RNA–Protein interactions for RNA: ENST00000479413.1

C9orf85-205, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 1 (best)

Gene C9orf85, Length 902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-205ENST00000479413 ANKRD13CQ8N6S4 541 aa17.54■□□□□ 0.4
C9orf85-205ENST00000479413 PXYLP1Q8TE99 480 aa17.54■□□□□ 0.4
C9orf85-205ENST00000479413 ZNF384Q8TF68 577 aa17.54■□□□□ 0.4
C9orf85-205ENST00000479413 FRAT1Q92837 279 aaPredicted RBP17.54■□□□□ 0.4
C9orf85-205ENST00000479413 COA7Q96BR5 231 aa17.54■□□□□ 0.4
C9orf85-205ENST00000479413 UNC93B1Q9H1C4 597 aa17.54■□□□□ 0.4
C9orf85-205ENST00000479413 LRP2BPQ9P2M1 347 aa17.54■□□□□ 0.4
C9orf85-205ENST00000479413 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.54■□□□□ 0.4
C9orf85-205ENST00000479413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.54■□□□□ 0.4
C9orf85-205ENST00000479413 CCER2I3L3R5 266 aa17.53■□□□□ 0.4
C9orf85-205ENST00000479413 INHAP05111 366 aa17.53■□□□□ 0.4
C9orf85-205ENST00000479413 ELNP15502 786 aa17.53■□□□□ 0.4
C9orf85-205ENST00000479413 CAPN2P17655 700 aa17.53■□□□□ 0.4
C9orf85-205ENST00000479413 SPP2Q13103 211 aa17.53■□□□□ 0.4
C9orf85-205ENST00000479413 CHRDL2Q6WN34 429 aa17.53■□□□□ 0.4
C9orf85-205ENST00000479413 UBE2Q1Q7Z7E8 422 aa17.53■□□□□ 0.4
C9orf85-205ENST00000479413 CCDC84Q86UT8 332 aaPredicted RBP17.53■□□□□ 0.4
C9orf85-205ENST00000479413 TEX11Q8IYF3 940 aa17.53■□□□□ 0.4
C9orf85-205ENST00000479413 ZNF280CQ8ND82 737 aa17.53■□□□□ 0.4
C9orf85-205ENST00000479413 TAOK2Q9UL54 1235 aa17.53■□□□□ 0.4
C9orf85-205ENST00000479413 TRIOBPQ9H2D6 2365 aa17.52■□□□□ 0.4
C9orf85-205ENST00000479413 ATAD5Q96QE3 1844 aa17.52■□□□□ 0.4
C9orf85-205ENST00000479413 SGPL1O95470 568 aa17.52■□□□□ 0.4
C9orf85-205ENST00000479413 MCAMP43121 646 aa17.52■□□□□ 0.4
C9orf85-205ENST00000479413 GCLCP48506 637 aaPredicted RBP17.52■□□□□ 0.4
C9orf85-205ENST00000479413 FAM110CQ1W6H9 321 aa17.52■□□□□ 0.4
C9orf85-205ENST00000479413 TREML2Q5T2D2 321 aa17.52■□□□□ 0.4
C9orf85-205ENST00000479413 HERC5Q9UII4 1024 aaKnown RBP17.52■□□□□ 0.4
C9orf85-205ENST00000479413 NR2E3Q9Y5X4 410 aa17.52■□□□□ 0.4
C9orf85-205ENST00000479413 LOC285556D6RIA3 1793 aa17.52■□□□□ 0.4
C9orf85-205ENST00000479413 PNMA6EA0A0J9YXQ4 647 aa17.51■□□□□ 0.39
C9orf85-205ENST00000479413 BAG3O95817 575 aa17.51■□□□□ 0.39
C9orf85-205ENST00000479413 PLCG2P16885 1265 aa17.51■□□□□ 0.39
C9orf85-205ENST00000479413 CAP2P40123 477 aa17.51■□□□□ 0.39
C9orf85-205ENST00000479413 CLUAP1Q96AJ1 413 aa17.51■□□□□ 0.39
C9orf85-205ENST00000479413 DHX36Q9H2U1 1008 aaKnown RBP17.51■□□□□ 0.39
C9orf85-205ENST00000479413 AS3MTQ9HBK9 375 aa17.51■□□□□ 0.39
C9orf85-205ENST00000479413 PI4KBQ9UBF8 816 aa17.51■□□□□ 0.39
C9orf85-205ENST00000479413 MAST2Q6P0Q8 1798 aa17.51■□□□□ 0.39
C9orf85-205ENST00000479413 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
C9orf85-205ENST00000479413 HMGCS2P54868 508 aa17.5■□□□□ 0.39
C9orf85-205ENST00000479413 OS9Q13438 667 aaPredicted RBP17.5■□□□□ 0.39
C9orf85-205ENST00000479413 CCDC158Q5M9N0 1113 aa17.5■□□□□ 0.39
C9orf85-205ENST00000479413 TTC39AQ5SRH9 613 aa17.5■□□□□ 0.39
C9orf85-205ENST00000479413 NAA16Q6N069 864 aaPredicted RBP17.5■□□□□ 0.39
C9orf85-205ENST00000479413 SH3RF3Q8TEJ3 882 aaPredicted RBP17.5■□□□□ 0.39
C9orf85-205ENST00000479413 DEFB118Q96PH6 123 aa17.5■□□□□ 0.39
C9orf85-205ENST00000479413 USP17L5A8MUK1 530 aa17.49■□□□□ 0.39
C9orf85-205ENST00000479413 BCAR3O75815 825 aa17.49■□□□□ 0.39
C9orf85-205ENST00000479413 TRIM34Q9BYJ4 488 aa17.49■□□□□ 0.39
C9orf85-205ENST00000479413 ASCC2Q9H1I8 757 aaPredicted RBP17.48■□□□□ 0.39
C9orf85-205ENST00000479413 GPR108Q9NPR9 543 aa17.48■□□□□ 0.39
C9orf85-205ENST00000479413 PAK6Q9NQU5 681 aaPredicted RBP17.48■□□□□ 0.39
C9orf85-205ENST00000479413 SNRKQ9NRH2 765 aa17.48■□□□□ 0.39
C9orf85-205ENST00000479413 AATFQ9NY61 560 aaKnown RBP eCLIP17.48■□□□□ 0.39
C9orf85-205ENST00000479413 RBM27Q9P2N5 1060 aaKnown RBP17.48■□□□□ 0.39
C9orf85-205ENST00000479413 EVI5O60447 810 aa17.47■□□□□ 0.39
C9orf85-205ENST00000479413 ASNSP08243 561 aa17.47■□□□□ 0.39
C9orf85-205ENST00000479413 IRX3P78415 501 aaPredicted RBP17.47■□□□□ 0.39
C9orf85-205ENST00000479413 TNNI3KQ59H18 835 aa17.47■□□□□ 0.39
C9orf85-205ENST00000479413 SH3D19Q5HYK7 790 aa17.47■□□□□ 0.39
C9orf85-205ENST00000479413 ZKSCAN2Q63HK3 967 aa17.47■□□□□ 0.39
C9orf85-205ENST00000479413 CRACR2BQ8N4Y2 399 aaPredicted RBP17.47■□□□□ 0.39
C9orf85-205ENST00000479413 TMOD4Q9NZQ9 345 aa17.47■□□□□ 0.39
C9orf85-205ENST00000479413 TNNQ9UQP3 1299 aa17.47■□□□□ 0.39
C9orf85-205ENST00000479413 FPGT-TNNI3KV9GXZ4 949 aa17.47■□□□□ 0.39
C9orf85-205ENST00000479413 IGSF3O75054 1194 aa17.46■□□□□ 0.39
C9orf85-205ENST00000479413 HMGCRP04035 888 aa17.46■□□□□ 0.39
C9orf85-205ENST00000479413 MTMR2Q13614 643 aa17.46■□□□□ 0.39
C9orf85-205ENST00000479413 TMEM57Q8N5G2 664 aa17.46■□□□□ 0.39
C9orf85-205ENST00000479413 TGFBRAP1Q8WUH2 860 aa17.46■□□□□ 0.39
C9orf85-205ENST00000479413 WDR18Q9BV38 432 aa17.46■□□□□ 0.39
C9orf85-205ENST00000479413 FLT1P17948 1338 aa17.46■□□□□ 0.38
C9orf85-205ENST00000479413 DOCK3Q8IZD9 2030 aa17.45■□□□□ 0.38
C9orf85-205ENST00000479413 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
C9orf85-205ENST00000479413 PPP4CP60510 307 aa17.45■□□□□ 0.38
C9orf85-205ENST00000479413 POLA2Q14181 598 aa17.45■□□□□ 0.38
C9orf85-205ENST00000479413 RRP1BQ14684 758 aaKnown RBP17.45■□□□□ 0.38
C9orf85-205ENST00000479413 FOXP4Q8IVH2 680 aaPredicted RBP17.45■□□□□ 0.38
C9orf85-205ENST00000479413 MAPKAPK5Q8IW41 473 aa17.45■□□□□ 0.38
C9orf85-205ENST00000479413 DBNDD2Q9BQY9 259 aa17.45■□□□□ 0.38
C9orf85-205ENST00000479413 CRISPLD2Q9H0B8 497 aa17.45■□□□□ 0.38
C9orf85-205ENST00000479413 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.45■□□□□ 0.38
C9orf85-205ENST00000479413 GINM1Q9NU53 330 aa17.45■□□□□ 0.38
C9orf85-205ENST00000479413 SURF6O75683 361 aaKnown RBP17.44■□□□□ 0.38
C9orf85-205ENST00000479413 BACE1P56817 501 aa17.44■□□□□ 0.38
C9orf85-205ENST00000479413 NECAB2Q7Z6G3 386 aa17.44■□□□□ 0.38
C9orf85-205ENST00000479413 FTSJ3Q8IY81 847 aaKnown RBP17.44■□□□□ 0.38
C9orf85-205ENST00000479413 SSH3Q8TE77 659 aa17.44■□□□□ 0.38
C9orf85-205ENST00000479413 ZNF512BQ96KM6 892 aaPredicted RBP17.44■□□□□ 0.38
C9orf85-205ENST00000479413 SIPA1L1O43166 1804 aa17.44■□□□□ 0.38
C9orf85-205ENST00000479413 FOCADQ5VW36 1801 aa17.44■□□□□ 0.38
C9orf85-205ENST00000479413 C19orf81C9J6K1 198 aa17.43■□□□□ 0.38
C9orf85-205ENST00000479413 CYP2E1P05181 493 aaPredicted RBP17.43■□□□□ 0.38
C9orf85-205ENST00000479413 HLA-DOAP06340 250 aa17.43■□□□□ 0.38
C9orf85-205ENST00000479413 ATP8B2P98198 1209 aa17.43■□□□□ 0.38
C9orf85-205ENST00000479413 PAWRQ96IZ0 340 aaKnown RBP17.43■□□□□ 0.38
C9orf85-205ENST00000479413 HMX1Q9NP08 348 aaPredicted RBP17.43■□□□□ 0.38
C9orf85-205ENST00000479413 MORF4L1Q9UBU8 362 aa17.43■□□□□ 0.38
C9orf85-205ENST00000479413 CDK5RAP2Q96SN8 1893 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms