aa16.5■□□□□ 0.23
ATPAF2-208ENST00000496852 NT5C2P49902 561 aa16.5■□□□□ 0.23
ATPAF2-208ENST00000496852 RRP12Q5JTH9 1297 aaKnown RBP16.5■□□□□ 0.23
ATPAF2-208ENST00000496852 RALYLQ86SE5 291 aaKnown RBP16.5■□□□□ 0.23
ATPAF2-208ENST00000496852 ZSWIM6Q9HCJ5 1215 aa16.5■□□□□ 0.23
ATPAF2-208ENST00000496852 TOMM22Q9NS69 142 aa16.5■□□□□ 0.23
ATPAF2-208ENST00000496852 KDM4AO75164 1064 aa16.5■□□□□ 0.23
ATPAF2-208ENST00000496852 CASTP20810 708 aaKnown RBP16.5■□□□□ 0.23
ATPAF2-208ENST00000496852 ANP32AP39687 249 aaKnown RBP16.5■□□□□ 0.23
ATPAF2-208ENST00000496852 DCAF15Q66K64 600 aa16.5■□□□□ 0.23
ATPAF2-208ENST00000496852 ESR2Q92731 530 aa16.5■□□□□ 0.23
ATPAF2-208ENST00000496852 PLIN4Q96Q06 1357 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms