RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 NOLC1Q14978 699 aaKnown RBP eCLIP17.3■□□□□ 0.36
COL9A1-208ENST00000489611 RTN1Q16799 776 aa17.3■□□□□ 0.36
COL9A1-208ENST00000489611 OTUD7BQ6GQQ9 843 aa17.3■□□□□ 0.36
COL9A1-208ENST00000489611 MRFAP1L1Q96HT8 127 aa17.3■□□□□ 0.36
COL9A1-208ENST00000489611 FAM84BQ96KN1 310 aaPredicted RBP17.3■□□□□ 0.36
COL9A1-208ENST00000489611 KIAA1468Q9P260 1216 aa17.3■□□□□ 0.36
COL9A1-208ENST00000489611 MAST2Q6P0Q8 1798 aa17.3■□□□□ 0.36
COL9A1-208ENST00000489611 TM4SF1P30408 202 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 DHX8Q14562 1220 aaKnown RBP17.29■□□□□ 0.36
COL9A1-208ENST00000489611 RIOK1Q9BRS2 568 aaKnown RBP17.29■□□□□ 0.36
COL9A1-208ENST00000489611 FOXP1Q9H334 677 aaPredicted RBP17.29■□□□□ 0.36
COL9A1-208ENST00000489611 ANO8Q9HCE9 1232 aaPredicted RBP17.29■□□□□ 0.36
COL9A1-208ENST00000489611 TOMM22Q9NS69 142 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 KIF28PB7ZC32 967 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 PRKAB2O43741 272 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 PPFIA3O75145 1194 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 FGRP09769 529 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 CALM1P0DP23 149 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 CALM2P0DP24 149 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 CALM3P0DP25 149 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 XBP1P17861 261 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 GYG1P46976 350 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 NDUFA8P51970 172 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 DEFB132Q7Z7B7 95 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 ELOA2Q8IYF1 753 aaPredicted RBP17.29■□□□□ 0.36
COL9A1-208ENST00000489611 KIAA1551Q9HCM1 1747 aa17.29■□□□□ 0.36
COL9A1-208ENST00000489611 CCDC88AQ3V6T2 1871 aa17.28■□□□□ 0.36
COL9A1-208ENST00000489611 NEMFO60524 1076 aa17.28■□□□□ 0.36
COL9A1-208ENST00000489611 AXDND1Q5T1B0 1012 aaPredicted RBP17.28■□□□□ 0.36
COL9A1-208ENST00000489611 RAB11FIP4Q86YS3 637 aa17.28■□□□□ 0.36
COL9A1-208ENST00000489611 CNBD1Q8NA66 436 aa17.28■□□□□ 0.36
COL9A1-208ENST00000489611 MIGA1Q8NAN2 632 aa17.28■□□□□ 0.36
COL9A1-208ENST00000489611 PHKBQ93100 1093 aa17.28■□□□□ 0.36
COL9A1-208ENST00000489611 SLC26A6Q9BXS9 759 aa17.28■□□□□ 0.36
COL9A1-208ENST00000489611 TTC12Q9H892 705 aaPredicted RBP17.28■□□□□ 0.36
COL9A1-208ENST00000489611 MORC2Q9Y6X9 1032 aaPredicted RBP17.28■□□□□ 0.36
COL9A1-208ENST00000489611 COL4A1P02462 1669 aa17.28■□□□□ 0.36
COL9A1-208ENST00000489611 A0A1B0GVL5 298 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 RANBP6O60518 1105 aaKnown RBP17.27■□□□□ 0.36
COL9A1-208ENST00000489611 CUTAO60888 179 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 ZNF202O95125 648 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 MMP1P03956 469 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 SERPINB2P05120 415 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 DDR1Q08345 913 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 RILPL1Q5EBL4 403 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 RRP12Q5JTH9 1297 aaKnown RBP17.27■□□□□ 0.36
COL9A1-208ENST00000489611 SPTY2D1Q68D10 685 aaPredicted RBP17.27■□□□□ 0.36
COL9A1-208ENST00000489611 PRR5LQ6MZQ0 368 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 IQCA1Q86XH1 822 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 NOSTRINQ8IVI9 506 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 FANCBQ8NB91 859 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 KIAA1524Q8TCG1 905 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 PRIMPOLQ96LW4 560 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.27■□□□□ 0.36
COL9A1-208ENST00000489611 RNF26Q9BY78 433 aaPredicted RBP17.27■□□□□ 0.36
COL9A1-208ENST00000489611 DUOX1Q9NRD9 1551 aa17.27■□□□□ 0.36
COL9A1-208ENST00000489611 COL1A1P02452 1464 aaPredicted RBP17.27■□□□□ 0.35
COL9A1-208ENST00000489611 SLC3A2P08195 630 aaKnown RBP17.27■□□□□ 0.35
COL9A1-208ENST00000489611 HIBADHP31937 336 aaKnown RBP17.27■□□□□ 0.35
COL9A1-208ENST00000489611 TPM4P67936 248 aa17.27■□□□□ 0.35
COL9A1-208ENST00000489611 SF3B2Q13435 895 aaKnown RBP17.27■□□□□ 0.35
COL9A1-208ENST00000489611 DRC7Q8IY82 874 aa17.27■□□□□ 0.35
COL9A1-208ENST00000489611 ZNF654Q8IZM8 581 aa17.27■□□□□ 0.35
COL9A1-208ENST00000489611 CRACR2BQ8N4Y2 399 aaPredicted RBP17.27■□□□□ 0.35
COL9A1-208ENST00000489611 SENP2Q9HC62 589 aa17.27■□□□□ 0.35
COL9A1-208ENST00000489611 ATP8A2Q9NTI2 1148 aa17.27■□□□□ 0.35
COL9A1-208ENST00000489611 RBM28Q9NW13 759 aaKnown RBP17.27■□□□□ 0.35
COL9A1-208ENST00000489611 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.27■□□□□ 0.35
COL9A1-208ENST00000489611 DLEC1Q9Y238 1755 aa17.27■□□□□ 0.35
COL9A1-208ENST00000489611 PTPAQ15257 358 aa17.26■□□□□ 0.35
COL9A1-208ENST00000489611 CELF1Q92879 486 aaKnown RBP17.26■□□□□ 0.35
COL9A1-208ENST00000489611 MAP3K14Q99558 947 aa17.26■□□□□ 0.35
COL9A1-208ENST00000489611 HOOK1Q9UJC3 728 aaKnown RBP17.26■□□□□ 0.35
COL9A1-208ENST00000489611 CEP131Q9UPN4 1083 aa17.26■□□□□ 0.35
COL9A1-208ENST00000489611 POLRMTO00411 1230 aaKnown RBP17.25■□□□□ 0.35
COL9A1-208ENST00000489611 PFKFB1P16118 471 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 RXRAP19793 462 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 SEC23AQ15436 765 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 CRNKL1Q9BZJ0 848 aaKnown RBP17.25■□□□□ 0.35
COL9A1-208ENST00000489611 HPSEQ9Y251 543 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 R3HCC1Q9Y3T6 440 aaKnown RBP17.25■□□□□ 0.35
COL9A1-208ENST00000489611 TAF1P21675 1872 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 SMTNL1A8MU46 457 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 SYKP43405 635 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 BAG6P46379 1132 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 AKAP17AQ02040 695 aaKnown RBP17.25■□□□□ 0.35
COL9A1-208ENST00000489611 DNTTIP2Q5QJE6 756 aaKnown RBP17.25■□□□□ 0.35
COL9A1-208ENST00000489611 C11orf57Q6ZUT1 292 aaPredicted RBP17.25■□□□□ 0.35
COL9A1-208ENST00000489611 ADGRA1Q86SQ6 560 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 NBPF11Q86T75 865 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 FLAD1Q8NFF5 587 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 NKX2-3Q8TAU0 364 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 NSUN4Q96CB9 384 aaKnown RBP17.25■□□□□ 0.35
COL9A1-208ENST00000489611 ZSCAN10Q96SZ4 725 aaPredicted RBP17.25■□□□□ 0.35
COL9A1-208ENST00000489611 CLIP2Q9UDT6 1046 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 TACC3Q9Y6A5 838 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 TNKSO95271 1327 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 LAMB1P07942 1786 aa17.25■□□□□ 0.35
COL9A1-208ENST00000489611 MINDY4BA8MYZ0 360 aa17.24■□□□□ 0.35
COL9A1-208ENST00000489611 MYO1BO43795 1136 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms