RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 ZNF280CQ8ND82 737 aa16.41■□□□□ 0.22
ABCF1-206ENST00000479542 COA7Q96BR5 231 aa16.41■□□□□ 0.22
ABCF1-206ENST00000479542 DHX36Q9H2U1 1008 aaKnown RBP16.41■□□□□ 0.22
ABCF1-206ENST00000479542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.41■□□□□ 0.22
ABCF1-206ENST00000479542 GPR108Q9NPR9 543 aa16.41■□□□□ 0.22
ABCF1-206ENST00000479542 CCER2I3L3R5 266 aa16.4■□□□□ 0.22
ABCF1-206ENST00000479542 PPP4CP60510 307 aa16.4■□□□□ 0.22
ABCF1-206ENST00000479542 PICALMQ13492 652 aa16.4■□□□□ 0.22
ABCF1-206ENST00000479542 UNC93B1Q9H1C4 597 aa16.4■□□□□ 0.22
ABCF1-206ENST00000479542 PI4KBQ9UBF8 816 aa16.4■□□□□ 0.22
ABCF1-206ENST00000479542 TRIOBPQ9H2D6 2365 aa16.4■□□□□ 0.22
ABCF1-206ENST00000479542 RANBP2P49792 3224 aaKnown RBP16.4■□□□□ 0.22
ABCF1-206ENST00000479542 TRIM75PA6NK02 468 aa16.39■□□□□ 0.21
ABCF1-206ENST00000479542 USP17L5A8MUK1 530 aa16.39■□□□□ 0.21
ABCF1-206ENST00000479542 FARP2O94887 1054 aaPredicted RBP16.39■□□□□ 0.21
ABCF1-206ENST00000479542 GNAI2P04899 355 aa16.39■□□□□ 0.21
ABCF1-206ENST00000479542 ANKLE1Q8NAG6 615 aa16.39■□□□□ 0.21
ABCF1-206ENST00000479542 ZNF512BQ96KM6 892 aaPredicted RBP16.39■□□□□ 0.21
ABCF1-206ENST00000479542 NEUROD6Q96NK8 337 aa16.39■□□□□ 0.21
ABCF1-206ENST00000479542 WDR18Q9BV38 432 aa16.39■□□□□ 0.21
ABCF1-206ENST00000479542 ZBTB7BO15156 539 aaPredicted RBP16.38■□□□□ 0.21
ABCF1-206ENST00000479542 INHAP05111 366 aa16.38■□□□□ 0.21
ABCF1-206ENST00000479542 PLCG2P16885 1265 aa16.38■□□□□ 0.21
ABCF1-206ENST00000479542 HOXA7P31268 230 aaPredicted RBP16.38■□□□□ 0.21
ABCF1-206ENST00000479542 SPP2Q13103 211 aa16.38■□□□□ 0.21
ABCF1-206ENST00000479542 G3BP1Q13283 466 aaKnown RBP eCLIP16.38■□□□□ 0.212e-6■■■□□ 17.1
ABCF1-206ENST00000479542 GORABQ5T7V8 394 aa16.38■□□□□ 0.21
ABCF1-206ENST00000479542 ATF7IPQ6VMQ6 1270 aa16.38■□□□□ 0.21
ABCF1-206ENST00000479542 CHRDL2Q6WN34 429 aa16.38■□□□□ 0.21
ABCF1-206ENST00000479542 FOXP4Q8IVH2 680 aaPredicted RBP16.38■□□□□ 0.21
ABCF1-206ENST00000479542 AS3MTQ9HBK9 375 aa16.38■□□□□ 0.21
ABCF1-206ENST00000479542 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
ABCF1-206ENST00000479542 MORF4L1Q9UBU8 362 aa16.38■□□□□ 0.21
ABCF1-206ENST00000479542 SZT2Q5T011 3432 aa16.37■□□□□ 0.21
ABCF1-206ENST00000479542 BAG3O95817 575 aa16.37■□□□□ 0.21
ABCF1-206ENST00000479542 TRIM27P14373 513 aa16.37■□□□□ 0.21
ABCF1-206ENST00000479542 TREML2Q5T2D2 321 aa16.37■□□□□ 0.21
ABCF1-206ENST00000479542 TMED8Q6PL24 325 aaPredicted RBP16.37■□□□□ 0.21
ABCF1-206ENST00000479542 ANKRD13CQ8N6S4 541 aa16.37■□□□□ 0.21
ABCF1-206ENST00000479542 GJD2Q9UKL4 321 aa16.37■□□□□ 0.21
ABCF1-206ENST00000479542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.37■□□□□ 0.21
ABCF1-206ENST00000479542 DOCK3Q8IZD9 2030 aa16.36■□□□□ 0.21
ABCF1-206ENST00000479542 C19orf81C9J6K1 198 aa16.36■□□□□ 0.21
ABCF1-206ENST00000479542 ASNSP08243 561 aa16.36■□□□□ 0.21
ABCF1-206ENST00000479542 MCAMP43121 646 aa16.36■□□□□ 0.21
ABCF1-206ENST00000479542 LRP2BPQ9P2M1 347 aa16.36■□□□□ 0.21
ABCF1-206ENST00000479542 LOC285556D6RIA3 1793 aa16.36■□□□□ 0.21
ABCF1-206ENST00000479542 ECM2O94769 699 aaPredicted RBP16.35■□□□□ 0.21
ABCF1-206ENST00000479542 TFRCP02786 760 aaKnown RBP16.35■□□□□ 0.21
ABCF1-206ENST00000479542 SLURP2P0DP57 97 aa16.35■□□□□ 0.21
ABCF1-206ENST00000479542 ELNP15502 786 aa16.35■□□□□ 0.21
ABCF1-206ENST00000479542 BACE1P56817 501 aa16.35■□□□□ 0.21
ABCF1-206ENST00000479542 TBC1D9Q6ZT07 1266 aa16.35■□□□□ 0.21
ABCF1-206ENST00000479542 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
ABCF1-206ENST00000479542 TEX11Q8IYF3 940 aa16.35■□□□□ 0.21
ABCF1-206ENST00000479542 NOL10Q9BSC4 688 aaKnown RBP16.35■□□□□ 0.21
ABCF1-206ENST00000479542 ASCC2Q9H1I8 757 aaPredicted RBP16.35■□□□□ 0.21
ABCF1-206ENST00000479542 RAI14Q9P0K7 980 aa16.35■□□□□ 0.21
ABCF1-206ENST00000479542 PNMA6EA0A0J9YXQ4 647 aa16.34■□□□□ 0.21
ABCF1-206ENST00000479542 HMGCRP04035 888 aa16.34■□□□□ 0.21
ABCF1-206ENST00000479542 XRCC5P13010 732 aaKnown RBP16.34■□□□□ 0.21
ABCF1-206ENST00000479542 HMGCS2P54868 508 aa16.34■□□□□ 0.21
ABCF1-206ENST00000479542 POLA2Q14181 598 aa16.34■□□□□ 0.21
ABCF1-206ENST00000479542 RRP1BQ14684 758 aaKnown RBP16.34■□□□□ 0.21
ABCF1-206ENST00000479542 CCDC158Q5M9N0 1113 aa16.34■□□□□ 0.21
ABCF1-206ENST00000479542 NECAB2Q7Z6G3 386 aa16.34■□□□□ 0.21
ABCF1-206ENST00000479542 SSH3Q8TE77 659 aa16.34■□□□□ 0.21
ABCF1-206ENST00000479542 GTF3C2Q8WUA4 911 aaPredicted RBP16.34■□□□□ 0.21
ABCF1-206ENST00000479542 DEFB118Q96PH6 123 aa16.34■□□□□ 0.21
ABCF1-206ENST00000479542 RPTORQ8N122 1335 aa16.34■□□□□ 0.21
ABCF1-206ENST00000479542 EVI5O60447 810 aa16.33■□□□□ 0.2
ABCF1-206ENST00000479542 BMP8BP34820 402 aa16.33■□□□□ 0.2
ABCF1-206ENST00000479542 PI16Q6UXB8 463 aa16.33■□□□□ 0.2
ABCF1-206ENST00000479542 TRMT44Q8IYL2 757 aaKnown RBP16.33■□□□□ 0.2
ABCF1-206ENST00000479542 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.33■□□□□ 0.2
ABCF1-206ENST00000479542 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.33■□□□□ 0.2
ABCF1-206ENST00000479542 ATP8B2P98198 1209 aa16.32■□□□□ 0.2
ABCF1-206ENST00000479542 NAA16Q6N069 864 aaPredicted RBP16.32■□□□□ 0.2
ABCF1-206ENST00000479542 GPR153Q6NV75 609 aa16.32■□□□□ 0.2
ABCF1-206ENST00000479542 CCDC84Q86UT8 332 aaPredicted RBP16.32■□□□□ 0.2
ABCF1-206ENST00000479542 HMX1Q9NP08 348 aaPredicted RBP16.32■□□□□ 0.2
ABCF1-206ENST00000479542 NOP58Q9Y2X3 529 aaKnown RBP16.32■□□□□ 0.2
ABCF1-206ENST00000479542 FAM196BA6NMK8 535 aa16.31■□□□□ 0.2
ABCF1-206ENST00000479542 USP17L10C9JJH3 530 aa16.31■□□□□ 0.2
ABCF1-206ENST00000479542 TNNI3KQ59H18 835 aa16.31■□□□□ 0.2
ABCF1-206ENST00000479542 MAP3K21Q5TCX8 1036 aa16.31■□□□□ 0.2
ABCF1-206ENST00000479542 SH3RF3Q8TEJ3 882 aaPredicted RBP16.31■□□□□ 0.2
ABCF1-206ENST00000479542 PAWRQ96IZ0 340 aaKnown RBP16.31■□□□□ 0.2
ABCF1-206ENST00000479542 TMOD4Q9NZQ9 345 aa16.31■□□□□ 0.2
ABCF1-206ENST00000479542 FPGT-TNNI3KV9GXZ4 949 aa16.31■□□□□ 0.2
ABCF1-206ENST00000479542 CYP2E1P05181 493 aaPredicted RBP16.3■□□□□ 0.2
ABCF1-206ENST00000479542 GPRC5AQ8NFJ5 357 aa16.3■□□□□ 0.2
ABCF1-206ENST00000479542 SOCS4Q8WXH5 440 aa16.3■□□□□ 0.2
ABCF1-206ENST00000479542 AATFQ9NY61 560 aaKnown RBP eCLIP16.3■□□□□ 0.2
ABCF1-206ENST00000479542 OGDHLQ9ULD0 1010 aa16.3■□□□□ 0.2
ABCF1-206ENST00000479542 ATAD5Q96QE3 1844 aa16.3■□□□□ 0.2
ABCF1-206ENST00000479542 FLT1P17948 1338 aa16.29■□□□□ 0.2
ABCF1-206ENST00000479542 BCAR3O75815 825 aa16.29■□□□□ 0.2
ABCF1-206ENST00000479542 MAPK4P31152 587 aa16.29■□□□□ 0.2
ABCF1-206ENST00000479542 HERVK_113P62684 666 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms