RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 DUOX1Q9NRD9 1551 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 FAM193AP78312 1265 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 PKDCCQ504Y2 493 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 KANK3Q6NY19 840 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 GGT6Q6P531 493 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 CHMP4CQ96CF2 233 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 NUCKS1Q9H1E3 243 aaKnown RBP3.55□□□□□ -1.84
CCNL1-214ENST00000471247 PRKRIP1Q9H875 184 aaPredicted RBP3.55□□□□□ -1.84
CCNL1-214ENST00000471247 KLF15Q9UIH9 416 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 RBBP6Q7Z6E9 1792 aaKnown RBP3.55□□□□□ -1.84
CCNL1-214ENST00000471247 BMP2P12643 396 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 BMP1P13497 986 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 GARTP22102 1010 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 GAS6Q14393 721 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 TMEM63CQ9P1W3 806 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 PARP2Q9UGN5 583 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 PLEKHH1Q9ULM0 1364 aa3.55□□□□□ -1.84
CCNL1-214ENST00000471247 MYO5AQ9Y4I1 1855 aaKnown RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 KCNJ4P48050 445 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 FTSJ3Q8IY81 847 aaKnown RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 CCDC74AQ96AQ1 378 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 CRELD1Q96HD1 420 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 CNTNAP3BQ96NU0 1288 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 TINF2Q9BSI4 451 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 CNTNAP3Q9BZ76 1288 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 ELP3Q9H9T3 547 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 TOMM22Q9NS69 142 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 CNTN3Q9P232 1028 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 ZFATQ9P243 1243 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 DDX41Q9UJV9 622 aaKnown RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 PHF24Q9UPV7 400 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 NPHP4O75161 1426 aaPredicted RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 HOXB4P17483 251 aaPredicted RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 RBL2Q08999 1139 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 COL9A2Q14055 689 aaPredicted RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 TBCELQ5QJ74 424 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 CC2D1BQ5T0F9 858 aaKnown RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 PEAR1Q5VY43 1037 aaPredicted RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 CCNJLQ8IV13 435 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 NUDT16Q96DE0 195 aaKnown RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 SPATA32Q96LK8 384 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 UPF2Q9HAU5 1272 aaKnown RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 MRS2Q9HD23 443 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 MBIPQ9NS73 344 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 MAST2Q6P0Q8 1798 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 CRB1P82279 1406 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 A0A1W2PP55 124 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 LDHBP07195 334 aaKnown RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 TSPY4P0CV99 314 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 TSPY10P0CW01 314 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 MAPTP10636 758 aaKnown RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 RLBP1P12271 317 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 IBSPP21815 317 aaPredicted RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 HDLBPQ00341 1268 aaKnown RBP3.54□□□□□ -1.84
CCNL1-214ENST00000471247 C6orf118Q5T5N4 469 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 TMX1Q9H3N1 280 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 MARK1Q9P0L2 795 aa3.54□□□□□ -1.84
CCNL1-214ENST00000471247 DISP2A7MBM2 1401 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 EDC4Q6P2E9 1401 aaKnown RBP3.53□□□□□ -1.84
CCNL1-214ENST00000471247 GREM1O60565 184 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 CALRP27797 417 aaKnown RBP3.53□□□□□ -1.84
CCNL1-214ENST00000471247 COL9A3Q14050 684 aaPredicted RBP3.53□□□□□ -1.84
CCNL1-214ENST00000471247 SKIDA1Q1XH10 827 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 STRN4Q9NRL3 753 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 ABI2Q9NYB9 513 aaPredicted RBP3.53□□□□□ -1.84
CCNL1-214ENST00000471247 SPG7Q9UQ90 795 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 USP6P35125 1406 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 A0A1W2PP64 1363 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 PARP14Q460N5 1801 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 GON4LQ3T8J9 2241 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 ZBTB42B2RXF5 422 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 ST8SIA5O15466 376 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 GJA8P48165 433 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 SV2AQ7L0J3 742 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 RBBP8NLQ8NC74 664 aaPredicted RBP3.53□□□□□ -1.84
CCNL1-214ENST00000471247 TMC1Q8TDI8 760 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 IRX2Q9BZI1 471 aaPredicted RBP3.53□□□□□ -1.84
CCNL1-214ENST00000471247 KIF24Q5T7B8 1368 aa3.53□□□□□ -1.84
CCNL1-214ENST00000471247 CHD4Q14839 1912 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 TMEM238LA0A1B0GVL6 79 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 C2CD2LO14523 706 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 TCF3P15923 654 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 FGFR3P22607 806 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 NFX1Q12986 1120 aaKnown RBP3.52□□□□□ -1.85
CCNL1-214ENST00000471247 SLCO4C1Q6ZQN7 724 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 MKL1Q969V6 931 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 NXPE3Q969Y0 559 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 GSX1Q9H4S2 264 aaPredicted RBP3.52□□□□□ -1.85
CCNL1-214ENST00000471247 HDAC5Q9UQL6 1122 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 PXDNLA1KZ92 1463 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 KDM2BQ8NHM5 1336 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 PRR36Q9H6K5 1346 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 EFHC2Q5JST6 749 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 TAB3Q8N5C8 712 aaPredicted RBP3.52□□□□□ -1.85
CCNL1-214ENST00000471247 RHOVQ96L33 236 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 DACH1Q9UI36 760 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 SOX13Q9UN79 622 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 BCL9LQ86UU0 1499 aa3.52□□□□□ -1.85
CCNL1-214ENST00000471247 ANKRD31Q8N7Z5 1873 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms