RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 ADORA1P30542 326 aa18.02■□□□□ 0.48
NCK1-202ENST00000460960 ANKRD13CQ8N6S4 541 aa18.02■□□□□ 0.48
NCK1-202ENST00000460960 COA7Q96BR5 231 aa18.02■□□□□ 0.48
NCK1-202ENST00000460960 G3BP1Q13283 466 aaKnown RBP eCLIP18.01■□□□□ 0.47
NCK1-202ENST00000460960 ZGPATQ8N5A5 531 aaKnown RBP18.01■□□□□ 0.47
NCK1-202ENST00000460960 PRO3102Q9H379 93 aa18.01■□□□□ 0.47
NCK1-202ENST00000460960 STAP2Q9UGK3 403 aa18.01■□□□□ 0.47
NCK1-202ENST00000460960 ATRNL1Q5VV63 1379 aa18.01■□□□□ 0.47
NCK1-202ENST00000460960 SALL1Q9NSC2 1324 aa18■□□□□ 0.47
NCK1-202ENST00000460960 DOCK3Q8IZD9 2030 aa18■□□□□ 0.47
NCK1-202ENST00000460960 DDTLA6NHG4 134 aaPredicted RBP18■□□□□ 0.47
NCK1-202ENST00000460960 APBB1O00213 710 aa18■□□□□ 0.47
NCK1-202ENST00000460960 SEMA3EO15041 775 aa18■□□□□ 0.47
NCK1-202ENST00000460960 TIMM10P62072 90 aa18■□□□□ 0.47
NCK1-202ENST00000460960 SH3BP5LQ7L8J4 393 aa18■□□□□ 0.47
NCK1-202ENST00000460960 PXYLP1Q8TE99 480 aa18■□□□□ 0.47
NCK1-202ENST00000460960 PAWRQ96IZ0 340 aaKnown RBP18■□□□□ 0.47
NCK1-202ENST00000460960 IDI2Q9BXS1 227 aa18■□□□□ 0.47
NCK1-202ENST00000460960 SLC45A1Q9Y2W3 748 aa18■□□□□ 0.47
NCK1-202ENST00000460960 RANBP2P49792 3224 aaKnown RBP17.99■□□□□ 0.47
NCK1-202ENST00000460960 DLL1O00548 723 aa17.99■□□□□ 0.47
NCK1-202ENST00000460960 CTNND1O60716 968 aaKnown RBP17.99■□□□□ 0.47
NCK1-202ENST00000460960 BTDP43251 543 aa17.99■□□□□ 0.47
NCK1-202ENST00000460960 OS9Q13438 667 aaPredicted RBP17.99■□□□□ 0.47
NCK1-202ENST00000460960 IRF5Q13568 498 aa17.99■□□□□ 0.47
NCK1-202ENST00000460960 SLF2Q8IX21 1173 aa17.99■□□□□ 0.47
NCK1-202ENST00000460960 LRCH3Q96II8 777 aa17.99■□□□□ 0.47
NCK1-202ENST00000460960 DDX4Q9NQI0 724 aaKnown RBP17.99■□□□□ 0.47
NCK1-202ENST00000460960 PNMA3Q9UL41 463 aa17.99■□□□□ 0.47
NCK1-202ENST00000460960 AGTPBP1Q9UPW5 1226 aa17.99■□□□□ 0.47
NCK1-202ENST00000460960 PHIPQ8WWQ0 1821 aa17.99■□□□□ 0.47
NCK1-202ENST00000460960 FAM196BA6NMK8 535 aa17.98■□□□□ 0.47
NCK1-202ENST00000460960 SOX1O00570 391 aaPredicted RBP17.98■□□□□ 0.47
NCK1-202ENST00000460960 TREML2Q5T2D2 321 aa17.98■□□□□ 0.47
NCK1-202ENST00000460960 CCDC102BQ68D86 513 aa17.98■□□□□ 0.47
NCK1-202ENST00000460960 C7orf61Q8IZ16 206 aa17.98■□□□□ 0.47
NCK1-202ENST00000460960 DIS3LQ8TF46 1054 aaKnown RBP17.98■□□□□ 0.47
NCK1-202ENST00000460960 GAKO14976 1311 aa17.98■□□□□ 0.47
NCK1-202ENST00000460960 A0A1B0GUL7 405 aa17.97■□□□□ 0.47
NCK1-202ENST00000460960 A0A1W2PPC1 479 aa17.97■□□□□ 0.47
NCK1-202ENST00000460960 HMMRO75330 724 aa17.97■□□□□ 0.47
NCK1-202ENST00000460960 RASGRF1Q13972 1273 aa17.97■□□□□ 0.47
NCK1-202ENST00000460960 NECAB2Q7Z6G3 386 aa17.97■□□□□ 0.47
NCK1-202ENST00000460960 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.97■□□□□ 0.47
NCK1-202ENST00000460960 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.97■□□□□ 0.47
NCK1-202ENST00000460960 PAK6Q9NQU5 681 aaPredicted RBP17.97■□□□□ 0.47
NCK1-202ENST00000460960 ZMYND8Q9ULU4 1186 aaPredicted RBP17.97■□□□□ 0.47
NCK1-202ENST00000460960 ALPK3Q96L96 1907 aa17.97■□□□□ 0.47
NCK1-202ENST00000460960 RFX7Q2KHR2 1363 aa17.96■□□□□ 0.47
NCK1-202ENST00000460960 SPTY2D1Q68D10 685 aaPredicted RBP17.96■□□□□ 0.47
NCK1-202ENST00000460960 IL1RAPL2Q9NP60 686 aa17.96■□□□□ 0.47
NCK1-202ENST00000460960 TLR7Q9NYK1 1049 aaKnown RBP17.96■□□□□ 0.47
NCK1-202ENST00000460960 MROH7-TTC4A0A0A0MT08 1334 aa17.96■□□□□ 0.46
NCK1-202ENST00000460960 SMARCA5O60264 1052 aaPredicted RBP17.95■□□□□ 0.46
NCK1-202ENST00000460960 CENPBP07199 599 aaPredicted RBP17.95■□□□□ 0.46
NCK1-202ENST00000460960 SPP2Q13103 211 aa17.95■□□□□ 0.46
NCK1-202ENST00000460960 FAM110CQ1W6H9 321 aa17.95■□□□□ 0.46
NCK1-202ENST00000460960 TNNI3KQ59H18 835 aa17.95■□□□□ 0.46
NCK1-202ENST00000460960 ERICH6Q7L0X2 663 aa17.95■□□□□ 0.46
NCK1-202ENST00000460960 RHPN1Q8TCX5 695 aa17.95■□□□□ 0.46
NCK1-202ENST00000460960 EAF2Q96CJ1 260 aaPredicted RBP17.95■□□□□ 0.46
NCK1-202ENST00000460960 XAGE2Q96GT9 111 aa17.95■□□□□ 0.46
NCK1-202ENST00000460960 BCL11AQ9H165 835 aa17.95■□□□□ 0.46
NCK1-202ENST00000460960 FPGT-TNNI3KV9GXZ4 949 aa17.95■□□□□ 0.46
NCK1-202ENST00000460960 IGHDP01880 384 aa17.94■□□□□ 0.46
NCK1-202ENST00000460960 HMGCRP04035 888 aa17.94■□□□□ 0.46
NCK1-202ENST00000460960 CAPN2P17655 700 aa17.94■□□□□ 0.46
NCK1-202ENST00000460960 HMGCS2P54868 508 aa17.94■□□□□ 0.46
NCK1-202ENST00000460960 MAP3K10Q02779 954 aa17.94■□□□□ 0.46
NCK1-202ENST00000460960 NEUROD6Q96NK8 337 aa17.94■□□□□ 0.46
NCK1-202ENST00000460960 CRISPLD2Q9H0B8 497 aa17.94■□□□□ 0.46
NCK1-202ENST00000460960 DCTPP1Q9H773 170 aa17.94■□□□□ 0.46
NCK1-202ENST00000460960 ATAD5Q96QE3 1844 aa17.93■□□□□ 0.46
NCK1-202ENST00000460960 MECOMQ03112 1051 aa17.93■□□□□ 0.46
NCK1-202ENST00000460960 PABPC4Q13310 644 aaKnown RBP eCLIP17.93■□□□□ 0.46
NCK1-202ENST00000460960 PROCA1Q8NCQ7 364 aaPredicted RBP17.93■□□□□ 0.46
NCK1-202ENST00000460960 DBNDD2Q9BQY9 259 aa17.93■□□□□ 0.46
NCK1-202ENST00000460960 CCDC8Q9H0W5 538 aaPredicted RBP17.93■□□□□ 0.46
NCK1-202ENST00000460960 SYN1P17600 705 aa17.92■□□□□ 0.46
NCK1-202ENST00000460960 GCLCP48506 637 aaPredicted RBP17.92■□□□□ 0.46
NCK1-202ENST00000460960 TRIM32Q13049 653 aa17.92■□□□□ 0.46
NCK1-202ENST00000460960 ZNF280CQ8ND82 737 aa17.92■□□□□ 0.46
NCK1-202ENST00000460960 FAM163AQ96GL9 167 aaPredicted RBP17.92■□□□□ 0.46
NCK1-202ENST00000460960 OSBPL5Q9H0X9 879 aaPredicted RBP17.92■□□□□ 0.46
NCK1-202ENST00000460960 HMX1Q9NP08 348 aaPredicted RBP17.92■□□□□ 0.46
NCK1-202ENST00000460960 DBNLQ9UJU6 430 aaKnown RBP17.92■□□□□ 0.46
NCK1-202ENST00000460960 AKAP2Q9Y2D5 859 aa17.92■□□□□ 0.46
NCK1-202ENST00000460960 HDAC1Q13547 482 aaPredicted RBP17.91■□□□□ 0.46
NCK1-202ENST00000460960 GORABQ5T7V8 394 aa17.91■□□□□ 0.46
NCK1-202ENST00000460960 ERC1Q8IUD2 1116 aa17.91■□□□□ 0.46
NCK1-202ENST00000460960 NBPF3Q9H094 633 aa17.91■□□□□ 0.46
NCK1-202ENST00000460960 ASCC2Q9H1I8 757 aaPredicted RBP17.91■□□□□ 0.46
NCK1-202ENST00000460960 GPR108Q9NPR9 543 aa17.91■□□□□ 0.46
NCK1-202ENST00000460960 RAI14Q9P0K7 980 aa17.91■□□□□ 0.46
NCK1-202ENST00000460960 LOC285556D6RIA3 1793 aa17.91■□□□□ 0.46
NCK1-202ENST00000460960 DDX60LQ5H9U9 1706 aaKnown RBP17.9■□□□□ 0.46
NCK1-202ENST00000460960 GPR75-ASB3A0A0A6YYF3 556 aa17.9■□□□□ 0.46
NCK1-202ENST00000460960 TBC1D12O60347 775 aa17.9■□□□□ 0.46
NCK1-202ENST00000460960 RAB11FIP3O75154 756 aa17.9■□□□□ 0.46
NCK1-202ENST00000460960 RHBDL3P58872 404 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms