RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 DNAI1Q9UI46 699 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 ALS2Q96Q42 1657 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 SSBP05455 408 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNED1-211ENST00000491761 MYL5Q02045 173 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 MCM6Q14566 821 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
SNED1-211ENST00000491761 ZNF622Q969S3 477 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNED1-211ENST00000491761 CDC5LQ99459 802 aaKnown RBP12.28□□□□□ -0.44
SNED1-211ENST00000491761 TANGO6Q9C0B7 1094 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 KCNH3Q9ULD8 1083 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 ADAMTS7Q9UKP4 1686 aa12.28□□□□□ -0.44
SNED1-211ENST00000491761 KIF28PB7ZC32 967 aa12.27□□□□□ -0.44
SNED1-211ENST00000491761 PPP6R2O75170 966 aa12.27□□□□□ -0.44
SNED1-211ENST00000491761 ERLIN1O75477 346 aa12.27□□□□□ -0.44
SNED1-211ENST00000491761 ATP6V1AP38606 617 aa12.27□□□□□ -0.44
SNED1-211ENST00000491761 FANCCQ00597 558 aa12.27□□□□□ -0.44
SNED1-211ENST00000491761 CCDC181Q5TID7 509 aa12.27□□□□□ -0.44
SNED1-211ENST00000491761 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.44
SNED1-211ENST00000491761 PRM3Q9NNZ6 103 aa12.27□□□□□ -0.44
SNED1-211ENST00000491761 GNG11P61952 73 aa12.27□□□□□ -0.45
SNED1-211ENST00000491761 ARID5BQ14865 1188 aa12.27□□□□□ -0.45
SNED1-211ENST00000491761 PARP10Q53GL7 1025 aa12.27□□□□□ -0.45
SNED1-211ENST00000491761 CT47A1Q5JQC4 288 aaPredicted RBP12.27□□□□□ -0.45
SNED1-211ENST00000491761 TAX1BP1Q86VP1 789 aa12.27□□□□□ -0.45
SNED1-211ENST00000491761 ZKSCAN3Q9BRR0 538 aa12.27□□□□□ -0.45
SNED1-211ENST00000491761 NIP7Q9Y221 180 aaKnown RBP eCLIP12.27□□□□□ -0.45
SNED1-211ENST00000491761 ZNF335Q9H4Z2 1342 aaPredicted RBP12.27□□□□□ -0.45
SNED1-211ENST00000491761 PHACTR2O75167 634 aa12.27□□□□□ -0.45
SNED1-211ENST00000491761 MAGEC2Q9UBF1 373 aaPredicted RBP12.27□□□□□ -0.45
SNED1-211ENST00000491761 ALX1Q15699 326 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 DIS3L2Q8IYB7 885 aaKnown RBP12.26□□□□□ -0.45
SNED1-211ENST00000491761 ESR2Q92731 530 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 ZNHIT6Q9NWK9 470 aaKnown RBP12.26□□□□□ -0.45
SNED1-211ENST00000491761 USP21Q9UK80 565 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 ARFGEF2Q9Y6D5 1785 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 EIF3JO75822 258 aaKnown RBP12.26□□□□□ -0.45
SNED1-211ENST00000491761 ARID4AP29374 1257 aaPredicted RBP12.26□□□□□ -0.45
SNED1-211ENST00000491761 LIFRP42702 1097 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 CAVIN4Q5BKX8 364 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 RILPL1Q5EBL4 403 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 GPATCH11Q8N954 259 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 BPIFA3Q9BQP9 254 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 CCDC87Q9NVE4 849 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 IQSEC3Q9UPP2 1182 aaPredicted RBP12.26□□□□□ -0.45
SNED1-211ENST00000491761 RFC4P35249 363 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 ODF2Q5BJF6 829 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 FAM182BQ5T319 152 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 CDK5RAP3Q96JB5 506 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 KIAA0754O94854 1291 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 DEXIO95424 95 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 KANK3Q6NY19 840 aa12.26□□□□□ -0.45
SNED1-211ENST00000491761 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNED1-211ENST00000491761 EIF5P55010 431 aaKnown RBP12.25□□□□□ -0.45
SNED1-211ENST00000491761 RASGRF1Q13972 1273 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 JAKMIP3Q5VZ66 844 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 NOSTRINQ8IVI9 506 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 ZSWIM5Q9P217 1185 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 NEDD4P46934 1319 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 IKBKBO14920 756 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 RANBP6O60518 1105 aaKnown RBP12.25□□□□□ -0.45
SNED1-211ENST00000491761 CDC27P30260 824 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 PNOCQ13519 176 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 CATIPQ7Z7H3 387 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 IQCA1Q86XH1 822 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 CLIC6Q96NY7 704 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 CRACR2AQ9BSW2 395 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 MAGEB6P1A0A0J9YX57 407 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 TUBB4AP04350 444 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 RGS22Q8NE09 1264 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 FAM107BQ9H098 131 aa12.25□□□□□ -0.45
SNED1-211ENST00000491761 FMNL1O95466 1100 aaPredicted RBP12.24□□□□□ -0.45
SNED1-211ENST00000491761 MATR3P43243 847 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNED1-211ENST00000491761 BCAMP50895 628 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 SGMS1Q86VZ5 419 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 ZSCAN29Q8IWY8 852 aaPredicted RBP12.24□□□□□ -0.45
SNED1-211ENST00000491761 LY9Q9HBG7 655 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 KCNJ14Q9UNX9 436 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 BTBD18B2RXH4 712 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 ZSCAN12O43309 604 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 SLU7O95391 586 aaKnown RBP12.24□□□□□ -0.45
SNED1-211ENST00000491761 IFNAR1P17181 557 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 KIAA1328Q86T90 577 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 RTL9Q8NET4 1388 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 WDHD1O75717 1129 aaPredicted RBP12.24□□□□□ -0.45
SNED1-211ENST00000491761 KRBA2Q6ZNG9 492 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 ANKRD18AQ8IVF6 992 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 SEC31BQ9NQW1 1179 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 CALCOCO1Q9P1Z2 691 aa12.24□□□□□ -0.45
SNED1-211ENST00000491761 SMAP1Q8IYB5 467 aaPredicted RBP12.23□□□□□ -0.45
SNED1-211ENST00000491761 KRT222Q8N1A0 295 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 IGDCC4Q8TDY8 1250 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 OSBPL5Q9H0X9 879 aaPredicted RBP12.23□□□□□ -0.45
SNED1-211ENST00000491761 INCENPQ9NQS7 918 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 DENND2AQ9ULE3 1009 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 TNS2Q63HR2 1409 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 FOXP2O15409 715 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 PRKAB2O43741 272 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 SYCP1Q15431 976 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 SPECC1Q5M775 1068 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms