RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-229ENST00000475651 IKZF1Q13422 519 aa5.77□□□□□ -1.49
RBM39-229ENST00000475651 TTLL4Q14679 1199 aa5.77□□□□□ -1.49
RBM39-229ENST00000475651 FBLN7Q53RD9 439 aa5.77□□□□□ -1.49
RBM39-229ENST00000475651 LCE4AQ5TA78 99 aa5.77□□□□□ -1.49
RBM39-229ENST00000475651 PRPF40BQ6NWY9 871 aaKnown RBP5.77□□□□□ -1.49
RBM39-229ENST00000475651 GLIS3Q8NEA6 775 aa5.77□□□□□ -1.49
RBM39-229ENST00000475651 KRTAP9-8Q9BYQ0 159 aa5.77□□□□□ -1.49
RBM39-229ENST00000475651 CCDC86Q9H6F5 360 aaKnown RBP5.77□□□□□ -1.49
RBM39-229ENST00000475651 TMEM39AQ9NV64 488 aa5.77□□□□□ -1.49
RBM39-229ENST00000475651 SAMM50Q9Y512 469 aa5.77□□□□□ -1.49
RBM39-229ENST00000475651 PHLDB1Q86UU1 1377 aa5.77□□□□□ -1.49
RBM39-229ENST00000475651 AQRO60306 1485 aaKnown RBP eCLIP5.77□□□□□ -1.491e-12■■■□□ 18.3
RBM39-229ENST00000475651 HCLS1P14317 486 aaPredicted RBP5.76□□□□□ -1.49
RBM39-229ENST00000475651 AFMP43652 599 aa5.76□□□□□ -1.49
RBM39-229ENST00000475651 KIF4BQ2VIQ3 1234 aa5.76□□□□□ -1.49
RBM39-229ENST00000475651 MPZL3Q6UWV2 235 aa5.76□□□□□ -1.49
RBM39-229ENST00000475651 LRRN4CLQ8ND94 238 aa5.76□□□□□ -1.49
RBM39-229ENST00000475651 DUSP23Q9BVJ7 150 aa5.76□□□□□ -1.49
RBM39-229ENST00000475651 MBNL3Q9NUK0 354 aaKnown RBP5.76□□□□□ -1.49
RBM39-229ENST00000475651 CDK11AQ9UQ88 783 aaPredicted RBP5.76□□□□□ -1.49
RBM39-229ENST00000475651 CC2D2AQ9P2K1 1620 aa5.76□□□□□ -1.49
RBM39-229ENST00000475651 RAD54L2Q9Y4B4 1467 aa5.76□□□□□ -1.49
RBM39-229ENST00000475651 TOPBP1Q92547 1522 aa5.75□□□□□ -1.49
RBM39-229ENST00000475651 PRDM2Q13029 1718 aa5.75□□□□□ -1.49
RBM39-229ENST00000475651 CCER2I3L3R5 266 aa5.75□□□□□ -1.49
RBM39-229ENST00000475651 ZNF157P51786 506 aaPredicted RBP5.75□□□□□ -1.49
RBM39-229ENST00000475651 CDC37L1Q7L3B6 337 aa5.75□□□□□ -1.49
RBM39-229ENST00000475651 TOP6BLQ8N6T0 577 aa5.75□□□□□ -1.49
RBM39-229ENST00000475651 FLAD1Q8NFF5 587 aa5.75□□□□□ -1.49
RBM39-229ENST00000475651 CCDC74AQ96AQ1 378 aa5.75□□□□□ -1.49
RBM39-229ENST00000475651 CCDC120Q96HB5 630 aa5.75□□□□□ -1.49
RBM39-229ENST00000475651 SIN3AQ96ST3 1273 aa5.75□□□□□ -1.49
RBM39-229ENST00000475651 ABCB6Q9NP58 842 aa5.75□□□□□ -1.49
RBM39-229ENST00000475651 ZP2Q05996 745 aa5.74□□□□□ -1.49
RBM39-229ENST00000475651 PDE4CQ08493 712 aa5.74□□□□□ -1.49
RBM39-229ENST00000475651 MLANAQ16655 118 aa5.74□□□□□ -1.49
RBM39-229ENST00000475651 USPL1Q5W0Q7 1092 aa5.74□□□□□ -1.49
RBM39-229ENST00000475651 KCT2Q8NC54 265 aa5.74□□□□□ -1.49
RBM39-229ENST00000475651 DMRTB1Q96MA1 342 aa5.74□□□□□ -1.49
RBM39-229ENST00000475651 DISC1Q9NRI5 854 aa5.74□□□□□ -1.49
RBM39-229ENST00000475651 USTQ9Y2C2 406 aa5.74□□□□□ -1.49
RBM39-229ENST00000475651 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.74□□□□□ -1.49
RBM39-229ENST00000475651 POLA1P09884 1462 aaPredicted RBP5.74□□□□□ -1.49
RBM39-229ENST00000475651 CUL7Q14999 1698 aa5.74□□□□□ -1.49
RBM39-229ENST00000475651 CARMIL2Q6F5E8 1435 aa5.74□□□□□ -1.49
RBM39-229ENST00000475651 GAPVD1Q14C86 1478 aa5.73□□□□□ -1.49
RBM39-229ENST00000475651 TDRD9Q8NDG6 1382 aaKnown RBP5.73□□□□□ -1.49
RBM39-229ENST00000475651 ARID3CA6NKF2 412 aa5.73□□□□□ -1.49
RBM39-229ENST00000475651 EIF1AYO14602 144 aaKnown RBP5.73□□□□□ -1.49
RBM39-229ENST00000475651 OXCT1P55809 520 aa5.73□□□□□ -1.49
RBM39-229ENST00000475651 ERVK-24P63145 666 aa5.73□□□□□ -1.49
RBM39-229ENST00000475651 ORC1Q13415 861 aa5.73□□□□□ -1.49
RBM39-229ENST00000475651 ANKLE2Q86XL3 938 aa5.73□□□□□ -1.49
RBM39-229ENST00000475651 CCDC82Q8N4S0 544 aa5.73□□□□□ -1.49
RBM39-229ENST00000475651 RNF214Q8ND24 703 aa5.73□□□□□ -1.49
RBM39-229ENST00000475651 CBX8Q9HC52 389 aa5.73□□□□□ -1.49
RBM39-229ENST00000475651 SUPT16HQ9Y5B9 1047 aaKnown RBP5.73□□□□□ -1.49
RBM39-229ENST00000475651 FGD6Q6ZV73 1430 aa5.73□□□□□ -1.49
RBM39-229ENST00000475651 IGF2BP3O00425 579 aaKnown RBP eCLIP5.72□□□□□ -1.49
RBM39-229ENST00000475651 CLCN7P51798 805 aa5.72□□□□□ -1.49
RBM39-229ENST00000475651 FCGRTP55899 365 aa5.72□□□□□ -1.49
RBM39-229ENST00000475651 MAP1SQ66K74 1059 aaPredicted RBP5.72□□□□□ -1.49
RBM39-229ENST00000475651 SULF2Q8IWU5 870 aa5.72□□□□□ -1.49
RBM39-229ENST00000475651 NIF3L1Q9GZT8 377 aa5.72□□□□□ -1.49
RBM39-229ENST00000475651 PCF11O94913 1555 aaKnown RBP5.72□□□□□ -1.49
RBM39-229ENST00000475651 LAMC3Q9Y6N6 1575 aa5.72□□□□□ -1.49
RBM39-229ENST00000475651 CCDC18Q5T9S5 1454 aa5.71□□□□□ -1.49
RBM39-229ENST00000475651 FAM155AB1AL88 458 aaPredicted RBP5.71□□□□□ -1.5
RBM39-229ENST00000475651 ZNF862O60290 1169 aa5.71□□□□□ -1.5
RBM39-229ENST00000475651 LEFTY1O75610 366 aa5.71□□□□□ -1.5
RBM39-229ENST00000475651 ARNTP27540 789 aa5.71□□□□□ -1.5
RBM39-229ENST00000475651 TMEM67Q5HYA8 995 aa5.71□□□□□ -1.5
RBM39-229ENST00000475651 ISL2Q96A47 359 aa5.71□□□□□ -1.5
RBM39-229ENST00000475651 WDR89Q96FK6 387 aaPredicted RBP5.71□□□□□ -1.5
RBM39-229ENST00000475651 CSRNP1Q96S65 589 aa5.71□□□□□ -1.5
RBM39-229ENST00000475651 FAM129BQ96TA1 746 aa5.71□□□□□ -1.5
RBM39-229ENST00000475651 FOXQ1Q9C009 403 aa5.71□□□□□ -1.5
RBM39-229ENST00000475651 PRDM10Q9NQV6 1147 aa5.71□□□□□ -1.5
RBM39-229ENST00000475651 PRDM5Q9NQX1 630 aaPredicted RBP5.71□□□□□ -1.5
RBM39-229ENST00000475651 ADAMTS6Q9UKP5 1117 aa5.71□□□□□ -1.5
RBM39-229ENST00000475651 AKAP2Q9Y2D5 859 aa5.71□□□□□ -1.5
RBM39-229ENST00000475651 UACAQ9BZF9 1416 aa5.71□□□□□ -1.5
RBM39-229ENST00000475651 NFIBO00712 420 aa5.7□□□□□ -1.5
RBM39-229ENST00000475651 NME2P22392 152 aa5.7□□□□□ -1.5
RBM39-229ENST00000475651 CD96P40200 585 aa5.7□□□□□ -1.5
RBM39-229ENST00000475651 GRM2Q14416 872 aa5.7□□□□□ -1.5
RBM39-229ENST00000475651 CEP44Q9C0F1 390 aa5.7□□□□□ -1.5
RBM39-229ENST00000475651 TNKS2Q9H2K2 1166 aa5.7□□□□□ -1.5
RBM39-229ENST00000475651 LMCD1Q9NZU5 365 aa5.7□□□□□ -1.5
RBM39-229ENST00000475651 HFM1A2PYH4 1435 aa5.7□□□□□ -1.5
RBM39-229ENST00000475651 MYOM3Q5VTT5 1437 aa5.7□□□□□ -1.5
RBM39-229ENST00000475651 CFAP43Q8NDM7 1665 aa5.69□□□□□ -1.5
RBM39-229ENST00000475651 TSPAN15O95858 294 aa5.69□□□□□ -1.5
RBM39-229ENST00000475651 GLI1P08151 1106 aa5.69□□□□□ -1.5
RBM39-229ENST00000475651 LRRC14Q15048 493 aa5.69□□□□□ -1.5
RBM39-229ENST00000475651 PHLDB3Q6NSJ2 640 aa5.69□□□□□ -1.5
RBM39-229ENST00000475651 ZNF746Q6NUN9 644 aaPredicted RBP5.69□□□□□ -1.5
RBM39-229ENST00000475651 CYFIP1Q7L576 1253 aa5.69□□□□□ -1.5
RBM39-229ENST00000475651 WFDC3Q8IUB2 231 aa5.69□□□□□ -1.5
RBM39-229ENST00000475651 KIRREL1Q96J84 757 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms