RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 LRRC37AA6NMS7 1700 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 TYRO3Q06418 890 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 TRIM29Q14134 588 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 CAMK4Q16566 473 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 KRT40Q6A162 431 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 CTR9Q6PD62 1173 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 PRDX5P30044 214 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 ME1P48163 572 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 NT5C2P49902 561 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 SBK1Q52WX2 424 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 CCDC144CPQ8IYA2 1237 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 PHKBQ93100 1093 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 MYL10Q9BUA6 226 aa17.21■□□□□ 0.35
EPHA1-205ENST00000488068 CCDC94Q9BW85 323 aaPredicted RBP17.21■□□□□ 0.35
EPHA1-205ENST00000488068 KIF28PB7ZC32 967 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 FAM160A1Q05DH4 1040 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 ZNF654Q8IZM8 581 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 ARPP21Q9UBL0 812 aaPredicted RBP17.2■□□□□ 0.34
EPHA1-205ENST00000488068 MRVI1Q9Y6F6 885 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 ORC4O43929 436 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 POLR3DP05423 398 aaPredicted RBP17.2■□□□□ 0.34
EPHA1-205ENST00000488068 STK38Q15208 465 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 TRIM22Q8IYM9 498 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 ENGASEQ8NFI3 743 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 FAM200AQ8TCP9 573 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 ZKSCAN3Q9BRR0 538 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 PCDHA7Q9UN72 937 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 TNKSO95271 1327 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 CAVIN2O95810 425 aa17.2■□□□□ 0.34
EPHA1-205ENST00000488068 U2AF2P26368 475 aaKnown RBP eCLIP17.2■□□□□ 0.34
EPHA1-205ENST00000488068 DZIP1Q86YF9 867 aaKnown RBP17.2■□□□□ 0.34
EPHA1-205ENST00000488068 ZSCAN10Q96SZ4 725 aaPredicted RBP17.2■□□□□ 0.34
EPHA1-205ENST00000488068 DCP1AQ9NPI6 582 aaPredicted RBP17.2■□□□□ 0.34
EPHA1-205ENST00000488068 AATFQ9NY61 560 aaKnown RBP eCLIP17.2■□□□□ 0.34
EPHA1-205ENST00000488068 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
EPHA1-205ENST00000488068 SLC3A2P08195 630 aaKnown RBP17.19■□□□□ 0.34
EPHA1-205ENST00000488068 ATP2B4P23634 1241 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 GSTO1P78417 241 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 SNW1Q13573 536 aaKnown RBP17.19■□□□□ 0.34
EPHA1-205ENST00000488068 SLC26A6Q9BXS9 759 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 GOLPH3LQ9H4A5 285 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 GJB4Q9NTQ9 266 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 CLIC4Q9Y696 253 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 BBOX1O75936 387 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 TRIM37O94972 964 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 HOXA10P31260 410 aaPredicted RBP17.19■□□□□ 0.34
EPHA1-205ENST00000488068 ANO1Q5XXA6 986 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 IQCA1Q86XH1 822 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 FANCBQ8NB91 859 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 PIBF1Q8WXW3 757 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 MRPS27Q92552 414 aaKnown RBP17.19■□□□□ 0.34
EPHA1-205ENST00000488068 AIFM3Q96NN9 605 aa17.19■□□□□ 0.34
EPHA1-205ENST00000488068 USP17L12C9JPN9 530 aa17.18■□□□□ 0.34
EPHA1-205ENST00000488068 USP17L21D6R901 530 aa17.18■□□□□ 0.34
EPHA1-205ENST00000488068 SPTLC2O15270 562 aa17.18■□□□□ 0.34
EPHA1-205ENST00000488068 DEXIO95424 95 aa17.18■□□□□ 0.34
EPHA1-205ENST00000488068 LDHBP07195 334 aaKnown RBP17.18■□□□□ 0.34
EPHA1-205ENST00000488068 NBPF11Q86T75 865 aa17.18■□□□□ 0.34
EPHA1-205ENST00000488068 CKAP2LQ8IYA6 745 aa17.18■□□□□ 0.34
EPHA1-205ENST00000488068 NRXN2Q9P2S2 1712 aa17.18■□□□□ 0.34
EPHA1-205ENST00000488068 KLRG2A4D1S0 409 aaPredicted RBP17.18■□□□□ 0.34
EPHA1-205ENST00000488068 SF3A1Q15459 793 aaKnown RBP17.18■□□□□ 0.34
EPHA1-205ENST00000488068 DNTTIP2Q5QJE6 756 aaKnown RBP17.18■□□□□ 0.34
EPHA1-205ENST00000488068 FSIP1Q8NA03 581 aa17.18■□□□□ 0.34
EPHA1-205ENST00000488068 PRIMPOLQ96LW4 560 aa17.18■□□□□ 0.34
EPHA1-205ENST00000488068 CRAMP1Q96RY5 1269 aa17.18■□□□□ 0.34
EPHA1-205ENST00000488068 PRDM10Q9NQV6 1147 aa17.18■□□□□ 0.34
EPHA1-205ENST00000488068 LTBP1Q14766 1721 aa17.18■□□□□ 0.34
EPHA1-205ENST00000488068 KINO60870 393 aaKnown RBP17.17■□□□□ 0.34
EPHA1-205ENST00000488068 GPSM2P81274 684 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 TMC4Q7Z404 712 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 CERS3Q8IU89 383 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 STK11IPQ8N1F8 1099 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 CRACR2BQ8N4Y2 399 aaPredicted RBP17.17■□□□□ 0.34
EPHA1-205ENST00000488068 ENAHQ8N8S7 591 aaPredicted RBP17.17■□□□□ 0.34
EPHA1-205ENST00000488068 PODXL2Q9NZ53 605 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 NAV1Q8NEY1 1877 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 POLRMTO00411 1230 aaKnown RBP17.17■□□□□ 0.34
EPHA1-205ENST00000488068 CALM1P0DP23 149 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 CALM2P0DP24 149 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 CALM3P0DP25 149 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 USP25Q9UHP3 1055 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 CYP2D7A0A087X1C5 515 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 GNL2Q13823 731 aaKnown RBP17.17■□□□□ 0.34
EPHA1-205ENST00000488068 SLC39A14Q15043 492 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 TXNRD1Q16881 649 aa17.17■□□□□ 0.34
EPHA1-205ENST00000488068 IFIT1BQ5T764 474 aaKnown RBP17.16■□□□□ 0.34
EPHA1-205ENST00000488068 ZNF710Q8N1W2 664 aa17.16■□□□□ 0.34
EPHA1-205ENST00000488068 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.16■□□□□ 0.34
EPHA1-205ENST00000488068 RNF26Q9BY78 433 aaPredicted RBP17.16■□□□□ 0.34
EPHA1-205ENST00000488068 RBM28Q9NW13 759 aaKnown RBP17.16■□□□□ 0.34
EPHA1-205ENST00000488068 GGA1Q9UJY5 639 aa17.16■□□□□ 0.34
EPHA1-205ENST00000488068 PPP6R2O75170 966 aa17.16■□□□□ 0.34
EPHA1-205ENST00000488068 DDAH1O94760 285 aa17.16■□□□□ 0.34
EPHA1-205ENST00000488068 LDHCP07864 332 aa17.16■□□□□ 0.34
EPHA1-205ENST00000488068 IL1R1P14778 569 aa17.16■□□□□ 0.34
EPHA1-205ENST00000488068 GTF2F1P35269 517 aaKnown RBP eCLIP17.16■□□□□ 0.34
EPHA1-205ENST00000488068 DDR1Q08345 913 aa17.16■□□□□ 0.34
EPHA1-205ENST00000488068 CATIPQ7Z7H3 387 aa17.16■□□□□ 0.34
EPHA1-205ENST00000488068 FMR1NBQ8N0W7 255 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms