RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 PNMA6AP0CW24 399 aaPredicted RBP11.28□□□□□ -0.6
THBS3-203ENST00000457183 CRY2Q49AN0 593 aa11.28□□□□□ -0.6
THBS3-203ENST00000457183 CHST3Q7LGC8 479 aa11.28□□□□□ -0.6
THBS3-203ENST00000457183 HOMER1Q86YM7 354 aa11.28□□□□□ -0.6
THBS3-203ENST00000457183 LINC00301Q8NCQ3 95 aa11.28□□□□□ -0.6
THBS3-203ENST00000457183 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.28□□□□□ -0.6
THBS3-203ENST00000457183 FDPSP14324 419 aaKnown RBP11.27□□□□□ -0.61
THBS3-203ENST00000457183 CYP2C19P33261 490 aa11.27□□□□□ -0.61
THBS3-203ENST00000457183 ETF1P62495 437 aaKnown RBP11.27□□□□□ -0.61
THBS3-203ENST00000457183 NCAPHQ15003 741 aa11.27□□□□□ -0.61
THBS3-203ENST00000457183 SF3A1Q15459 793 aaKnown RBP11.27□□□□□ -0.61
THBS3-203ENST00000457183 GORABQ5T7V8 394 aa11.27□□□□□ -0.61
THBS3-203ENST00000457183 CLIC4Q9Y696 253 aa11.27□□□□□ -0.61
THBS3-203ENST00000457183 ANKRD31Q8N7Z5 1873 aa11.27□□□□□ -0.61
THBS3-203ENST00000457183 NRDCO43847 1150 aa11.27□□□□□ -0.61
THBS3-203ENST00000457183 TUBB4AP04350 444 aa11.27□□□□□ -0.61
THBS3-203ENST00000457183 PUM3Q15397 648 aaKnown RBP11.27□□□□□ -0.61
THBS3-203ENST00000457183 CREBRFQ8IUR6 639 aa11.27□□□□□ -0.61
THBS3-203ENST00000457183 PLCD3Q8N3E9 789 aa11.27□□□□□ -0.61
THBS3-203ENST00000457183 KBTBD3Q8NAB2 608 aa11.27□□□□□ -0.61
THBS3-203ENST00000457183 IPO4Q8TEX9 1081 aaKnown RBP11.27□□□□□ -0.61
THBS3-203ENST00000457183 CALCOCO1Q9P1Z2 691 aa11.27□□□□□ -0.61
THBS3-203ENST00000457183 DNAI1Q9UI46 699 aa11.27□□□□□ -0.61
THBS3-203ENST00000457183 TAF1P21675 1872 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 E7EWF7 191 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 ZRANB2O95218 330 aaKnown RBP eCLIP11.26□□□□□ -0.61
THBS3-203ENST00000457183 POLR3DP05423 398 aaPredicted RBP11.26□□□□□ -0.61
THBS3-203ENST00000457183 SLC3A2P08195 630 aaKnown RBP11.26□□□□□ -0.61
THBS3-203ENST00000457183 PLA2G4AP47712 749 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 RPS8P62241 208 aaKnown RBP11.26□□□□□ -0.61
THBS3-203ENST00000457183 STK38Q15208 465 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 OTUD7BQ6GQQ9 843 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 LPIN2Q92539 896 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 ZNF274Q96GC6 653 aaPredicted RBP11.26□□□□□ -0.61
THBS3-203ENST00000457183 BRIP1Q9BX63 1249 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 C10orf71Q711Q0 1435 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 CAPN2P17655 700 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 FGFR2P21802 821 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 LMOD1P29536 600 aaPredicted RBP11.26□□□□□ -0.61
THBS3-203ENST00000457183 TIMM10P62072 90 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 KCNG4Q8TDN1 519 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 UBXN4Q92575 508 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 ZNF512BQ96KM6 892 aaPredicted RBP11.26□□□□□ -0.61
THBS3-203ENST00000457183 NEUROD6Q96NK8 337 aa11.26□□□□□ -0.61
THBS3-203ENST00000457183 ORC3Q9UBD5 711 aaPredicted RBP11.26□□□□□ -0.61
THBS3-203ENST00000457183 FANCGO15287 622 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 ZNF202O95125 648 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 ATP1A3P13637 1013 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 HOXA10P31260 410 aaPredicted RBP11.25□□□□□ -0.61
THBS3-203ENST00000457183 NLRP12P59046 1061 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 TPM4P67936 248 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 DHX8Q14562 1220 aaKnown RBP11.25□□□□□ -0.61
THBS3-203ENST00000457183 CCDC158Q5M9N0 1113 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 DSCC1Q9BVC3 393 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 PHLPP2Q6ZVD8 1323 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 LAMA4Q16363 1823 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 GOLIM4O00461 696 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 SPTLC2O15270 562 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 YY1P25490 414 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 HNRNPH2P55795 449 aaKnown RBP11.25□□□□□ -0.61
THBS3-203ENST00000457183 FANCCQ00597 558 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 GRAPQ13588 217 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 TRIM65Q6PJ69 517 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 TMCO3Q6UWJ1 677 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 GRAPLQ8TC17 118 aaPredicted RBP11.25□□□□□ -0.61
THBS3-203ENST00000457183 XAGE2Q96GT9 111 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 RBM17Q96I25 401 aaKnown RBP11.25□□□□□ -0.61
THBS3-203ENST00000457183 ANKRD2Q9GZV1 360 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 HSD3B7Q9H2F3 369 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 POLR3EQ9NVU0 708 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 COL4A1P02462 1669 aa11.25□□□□□ -0.61
THBS3-203ENST00000457183 HSPD1P10809 573 aaKnown RBP11.24□□□□□ -0.61
THBS3-203ENST00000457183 SLC5A1P13866 664 aa11.24□□□□□ -0.61
THBS3-203ENST00000457183 YBX3P16989 372 aaKnown RBP eCLIP11.24□□□□□ -0.61
THBS3-203ENST00000457183 CHRNDQ07001 517 aa11.24□□□□□ -0.61
THBS3-203ENST00000457183 ISM2Q6H9L7 571 aa11.24□□□□□ -0.61
THBS3-203ENST00000457183 TMC4Q7Z404 712 aa11.24□□□□□ -0.61
THBS3-203ENST00000457183 RPGRQ92834 1020 aaKnown RBP11.24□□□□□ -0.61
THBS3-203ENST00000457183 CRAMP1Q96RY5 1269 aa11.24□□□□□ -0.61
THBS3-203ENST00000457183 HELLSQ9NRZ9 838 aa11.24□□□□□ -0.61
THBS3-203ENST00000457183 ARGLU1Q9NWB6 273 aaPredicted RBP11.24□□□□□ -0.61
THBS3-203ENST00000457183 CCP110O43303 1012 aa11.24□□□□□ -0.61
THBS3-203ENST00000457183 YEATS4O95619 227 aa11.24□□□□□ -0.61
THBS3-203ENST00000457183 PDE6BP35913 854 aa11.24□□□□□ -0.61
THBS3-203ENST00000457183 TGFB2P61812 414 aa11.24□□□□□ -0.61
THBS3-203ENST00000457183 CELF1Q92879 486 aaKnown RBP11.24□□□□□ -0.61
THBS3-203ENST00000457183 GPHNQ9NQX3 736 aaPredicted RBP11.24□□□□□ -0.61
THBS3-203ENST00000457183 KIF13BQ9NQT8 1826 aa11.23□□□□□ -0.61
THBS3-203ENST00000457183 DPEP1P16444 411 aa11.23□□□□□ -0.61
THBS3-203ENST00000457183 UBE4AQ14139 1066 aa11.23□□□□□ -0.61
THBS3-203ENST00000457183 MNS1Q8NEH6 495 aa11.23□□□□□ -0.61
THBS3-203ENST00000457183 C8orf76Q96K31 380 aa11.23□□□□□ -0.61
THBS3-203ENST00000457183 PAG1Q9NWQ8 432 aa11.23□□□□□ -0.61
THBS3-203ENST00000457183 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.23□□□□□ -0.61
THBS3-203ENST00000457183 MINPP1Q9UNW1 487 aa11.23□□□□□ -0.61
THBS3-203ENST00000457183 TULP2O00295 520 aa11.23□□□□□ -0.61
THBS3-203ENST00000457183 IKBKBO14920 756 aa11.23□□□□□ -0.61
THBS3-203ENST00000457183 POLR3GO15318 223 aaPredicted RBP11.23□□□□□ -0.61
THBS3-203ENST00000457183 GRIN3BO60391 1043 aa11.23□□□□□ -0.61
THBS3-203ENST00000457183 BBOX1O75936 387 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms