RNA–Protein interactions for RNA: ENST00000482243.1

TRAIP-207, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-207ENST00000482243 ZNF274Q96GC6 653 aaPredicted RBP16.52■□□□□ 0.24
TRAIP-207ENST00000482243 ANGEL1Q9UNK9 670 aaKnown RBP16.52■□□□□ 0.24
TRAIP-207ENST00000482243 SMC3Q9UQE7 1217 aa16.52■□□□□ 0.24
TRAIP-207ENST00000482243 PCDHAC2Q9Y5I4 1007 aa16.52■□□□□ 0.24
TRAIP-207ENST00000482243 KLF18A0A0U1RQI7 1052 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 PFKFB2O60825 505 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 PLCD1P51178 756 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 DLGAP5Q15398 846 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 NFXL1Q6ZNB6 911 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 TTC6Q86TZ1 520 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 IGDCC4Q8TDY8 1250 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 DYNLL2Q96FJ2 89 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 UBAC1Q9BSL1 405 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 MTA3Q9BTC8 594 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 MKNK2Q9HBH9 465 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 ZNF287Q9HBT7 754 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 ROBO3Q96MS0 1386 aa16.51■□□□□ 0.23
TRAIP-207ENST00000482243 PDIA3P30101 505 aaKnown RBP16.5■□□□□ 0.23
TRAIP-207ENST00000482243 NT5C2P49902 561 aa16.5■□□□□ 0.23
TRAIP-207ENST00000482243 EVCP57679 992 aa16.5■□□□□ 0.23
TRAIP-207ENST00000482243 GTF3C6Q969F1 213 aa16.5■□□□□ 0.23
TRAIP-207ENST00000482243 ZKSCAN3Q9BRR0 538 aa16.5■□□□□ 0.23
TRAIP-207ENST00000482243 DDX4Q9NQI0 724 aaKnown RBP16.5■□□□□ 0.23
TRAIP-207ENST00000482243 DDX60LQ5H9U9 1706 aaKnown RBP16.5■□□□□ 0.23
TRAIP-207ENST00000482243 LIFRP42702 1097 aa16.49■□□□□ 0.23
TRAIP-207ENST00000482243 PRELPP51888 382 aa16.49■□□□□ 0.23
TRAIP-207ENST00000482243 NUCB2P80303 420 aa16.49■□□□□ 0.23
TRAIP-207ENST00000482243 ST3GAL1Q11201 340 aa16.49■□□□□ 0.23
TRAIP-207ENST00000482243 WTAPQ15007 396 aa16.49■□□□□ 0.23
TRAIP-207ENST00000482243 IQCA1Q86XH1 822 aa16.49■□□□□ 0.23
TRAIP-207ENST00000482243 ZNF444Q8N0Y2 327 aaPredicted RBP16.49■□□□□ 0.23
TRAIP-207ENST00000482243 TMTC2Q8N394 836 aa16.49■□□□□ 0.23
TRAIP-207ENST00000482243 PRMT6Q96LA8 375 aaPredicted RBP16.49■□□□□ 0.23
TRAIP-207ENST00000482243 IDI2Q9BXS1 227 aa16.49■□□□□ 0.23
TRAIP-207ENST00000482243 OSBPL5Q9H0X9 879 aaPredicted RBP16.49■□□□□ 0.23
TRAIP-207ENST00000482243 TDRD3Q9H7E2 651 aaKnown RBP16.49■□□□□ 0.23
TRAIP-207ENST00000482243 LY9Q9HBG7 655 aa16.49■□□□□ 0.23
TRAIP-207ENST00000482243 TMOD2Q9NZR1 351 aa16.49■□□□□ 0.23
TRAIP-207ENST00000482243 BRPF3Q9ULD4 1205 aa16.49■□□□□ 0.23
TRAIP-207ENST00000482243 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
TRAIP-207ENST00000482243 TSPY2A6NKD2 308 aa16.48■□□□□ 0.23
TRAIP-207ENST00000482243 GOLGA8BA8MQT2 603 aa16.48■□□□□ 0.23
TRAIP-207ENST00000482243 FZD9O00144 591 aa16.48■□□□□ 0.23
TRAIP-207ENST00000482243 HLA-DOAP06340 250 aa16.48■□□□□ 0.23
TRAIP-207ENST00000482243 LMNB1P20700 586 aa16.48■□□□□ 0.23
TRAIP-207ENST00000482243 RPS12P25398 132 aaKnown RBP16.48■□□□□ 0.23
TRAIP-207ENST00000482243 MMP14P50281 582 aa16.48■□□□□ 0.23
TRAIP-207ENST00000482243 CCT2P78371 535 aaKnown RBP16.48■□□□□ 0.23
TRAIP-207ENST00000482243 SCRN1Q12765 414 aa16.48■□□□□ 0.23
TRAIP-207ENST00000482243 NFIAQ12857 509 aa16.48■□□□□ 0.23
TRAIP-207ENST00000482243 SYNE3Q6ZMZ3 975 aa16.48■□□□□ 0.23
TRAIP-207ENST00000482243 C16orf86Q6ZW13 317 aa16.48■□□□□ 0.23
TRAIP-207ENST00000482243 ZSCAN10Q96SZ4 725 aaPredicted RBP16.48■□□□□ 0.23
TRAIP-207ENST00000482243 GJA3Q9Y6H8 435 aa16.48■□□□□ 0.23
TRAIP-207ENST00000482243 DICER1Q9UPY3 1922 aaKnown RBP16.47■□□□□ 0.23
TRAIP-207ENST00000482243 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
TRAIP-207ENST00000482243 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
TRAIP-207ENST00000482243 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
TRAIP-207ENST00000482243 GJB2P29033 226 aa16.47■□□□□ 0.23
TRAIP-207ENST00000482243 CDK8P49336 464 aa16.47■□□□□ 0.23
TRAIP-207ENST00000482243 CACNB3P54284 484 aa16.47■□□□□ 0.23
TRAIP-207ENST00000482243 TFAP4Q01664 338 aa16.47■□□□□ 0.23
TRAIP-207ENST00000482243 FAM47AQ5JRC9 791 aa16.47■□□□□ 0.23
TRAIP-207ENST00000482243 SGMS1Q86VZ5 419 aa16.47■□□□□ 0.23
TRAIP-207ENST00000482243 MTMR14Q8NCE2 650 aa16.47■□□□□ 0.23
TRAIP-207ENST00000482243 LLPHQ9BRT6 129 aaKnown RBP16.47■□□□□ 0.23
TRAIP-207ENST00000482243 TNKSO95271 1327 aa16.46■□□□□ 0.23
TRAIP-207ENST00000482243 ZBTB43O43298 467 aa16.46■□□□□ 0.23
TRAIP-207ENST00000482243 ENTPD3O75355 529 aa16.46■□□□□ 0.23
TRAIP-207ENST00000482243 TCP10Q12799 353 aa16.46■□□□□ 0.23
TRAIP-207ENST00000482243 CCDC178Q5BJE1 867 aa16.46■□□□□ 0.23
TRAIP-207ENST00000482243 ZSCAN29Q8IWY8 852 aaPredicted RBP16.46■□□□□ 0.23
TRAIP-207ENST00000482243 SLC44A5Q8NCS7 719 aa16.46■□□□□ 0.23
TRAIP-207ENST00000482243 DHX36Q9H2U1 1008 aaKnown RBP16.46■□□□□ 0.23
TRAIP-207ENST00000482243 SENP2Q9HC62 589 aa16.46■□□□□ 0.23
TRAIP-207ENST00000482243 FAM198AQ9UFP1 575 aa16.46■□□□□ 0.23
TRAIP-207ENST00000482243 SLC12A7Q9Y666 1083 aa16.46■□□□□ 0.23
TRAIP-207ENST00000482243 SBF1O95248 1867 aa16.46■□□□□ 0.22
TRAIP-207ENST00000482243 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
TRAIP-207ENST00000482243 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
TRAIP-207ENST00000482243 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
TRAIP-207ENST00000482243 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
TRAIP-207ENST00000482243 RAB3GAP1Q15042 981 aa16.45■□□□□ 0.22
TRAIP-207ENST00000482243 SEC23AQ15436 765 aa16.45■□□□□ 0.22
TRAIP-207ENST00000482243 APOA5Q6Q788 366 aa16.45■□□□□ 0.22
TRAIP-207ENST00000482243 RAB11FIP4Q86YS3 637 aa16.45■□□□□ 0.22
TRAIP-207ENST00000482243 ZFPM1Q8IX07 1006 aa16.45■□□□□ 0.22
TRAIP-207ENST00000482243 DPF2Q92785 391 aa16.45■□□□□ 0.22
TRAIP-207ENST00000482243 NCOA5Q9HCD5 579 aaKnown RBP16.45■□□□□ 0.22
TRAIP-207ENST00000482243 ZNF70Q9UC06 446 aaPredicted RBP16.45■□□□□ 0.22
TRAIP-207ENST00000482243 HPS5Q9UPZ3 1129 aa16.45■□□□□ 0.22
TRAIP-207ENST00000482243 CLRN2A0PK11 232 aa16.44■□□□□ 0.22
TRAIP-207ENST00000482243 MYO1BO43795 1136 aa16.44■□□□□ 0.22
TRAIP-207ENST00000482243 RASA1P20936 1047 aa16.44■□□□□ 0.22
TRAIP-207ENST00000482243 METAP2P50579 478 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAIP-207ENST00000482243 IFIT1BQ5T764 474 aaKnown RBP16.44■□□□□ 0.22
TRAIP-207ENST00000482243 ENAHQ8N8S7 591 aaPredicted RBP16.44■□□□□ 0.22
TRAIP-207ENST00000482243 TRIM34Q9BYJ4 488 aa16.44■□□□□ 0.22
TRAIP-207ENST00000482243 MYOZ2Q9NPC6 264 aa16.44■□□□□ 0.22
TRAIP-207ENST00000482243 SWAP70Q9UH65 585 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms