RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 SPDYE2BA6NHP3 402 aa17.41■□□□□ 0.38
SNRNP200-205ENST00000480835 LARGE1O95461 756 aa17.41■□□□□ 0.38
SNRNP200-205ENST00000480835 SPDYE6P0CI01 402 aa17.41■□□□□ 0.38
SNRNP200-205ENST00000480835 LIFRP42702 1097 aa17.41■□□□□ 0.38
SNRNP200-205ENST00000480835 TMTC2Q8N394 836 aa17.41■□□□□ 0.38
SNRNP200-205ENST00000480835 DPF2Q92785 391 aa17.41■□□□□ 0.38
SNRNP200-205ENST00000480835 LARP6Q9BRS8 491 aaKnown RBP17.41■□□□□ 0.38
SNRNP200-205ENST00000480835 DHX36Q9H2U1 1008 aaKnown RBP17.41■□□□□ 0.38
SNRNP200-205ENST00000480835 INCENPQ9NQS7 918 aa17.41■□□□□ 0.38
SNRNP200-205ENST00000480835 COL2A1P02458 1487 aaPredicted RBP17.41■□□□□ 0.38
SNRNP200-205ENST00000480835 IFIT3O14879 490 aaKnown RBP17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 PFKFB2O60825 505 aa17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 ENTPD3O75355 529 aa17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 HLA-DOAP06340 250 aa17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 ZNF280AP59817 542 aaPredicted RBP17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 APOBRQ0VD83 1088 aa17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 PICALMQ13492 652 aa17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 CCDC178Q5BJE1 867 aa17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 TMEM67Q5HYA8 995 aa17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 C16orf86Q6ZW13 317 aa17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 IQCA1Q86XH1 822 aa17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 IGDCC4Q8TDY8 1250 aa17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 UBAC1Q9BSL1 405 aa17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 DDX4Q9NQI0 724 aaKnown RBP17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 FOXD4L1Q9NU39 408 aa17.4■□□□□ 0.38
SNRNP200-205ENST00000480835 RANBP6O60518 1105 aaKnown RBP17.39■□□□□ 0.37
SNRNP200-205ENST00000480835 PLCD1P51178 756 aa17.39■□□□□ 0.37
SNRNP200-205ENST00000480835 FKBP1CQ5VVH2 108 aa17.39■□□□□ 0.37
SNRNP200-205ENST00000480835 SGMS1Q86VZ5 419 aa17.39■□□□□ 0.37
SNRNP200-205ENST00000480835 CCDC83Q8IWF9 413 aa17.39■□□□□ 0.37
SNRNP200-205ENST00000480835 STK11IPQ8N1F8 1099 aa17.39■□□□□ 0.37
SNRNP200-205ENST00000480835 GTF3C6Q969F1 213 aa17.39■□□□□ 0.37
SNRNP200-205ENST00000480835 PRMT6Q96LA8 375 aaPredicted RBP17.39■□□□□ 0.37
SNRNP200-205ENST00000480835 TDRD3Q9H7E2 651 aaKnown RBP17.39■□□□□ 0.37
SNRNP200-205ENST00000480835 MKNK2Q9HBH9 465 aa17.39■□□□□ 0.37
SNRNP200-205ENST00000480835 SWAP70Q9UH65 585 aa17.39■□□□□ 0.37
SNRNP200-205ENST00000480835 KLF18A0A0U1RQI7 1052 aa17.38■□□□□ 0.37
SNRNP200-205ENST00000480835 SMIM22K7EJ46 135 aa17.38■□□□□ 0.37
SNRNP200-205ENST00000480835 MYO1BO43795 1136 aa17.38■□□□□ 0.37
SNRNP200-205ENST00000480835 WTAPQ15007 396 aa17.38■□□□□ 0.37
SNRNP200-205ENST00000480835 ZNF444Q8N0Y2 327 aaPredicted RBP17.38■□□□□ 0.37
SNRNP200-205ENST00000480835 ZBED3Q96IU2 234 aaPredicted RBP17.38■□□□□ 0.37
SNRNP200-205ENST00000480835 EHD4Q9H223 541 aa17.38■□□□□ 0.37
SNRNP200-205ENST00000480835 LY9Q9HBG7 655 aa17.38■□□□□ 0.37
SNRNP200-205ENST00000480835 FAM198AQ9UFP1 575 aa17.38■□□□□ 0.37
SNRNP200-205ENST00000480835 SMC3Q9UQE7 1217 aa17.38■□□□□ 0.37
SNRNP200-205ENST00000480835 PCDHAC2Q9Y5I4 1007 aa17.38■□□□□ 0.37
SNRNP200-205ENST00000480835 PRDM1O75626 825 aa17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 YBX3P16989 372 aaKnown RBP eCLIP17.37■□□□□ 0.371e-12■□□□□ 10.9
SNRNP200-205ENST00000480835 PDIA3P30101 505 aaKnown RBP17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 CDK8P49336 464 aa17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 GMPSP49915 693 aaPredicted RBP17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 RCAN1P53805 252 aa17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 NFIAQ12857 509 aa17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 SPDYE2Q495Y8 402 aa17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 NECAB1Q8N987 351 aa17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 NKX2-3Q8TAU0 364 aa17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 DYNLL2Q96FJ2 89 aa17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 ZSCAN10Q96SZ4 725 aaPredicted RBP17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 LLPHQ9BRT6 129 aaKnown RBP17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 MYOZ2Q9NPC6 264 aa17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 ZNF70Q9UC06 446 aaPredicted RBP17.37■□□□□ 0.37
SNRNP200-205ENST00000480835 CCDC69A6NI79 296 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 TSPY2A6NKD2 308 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 DHX16O60231 1041 aaKnown RBP17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 PDIA4P13667 645 aaKnown RBP17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 NUCB2P80303 420 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 EVX2Q03828 476 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 GABPAQ06546 454 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 ST3GAL1Q11201 340 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 STK3Q13188 491 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 SEC23AQ15436 765 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 APOA5Q6Q788 366 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 SYNE3Q6ZMZ3 975 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 NFXL1Q6ZNB6 911 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 GPC2Q8N158 579 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 GPHNQ9NQX3 736 aaPredicted RBP17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 TCP11L1Q9NUJ3 509 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 SERPINB13Q9UIV8 391 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 BRPF3Q9ULD4 1205 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 GJA3Q9Y6H8 435 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 TNKSO95271 1327 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 ZNF541Q9H0D2 1346 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 ATRNL1Q5VV63 1379 aa17.36■□□□□ 0.37
SNRNP200-205ENST00000480835 SIPA1L1O43166 1804 aa17.35■□□□□ 0.37
SNRNP200-205ENST00000480835 GOLGA8BA8MQT2 603 aa17.35■□□□□ 0.37
SNRNP200-205ENST00000480835 RASA1P20936 1047 aa17.35■□□□□ 0.37
SNRNP200-205ENST00000480835 SLC4A8Q2Y0W8 1093 aa17.35■□□□□ 0.37
SNRNP200-205ENST00000480835 FOXP4Q8IVH2 680 aaPredicted RBP17.35■□□□□ 0.37
SNRNP200-205ENST00000480835 PI4KBQ9UBF8 816 aa17.35■□□□□ 0.37
SNRNP200-205ENST00000480835 CNOT7Q9UIV1 285 aaKnown RBP17.35■□□□□ 0.37
SNRNP200-205ENST00000480835 NAP1L2Q9ULW6 460 aaPredicted RBP17.35■□□□□ 0.37
SNRNP200-205ENST00000480835 ZBTB43O43298 467 aa17.34■□□□□ 0.37
SNRNP200-205ENST00000480835 CACNB3P54284 484 aa17.34■□□□□ 0.37
SNRNP200-205ENST00000480835 TFAP4Q01664 338 aa17.34■□□□□ 0.37
SNRNP200-205ENST00000480835 SCRN1Q12765 414 aa17.34■□□□□ 0.37
SNRNP200-205ENST00000480835 NID2Q14112 1375 aa17.34■□□□□ 0.37
SNRNP200-205ENST00000480835 FAM83AQ86UY5 434 aa17.34■□□□□ 0.37
SNRNP200-205ENST00000480835 MICALL2Q8IY33 904 aa17.34■□□□□ 0.37
SNRNP200-205ENST00000480835 FAM151AQ8WW52 585 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms