RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PPP6R2O75170 966 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 CDC27P30260 824 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 NDUFA8P51970 172 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 SART3Q15020 963 aaKnown RBP19.05■□□□□ 0.64
TMEM53-208ENST00000476724 KRT40Q6A162 431 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 KIAA1468Q9P260 1216 aa19.05■□□□□ 0.64
TMEM53-208ENST00000476724 ZRSR1Q15695 479 aaKnown RBP19.04■□□□□ 0.64
TMEM53-208ENST00000476724 MSL1Q68DK7 614 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 FBXO33Q7Z6M2 555 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 MICU3Q86XE3 530 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 NLGN1Q8N2Q7 840 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 MYRIPQ8NFW9 859 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 TIGD1Q96MW7 591 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 RNF41Q9H4P4 317 aaPredicted RBP19.04■□□□□ 0.64
TMEM53-208ENST00000476724 CLIP2Q9UDT6 1046 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 PYCARDQ9ULZ3 195 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 IRS2Q9Y4H2 1338 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 RCAN1P53805 252 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 VPS37DQ86XT2 251 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 CAMKK2Q96RR4 588 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 BPIFA3Q9BQP9 254 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 GNL3LQ9NVN8 582 aaKnown RBP19.04■□□□□ 0.64
TMEM53-208ENST00000476724 LRP2BPQ9P2M1 347 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 SLC4A4Q9Y6R1 1079 aa19.04■□□□□ 0.64
TMEM53-208ENST00000476724 U2AF2P26368 475 aaKnown RBP eCLIP19.03■□□□□ 0.64
TMEM53-208ENST00000476724 TDO2P48775 406 aa19.03■□□□□ 0.64
TMEM53-208ENST00000476724 CTDSPL2Q05D32 466 aa19.03■□□□□ 0.64
TMEM53-208ENST00000476724 SSRP1Q08945 709 aaKnown RBP19.03■□□□□ 0.64
TMEM53-208ENST00000476724 AXDND1Q5T1B0 1012 aaPredicted RBP19.03■□□□□ 0.64
TMEM53-208ENST00000476724 NKX2-3Q8TAU0 364 aa19.03■□□□□ 0.64
TMEM53-208ENST00000476724 GJB4Q9NTQ9 266 aa19.03■□□□□ 0.64
TMEM53-208ENST00000476724 NEMFO60524 1076 aa19.02■□□□□ 0.64
TMEM53-208ENST00000476724 ZNF202O95125 648 aa19.02■□□□□ 0.64
TMEM53-208ENST00000476724 IFNAR1P17181 557 aa19.02■□□□□ 0.64
TMEM53-208ENST00000476724 GNL2Q13823 731 aaKnown RBP19.02■□□□□ 0.64
TMEM53-208ENST00000476724 DHX40Q8IX18 779 aaKnown RBP19.02■□□□□ 0.64
TMEM53-208ENST00000476724 FLAD1Q8NFF5 587 aa19.02■□□□□ 0.64
TMEM53-208ENST00000476724 MAP7D2Q96T17 732 aa19.02■□□□□ 0.64
TMEM53-208ENST00000476724 FAM217BQ9NTX9 383 aaPredicted RBP19.02■□□□□ 0.64
TMEM53-208ENST00000476724 ANKIB1Q9P2G1 1089 aa19.02■□□□□ 0.64
TMEM53-208ENST00000476724 ERICH2A1L162 156 aa19.02■□□□□ 0.63
TMEM53-208ENST00000476724 FMNL1O95466 1100 aaPredicted RBP19.02■□□□□ 0.63
TMEM53-208ENST00000476724 LCORLQ8N3X6 602 aa19.02■□□□□ 0.63
TMEM53-208ENST00000476724 RBM17Q96I25 401 aaKnown RBP19.02■□□□□ 0.63
TMEM53-208ENST00000476724 GPR101Q96P66 508 aaPredicted RBP19.02■□□□□ 0.63
TMEM53-208ENST00000476724 SENP2Q9HC62 589 aa19.02■□□□□ 0.63
TMEM53-208ENST00000476724 ABCF2Q9UG63 623 aa19.02■□□□□ 0.63
TMEM53-208ENST00000476724 KLRG2A4D1S0 409 aaPredicted RBP19.01■□□□□ 0.63
TMEM53-208ENST00000476724 SLC3A2P08195 630 aaKnown RBP19.01■□□□□ 0.63
TMEM53-208ENST00000476724 MMP10P09238 476 aa19.01■□□□□ 0.63
TMEM53-208ENST00000476724 RXRAP19793 462 aa19.01■□□□□ 0.63
TMEM53-208ENST00000476724 HIBADHP31937 336 aaKnown RBP19.01■□□□□ 0.63
TMEM53-208ENST00000476724 CACNA1SQ13698 1873 aa19.01■□□□□ 0.63
TMEM53-208ENST00000476724 C17orf53Q8N3J3 647 aaPredicted RBP19.01■□□□□ 0.63
TMEM53-208ENST00000476724 PHKBQ93100 1093 aa19.01■□□□□ 0.63
TMEM53-208ENST00000476724 PDCL3Q9H2J4 239 aa19.01■□□□□ 0.63
TMEM53-208ENST00000476724 CCDC196A0A1B0GTZ2 297 aa19.01■□□□□ 0.63
TMEM53-208ENST00000476724 GPSM2P81274 684 aa19.01■□□□□ 0.63
TMEM53-208ENST00000476724 AIFM3Q96NN9 605 aa19.01■□□□□ 0.63
TMEM53-208ENST00000476724 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.01■□□□□ 0.63
TMEM53-208ENST00000476724 FAM237AA0A1B0GTK4 181 aa19■□□□□ 0.63
TMEM53-208ENST00000476724 RANBP6O60518 1105 aaKnown RBP19■□□□□ 0.63
TMEM53-208ENST00000476724 PFKFB1P16118 471 aa19■□□□□ 0.63
TMEM53-208ENST00000476724 HOXA10P31260 410 aaPredicted RBP19■□□□□ 0.63
TMEM53-208ENST00000476724 GTF2F1P35269 517 aaKnown RBP eCLIP19■□□□□ 0.63
TMEM53-208ENST00000476724 CHAF1AQ13111 956 aaPredicted RBP19■□□□□ 0.63
TMEM53-208ENST00000476724 WTAPQ15007 396 aa19■□□□□ 0.63
TMEM53-208ENST00000476724 MTERF4Q7Z6M4 381 aaKnown RBP19■□□□□ 0.63
TMEM53-208ENST00000476724 TRIM22Q8IYM9 498 aa19■□□□□ 0.63
TMEM53-208ENST00000476724 NRBP1Q9UHY1 535 aa19■□□□□ 0.63
TMEM53-208ENST00000476724 COL11A2P13942 1736 aaPredicted RBP19■□□□□ 0.63
TMEM53-208ENST00000476724 XDHP47989 1333 aa19■□□□□ 0.63
TMEM53-208ENST00000476724 PRKAB2O43741 272 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 PPP2R5BQ15173 497 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 PTPAQ15257 358 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 SLC15A2Q16348 729 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 ADGRA1Q86SQ6 560 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.99■□□□□ 0.63
TMEM53-208ENST00000476724 INCENPQ9NQS7 918 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 ECM29Q5VYK3 1845 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 CYP7A1P22680 504 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 NLRP12P59046 1061 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 SAFBQ15424 915 aaKnown RBP eCLIP18.99■□□□□ 0.63
TMEM53-208ENST00000476724 CCDC144CPQ8IYA2 1237 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 MAP3K14Q99558 947 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 SLC26A6Q9BXS9 759 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 ANAPC4Q9UJX5 808 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 JAG2Q9Y219 1238 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 LEMD3Q9Y2U8 911 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 TACC3Q9Y6A5 838 aa18.99■□□□□ 0.63
TMEM53-208ENST00000476724 WDHD1O75717 1129 aaPredicted RBP18.98■□□□□ 0.63
TMEM53-208ENST00000476724 PPARAQ07869 468 aa18.98■□□□□ 0.63
TMEM53-208ENST00000476724 RAI14Q9P0K7 980 aa18.98■□□□□ 0.63
TMEM53-208ENST00000476724 HPSEQ9Y251 543 aa18.98■□□□□ 0.63
TMEM53-208ENST00000476724 CUTAO60888 179 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 SYKP43405 635 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 TPM4P67936 248 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 RTN1Q16799 776 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 AOPEPQ8N6M6 819 aa18.97■□□□□ 0.63
TMEM53-208ENST00000476724 MIGA1Q8NAN2 632 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms