RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 SEC31AO94979 1220 aaKnown RBP12.56□□□□□ -0.4
NEB-215ENST00000489048 ERCC5P28715 1186 aaPredicted RBP12.56□□□□□ -0.4
NEB-215ENST00000489048 ARID4AP29374 1257 aaPredicted RBP12.56□□□□□ -0.4
NEB-215ENST00000489048 TOB1P50616 345 aaPredicted RBP12.56□□□□□ -0.4
NEB-215ENST00000489048 SLC9C2Q5TAH2 1124 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 KANK3Q6NY19 840 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 LRP5O75197 1615 aa12.56□□□□□ -0.4
NEB-215ENST00000489048 ARAP2Q8WZ64 1704 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 RXRAP19793 462 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 RILPL1Q5EBL4 403 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 TAF7LQ5H9L4 462 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 GOLGA1Q92805 767 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 MTA3Q9BTC8 594 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 NAA15Q9BXJ9 866 aaKnown RBP12.55□□□□□ -0.4
NEB-215ENST00000489048 PIH1D3Q9NQM4 214 aaKnown RBP12.55□□□□□ -0.4
NEB-215ENST00000489048 TBC1D2BQ9UPU7 963 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 SHANK3Q9BYB0 1731 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 ERICH4A6NGS2 130 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 ACTN4O43707 911 aaKnown RBP12.55□□□□□ -0.4
NEB-215ENST00000489048 PLCD1P51178 756 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 RCAN1P53805 252 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 TMEM67Q5HYA8 995 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 TXLNBQ8N3L3 684 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 ZCRB1Q8TBF4 217 aaKnown RBP12.55□□□□□ -0.4
NEB-215ENST00000489048 SMARCE1Q969G3 411 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 MED15Q96RN5 788 aa12.55□□□□□ -0.4
NEB-215ENST00000489048 STRBPQ96SI9 672 aaKnown RBP12.55□□□□□ -0.4
NEB-215ENST00000489048 PRR29P0C7W0 189 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 PDE6AP16499 860 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 CHRNA2Q15822 529 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 MUM1L1Q5H9M0 696 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 METTL24Q5JXM2 366 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 MSL3Q8N5Y2 521 aaKnown RBP12.54□□□□□ -0.4
NEB-215ENST00000489048 ARFGAP3Q9NP61 516 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 SERTAD1Q9UHV2 236 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 SRPRBQ9Y5M8 271 aaKnown RBP12.54□□□□□ -0.4
NEB-215ENST00000489048 ZNF532Q9HCE3 1301 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 TXLNAP40222 546 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 TUBB2AQ13885 445 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 BRD3Q15059 726 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 SAFBQ15424 915 aaKnown RBP eCLIP12.54□□□□□ -0.4
NEB-215ENST00000489048 NFXL1Q6ZNB6 911 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 APTXQ7Z2E3 356 aaKnown RBP12.54□□□□□ -0.4
NEB-215ENST00000489048 TUBB2BQ9BVA1 445 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 SLC26A6Q9BXS9 759 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 FUT8Q9BYC5 575 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 PARD6BQ9BYG5 372 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 CNNM2Q9H8M5 875 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 SLC12A7Q9Y666 1083 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 DOCK2Q92608 1830 aa12.54□□□□□ -0.4
NEB-215ENST00000489048 CCDC151A5D8V7 595 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 FECHP22830 423 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 OAS2P29728 719 aaKnown RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 PBX1P40424 430 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 ADKP55263 362 aaKnown RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 SLC20A2Q08357 652 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 SMC1AQ14683 1233 aaKnown RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 DIS3L2Q8IYB7 885 aaKnown RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 HNRNPLLQ8WVV9 542 aaKnown RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 DHX58Q96C10 678 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 PSD3Q9NYI0 1048 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 COL22A1Q8NFW1 1626 aaPredicted RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 CHD4Q14839 1912 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 PATL2C9JE40 543 aaKnown RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 AKR1B15C9JRZ8 316 aaPredicted RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 MAP2K7O14733 419 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 SEMA3EO15041 775 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 POLR2DO15514 142 aaKnown RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 UQCRFS1P1P0C7P4 283 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 CDK11BP21127 795 aaKnown RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 TUBB4BP68371 445 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 GRIN1Q05586 938 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 PTPN21Q16825 1174 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 PDILTQ8N807 584 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 BCL9LQ86UU0 1499 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 BTBD18B2RXH4 712 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 CCDC175P0C221 793 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 HNRNPH2P55795 449 aaKnown RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 IRX5P78411 483 aaPredicted RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 TTLL11Q8NHH1 800 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 FAM89AQ96GI7 184 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 KRT23Q9C075 422 aa12.53□□□□□ -0.4
NEB-215ENST00000489048 EPB41L4AQ9HCS5 686 aaPredicted RBP12.53□□□□□ -0.4
NEB-215ENST00000489048 MYO5AQ9Y4I1 1855 aaKnown RBP12.52□□□□□ -0.4
NEB-215ENST00000489048 ZBTB22O15209 634 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 TEX13AQ9BXU3 409 aaPredicted RBP12.52□□□□□ -0.41
NEB-215ENST00000489048 EPC1Q9H2F5 836 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 MRPL44Q9H9J2 332 aaKnown RBP12.52□□□□□ -0.41
NEB-215ENST00000489048 TMEM51Q9NW97 253 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 ZSWIM5Q9P217 1185 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 WWC3Q9ULE0 1092 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 SPATA31A3Q5VYP0 1347 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 UBE2Q2LH0YL09 131 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 POTEB2H3BUK9 544 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 IFIT3O14879 490 aaKnown RBP12.52□□□□□ -0.41
NEB-215ENST00000489048 DEXIO95424 95 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 APPP05067 770 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 ITGA6P23229 1130 aa12.52□□□□□ -0.41
NEB-215ENST00000489048 GUCY1A2P33402 732 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms