RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PAK6Q9NQU5 681 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-214ENST00000483925 DDX41Q9UJV9 622 aaKnown RBP6.2□□□□□ -1.42
PTCD3-214ENST00000483925 AP4E1Q9UPM8 1137 aa6.2□□□□□ -1.42
PTCD3-214ENST00000483925 ECEL1O95672 775 aa6.19□□□□□ -1.42
PTCD3-214ENST00000483925 ITGB5P18084 799 aa6.19□□□□□ -1.42
PTCD3-214ENST00000483925 ENOX2Q16206 610 aaKnown RBP6.19□□□□□ -1.42
PTCD3-214ENST00000483925 OGFOD3Q6PK18 319 aa6.19□□□□□ -1.42
PTCD3-214ENST00000483925 SEZ6L2Q6UXD5 910 aa6.19□□□□□ -1.42
PTCD3-214ENST00000483925 FBF1Q8TES7 1133 aa6.19□□□□□ -1.42
PTCD3-214ENST00000483925 ZNF576Q9H609 170 aa6.19□□□□□ -1.42
PTCD3-214ENST00000483925 C1GALT1Q9NS00 363 aa6.19□□□□□ -1.42
PTCD3-214ENST00000483925 WWC3Q9ULE0 1092 aa6.19□□□□□ -1.42
PTCD3-214ENST00000483925 AOC2O75106 756 aa6.18□□□□□ -1.42
PTCD3-214ENST00000483925 ITPKAP23677 461 aa6.18□□□□□ -1.42
PTCD3-214ENST00000483925 PDE3AQ14432 1141 aa6.18□□□□□ -1.42
PTCD3-214ENST00000483925 BMS1Q14692 1282 aaKnown RBP6.18□□□□□ -1.42
PTCD3-214ENST00000483925 USPL1Q5W0Q7 1092 aa6.18□□□□□ -1.42
PTCD3-214ENST00000483925 USP48Q86UV5 1035 aa6.18□□□□□ -1.42
PTCD3-214ENST00000483925 FAM9AQ8IZU1 332 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-214ENST00000483925 EHD4Q9H223 541 aa6.18□□□□□ -1.42
PTCD3-214ENST00000483925 MYH16Q9H6N6 1097 aa6.18□□□□□ -1.42
PTCD3-214ENST00000483925 RNF19AQ9NV58 838 aa6.18□□□□□ -1.42
PTCD3-214ENST00000483925 SLC5A6Q9Y289 635 aa6.18□□□□□ -1.42
PTCD3-214ENST00000483925 DAGLAQ9Y4D2 1042 aa6.18□□□□□ -1.42
PTCD3-214ENST00000483925 AK5Q9Y6K8 562 aa6.18□□□□□ -1.42
PTCD3-214ENST00000483925 SYNGAP1Q96PV0 1343 aa6.18□□□□□ -1.42
PTCD3-214ENST00000483925 PNMA6FA0A0J9YX94 578 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 GPR182O15218 404 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 DYNC1LI2O43237 492 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-214ENST00000483925 IGHA2P01877 340 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 AP3B2Q13367 1082 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 CYP27C1Q4G0S4 372 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 NBPF6Q5VWK0 638 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 HS2ST1Q7LGA3 356 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 CKAP2LQ8IYA6 745 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 POU5F2Q8N7G0 328 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 NBPF4Q96M43 638 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.17□□□□□ -1.422e-9■□□□□ 11.3
PTCD3-214ENST00000483925 WDR18Q9BV38 432 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 NIF3L1Q9GZT8 377 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 TMX1Q9H3N1 280 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 RIPOR2Q9Y4F9 1068 aa6.17□□□□□ -1.42
PTCD3-214ENST00000483925 CPNE3O75131 537 aaKnown RBP6.16□□□□□ -1.42
PTCD3-214ENST00000483925 XRCC5P13010 732 aaKnown RBP6.16□□□□□ -1.42
PTCD3-214ENST00000483925 PTPN12Q05209 780 aaKnown RBP6.16□□□□□ -1.42
PTCD3-214ENST00000483925 JAZF1Q86VZ6 243 aa6.16□□□□□ -1.42
PTCD3-214ENST00000483925 MCF2L2Q86YR7 1114 aa6.16□□□□□ -1.42
PTCD3-214ENST00000483925 STK11IPQ8N1F8 1099 aa6.16□□□□□ -1.42
PTCD3-214ENST00000483925 BCL7CQ8WUZ0 217 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-214ENST00000483925 LGR6Q9HBX8 967 aa6.16□□□□□ -1.42
PTCD3-214ENST00000483925 PPP1R9AQ9ULJ8 1098 aa6.16□□□□□ -1.42
PTCD3-214ENST00000483925 SPG7Q9UQ90 795 aa6.16□□□□□ -1.42
PTCD3-214ENST00000483925 LOC102724159A0A0B4J2E5 919 aa6.15□□□□□ -1.42
PTCD3-214ENST00000483925 FGRP09769 529 aa6.15□□□□□ -1.42
PTCD3-214ENST00000483925 RACK1P63244 317 aaKnown RBP6.15□□□□□ -1.42
PTCD3-214ENST00000483925 PWP2Q15269 919 aaKnown RBP6.15□□□□□ -1.42
PTCD3-214ENST00000483925 ZNF394Q53GI3 561 aa6.15□□□□□ -1.42
PTCD3-214ENST00000483925 HSP90AB2PQ58FF8 381 aa6.15□□□□□ -1.42
PTCD3-214ENST00000483925 MKL1Q969V6 931 aa6.15□□□□□ -1.42
PTCD3-214ENST00000483925 NPHS2Q9NP85 383 aa6.15□□□□□ -1.42
PTCD3-214ENST00000483925 SUGT1Q9Y2Z0 365 aa6.15□□□□□ -1.42
PTCD3-214ENST00000483925 TPD52L2O43399 206 aaKnown RBP6.14□□□□□ -1.43
PTCD3-214ENST00000483925 C8AP07357 584 aa6.14□□□□□ -1.43
PTCD3-214ENST00000483925 SLFN14P0C7P3 912 aa6.14□□□□□ -1.43
PTCD3-214ENST00000483925 ATF4P18848 351 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-214ENST00000483925 EIF4BP23588 611 aaKnown RBP6.14□□□□□ -1.43
PTCD3-214ENST00000483925 GJA8P48165 433 aa6.14□□□□□ -1.43
PTCD3-214ENST00000483925 ORC1Q13415 861 aa6.14□□□□□ -1.43
PTCD3-214ENST00000483925 PLCL1Q15111 1095 aa6.14□□□□□ -1.43
PTCD3-214ENST00000483925 RPS26P11Q5JNZ5 115 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-214ENST00000483925 GORABQ5T7V8 394 aa6.14□□□□□ -1.43
PTCD3-214ENST00000483925 MISP3Q96FF7 219 aa6.14□□□□□ -1.43
PTCD3-214ENST00000483925 KLHL42Q9P2K6 505 aa6.14□□□□□ -1.43
PTCD3-214ENST00000483925 PCDHGB7Q9Y5F8 929 aa6.14□□□□□ -1.43
PTCD3-214ENST00000483925 COL4A3BPQ9Y5P4 624 aa6.14□□□□□ -1.43
PTCD3-214ENST00000483925 MRPL42Q9Y6G3 142 aaKnown RBP6.14□□□□□ -1.43
PTCD3-214ENST00000483925 BIN1O00499 593 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 ENPP3O14638 875 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 PPP1R12AO14974 1030 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-214ENST00000483925 LIG1P18858 919 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 JAG1P78504 1218 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 SPRED2Q7Z698 418 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 CCDC74AQ96AQ1 378 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 SETDB2Q96T68 719 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 ATXN3LQ9H3M9 355 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 PIDD1Q9HB75 910 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 ABCB6Q9NP58 842 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 IFT57Q9NWB7 429 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 CRIM1Q9NZV1 1036 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 MAGEC2Q9UBF1 373 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-214ENST00000483925 GGT7Q9UJ14 662 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 PRKAB1Q9Y478 270 aa6.13□□□□□ -1.43
PTCD3-214ENST00000483925 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
PTCD3-214ENST00000483925 GIPC1O14908 333 aa6.12□□□□□ -1.43
PTCD3-214ENST00000483925 TMPRSS2O15393 492 aa6.12□□□□□ -1.43
PTCD3-214ENST00000483925 DNAJC6O75061 913 aa6.12□□□□□ -1.43
PTCD3-214ENST00000483925 PAPLNO95428 1278 aa6.12□□□□□ -1.43
PTCD3-214ENST00000483925 CTSHP09668 335 aa6.12□□□□□ -1.43
PTCD3-214ENST00000483925 HNRNPUQ00839 825 aaKnown RBP eCLIP6.12□□□□□ -1.43
PTCD3-214ENST00000483925 ZNF792Q3KQV3 632 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms