RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 TBC1D9Q6ZT07 1266 aa14.67□□□□□ -0.06
SFXN3-207ENST00000489434 TEX11Q8IYF3 940 aa14.67□□□□□ -0.06
SFXN3-207ENST00000489434 ANKRD13CQ8N6S4 541 aa14.67□□□□□ -0.06
SFXN3-207ENST00000489434 ZNF280CQ8ND82 737 aa14.67□□□□□ -0.06
SFXN3-207ENST00000489434 FRAT1Q92837 279 aaPredicted RBP14.67□□□□□ -0.06
SFXN3-207ENST00000489434 NSUN4Q96CB9 384 aaKnown RBP14.67□□□□□ -0.06
SFXN3-207ENST00000489434 UNC93B1Q9H1C4 597 aa14.67□□□□□ -0.06
SFXN3-207ENST00000489434 COL2A1P02458 1487 aaPredicted RBP14.67□□□□□ -0.06
SFXN3-207ENST00000489434 PHIPQ8WWQ0 1821 aa14.66□□□□□ -0.06
SFXN3-207ENST00000489434 CCER2I3L3R5 266 aa14.66□□□□□ -0.06
SFXN3-207ENST00000489434 SGPL1O95470 568 aa14.66□□□□□ -0.06
SFXN3-207ENST00000489434 BAG3O95817 575 aa14.66□□□□□ -0.06
SFXN3-207ENST00000489434 TFRCP02786 760 aaKnown RBP14.66□□□□□ -0.06
SFXN3-207ENST00000489434 INHAP05111 366 aa14.66□□□□□ -0.06
SFXN3-207ENST00000489434 TRIM27P14373 513 aa14.66□□□□□ -0.06
SFXN3-207ENST00000489434 ELNP15502 786 aa14.66□□□□□ -0.06
SFXN3-207ENST00000489434 FAM110CQ1W6H9 321 aa14.66□□□□□ -0.06
SFXN3-207ENST00000489434 PI16Q6UXB8 463 aa14.66□□□□□ -0.06
SFXN3-207ENST00000489434 ATF7IPQ6VMQ6 1270 aa14.66□□□□□ -0.06
SFXN3-207ENST00000489434 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
SFXN3-207ENST00000489434 AS3MTQ9HBK9 375 aa14.66□□□□□ -0.06
SFXN3-207ENST00000489434 HERC5Q9UII4 1024 aaKnown RBP14.66□□□□□ -0.06
SFXN3-207ENST00000489434 RANBP2P49792 3224 aaKnown RBP14.66□□□□□ -0.06
SFXN3-207ENST00000489434 DOCK3Q8IZD9 2030 aa14.65□□□□□ -0.06
SFXN3-207ENST00000489434 FAM196BA6NMK8 535 aa14.65□□□□□ -0.06
SFXN3-207ENST00000489434 USP17L5A8MUK1 530 aa14.65□□□□□ -0.06
SFXN3-207ENST00000489434 SLURP2P0DP57 97 aa14.65□□□□□ -0.06
SFXN3-207ENST00000489434 CAP2P40123 477 aa14.65□□□□□ -0.06
SFXN3-207ENST00000489434 OS9Q13438 667 aaPredicted RBP14.65□□□□□ -0.06
SFXN3-207ENST00000489434 CCDC158Q5M9N0 1113 aa14.65□□□□□ -0.06
SFXN3-207ENST00000489434 TREML2Q5T2D2 321 aa14.65□□□□□ -0.06
SFXN3-207ENST00000489434 NAA16Q6N069 864 aaPredicted RBP14.65□□□□□ -0.06
SFXN3-207ENST00000489434 UBE2Q1Q7Z7E8 422 aa14.65□□□□□ -0.06
SFXN3-207ENST00000489434 CCDC84Q86UT8 332 aaPredicted RBP14.65□□□□□ -0.06
SFXN3-207ENST00000489434 ZNF384Q8TF68 577 aa14.65□□□□□ -0.06
SFXN3-207ENST00000489434 TRIM34Q9BYJ4 488 aa14.65□□□□□ -0.06
SFXN3-207ENST00000489434 DHX36Q9H2U1 1008 aaKnown RBP14.65□□□□□ -0.06
SFXN3-207ENST00000489434 PI4KBQ9UBF8 816 aa14.65□□□□□ -0.06
SFXN3-207ENST00000489434 MCAMP43121 646 aa14.64□□□□□ -0.07
SFXN3-207ENST00000489434 HMGCS2P54868 508 aa14.64□□□□□ -0.07
SFXN3-207ENST00000489434 TTC39AQ5SRH9 613 aa14.64□□□□□ -0.07
SFXN3-207ENST00000489434 DEFB118Q96PH6 123 aa14.64□□□□□ -0.07
SFXN3-207ENST00000489434 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.64□□□□□ -0.07
SFXN3-207ENST00000489434 PNMA6EA0A0J9YXQ4 647 aa14.63□□□□□ -0.07
SFXN3-207ENST00000489434 EVI5O60447 810 aa14.63□□□□□ -0.07
SFXN3-207ENST00000489434 ASNSP08243 561 aa14.63□□□□□ -0.07
SFXN3-207ENST00000489434 CRACR2BQ8N4Y2 399 aaPredicted RBP14.63□□□□□ -0.07
SFXN3-207ENST00000489434 SH3RF3Q8TEJ3 882 aaPredicted RBP14.63□□□□□ -0.07
SFXN3-207ENST00000489434 CLUAP1Q96AJ1 413 aa14.63□□□□□ -0.07
SFXN3-207ENST00000489434 GPR108Q9NPR9 543 aa14.63□□□□□ -0.07
SFXN3-207ENST00000489434 TMOD4Q9NZQ9 345 aa14.63□□□□□ -0.07
SFXN3-207ENST00000489434 ATAD5Q96QE3 1844 aa14.63□□□□□ -0.07
SFXN3-207ENST00000489434 IRX3P78415 501 aaPredicted RBP14.62□□□□□ -0.07
SFXN3-207ENST00000489434 ASCC2Q9H1I8 757 aaPredicted RBP14.62□□□□□ -0.07
SFXN3-207ENST00000489434 PAK6Q9NQU5 681 aaPredicted RBP14.62□□□□□ -0.07
SFXN3-207ENST00000489434 SNRKQ9NRH2 765 aa14.62□□□□□ -0.07
SFXN3-207ENST00000489434 AATFQ9NY61 560 aaKnown RBP eCLIP14.62□□□□□ -0.07
SFXN3-207ENST00000489434 RBM27Q9P2N5 1060 aaKnown RBP14.62□□□□□ -0.07
SFXN3-207ENST00000489434 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.62□□□□□ -0.07
SFXN3-207ENST00000489434 LOC285556D6RIA3 1793 aa14.61□□□□□ -0.07
SFXN3-207ENST00000489434 ZBTB7BO15156 539 aaPredicted RBP14.61□□□□□ -0.07
SFXN3-207ENST00000489434 IGSF3O75054 1194 aa14.61□□□□□ -0.07
SFXN3-207ENST00000489434 BCAR3O75815 825 aa14.61□□□□□ -0.07
SFXN3-207ENST00000489434 HMGCRP04035 888 aa14.61□□□□□ -0.07
SFXN3-207ENST00000489434 SH3D19Q5HYK7 790 aa14.61□□□□□ -0.07
SFXN3-207ENST00000489434 ZKSCAN2Q63HK3 967 aa14.61□□□□□ -0.07
SFXN3-207ENST00000489434 FOXP4Q8IVH2 680 aaPredicted RBP14.61□□□□□ -0.07
SFXN3-207ENST00000489434 WDR18Q9BV38 432 aa14.61□□□□□ -0.07
SFXN3-207ENST00000489434 GINM1Q9NU53 330 aa14.61□□□□□ -0.07
SFXN3-207ENST00000489434 C19orf81C9J6K1 198 aa14.6□□□□□ -0.07
SFXN3-207ENST00000489434 SURF6O75683 361 aaKnown RBP14.6□□□□□ -0.07
SFXN3-207ENST00000489434 BACE1P56817 501 aa14.6□□□□□ -0.07
SFXN3-207ENST00000489434 PPP4CP60510 307 aa14.6□□□□□ -0.07
SFXN3-207ENST00000489434 MTMR2Q13614 643 aa14.6□□□□□ -0.07
SFXN3-207ENST00000489434 TNNI3KQ59H18 835 aa14.6□□□□□ -0.07
SFXN3-207ENST00000489434 NECAB2Q7Z6G3 386 aa14.6□□□□□ -0.07
SFXN3-207ENST00000489434 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
SFXN3-207ENST00000489434 TGFBRAP1Q8WUH2 860 aa14.6□□□□□ -0.07
SFXN3-207ENST00000489434 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.6□□□□□ -0.07
SFXN3-207ENST00000489434 FPGT-TNNI3KV9GXZ4 949 aa14.6□□□□□ -0.07
SFXN3-207ENST00000489434 HLA-DOAP06340 250 aa14.59□□□□□ -0.07
SFXN3-207ENST00000489434 CERS3Q8IU89 383 aa14.59□□□□□ -0.07
SFXN3-207ENST00000489434 MAPKAPK5Q8IW41 473 aa14.59□□□□□ -0.07
SFXN3-207ENST00000489434 FTSJ3Q8IY81 847 aaKnown RBP14.59□□□□□ -0.07
SFXN3-207ENST00000489434 TMEM57Q8N5G2 664 aa14.59□□□□□ -0.07
SFXN3-207ENST00000489434 ANKLE1Q8NAG6 615 aa14.59□□□□□ -0.07
SFXN3-207ENST00000489434 ZNF512BQ96KM6 892 aaPredicted RBP14.59□□□□□ -0.07
SFXN3-207ENST00000489434 DBNDD2Q9BQY9 259 aa14.59□□□□□ -0.07
SFXN3-207ENST00000489434 CRISPLD2Q9H0B8 497 aa14.59□□□□□ -0.07
SFXN3-207ENST00000489434 HMX1Q9NP08 348 aaPredicted RBP14.59□□□□□ -0.07
SFXN3-207ENST00000489434 MORF4L1Q9UBU8 362 aa14.59□□□□□ -0.07
SFXN3-207ENST00000489434 MAST2Q6P0Q8 1798 aa14.59□□□□□ -0.07
SFXN3-207ENST00000489434 A0A1W2PPC1 479 aa14.58□□□□□ -0.08
SFXN3-207ENST00000489434 USP17L10C9JJH3 530 aa14.58□□□□□ -0.08
SFXN3-207ENST00000489434 HOXA7P31268 230 aaPredicted RBP14.58□□□□□ -0.08
SFXN3-207ENST00000489434 ATP8B2P98198 1209 aa14.58□□□□□ -0.08
SFXN3-207ENST00000489434 POLA2Q14181 598 aa14.58□□□□□ -0.08
SFXN3-207ENST00000489434 PDE3AQ14432 1141 aa14.58□□□□□ -0.08
SFXN3-207ENST00000489434 RRP1BQ14684 758 aaKnown RBP14.58□□□□□ -0.08
SFXN3-207ENST00000489434 GPRC5AQ8NFJ5 357 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms