RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 EPB41L4AQ9HCS5 686 aaPredicted RBP20.29■□□□□ 0.84
PTPN6-204ENST00000456013 ARGLU1Q9NWB6 273 aaPredicted RBP20.29■□□□□ 0.84
PTPN6-204ENST00000456013 GOLGA6L9A6NEM1 432 aa20.29■□□□□ 0.84
PTPN6-204ENST00000456013 BTBD18B2RXH4 712 aa20.29■□□□□ 0.84
PTPN6-204ENST00000456013 STX10O60499 249 aa20.29■□□□□ 0.84
PTPN6-204ENST00000456013 STARD3NLO95772 234 aa20.29■□□□□ 0.84
PTPN6-204ENST00000456013 ZNF18P17022 549 aa20.29■□□□□ 0.84
PTPN6-204ENST00000456013 GPTP24298 496 aa20.29■□□□□ 0.84
PTPN6-204ENST00000456013 SARSP49591 514 aaKnown RBP20.29■□□□□ 0.84
PTPN6-204ENST00000456013 CREBRFQ8IUR6 639 aa20.29■□□□□ 0.84
PTPN6-204ENST00000456013 MLKLQ8NB16 471 aa20.29■□□□□ 0.84
PTPN6-204ENST00000456013 ENOX1Q8TC92 643 aaKnown RBP20.29■□□□□ 0.84
PTPN6-204ENST00000456013 NAPBQ9H115 298 aa20.29■□□□□ 0.84
PTPN6-204ENST00000456013 DACH1Q9UI36 760 aa20.29■□□□□ 0.84
PTPN6-204ENST00000456013 FBXO2Q9UK22 296 aaPredicted RBP20.29■□□□□ 0.84
PTPN6-204ENST00000456013 ZRANB2O95218 330 aaKnown RBP eCLIP20.28■□□□□ 0.84
PTPN6-204ENST00000456013 TPM1P09493 284 aa20.28■□□□□ 0.84
PTPN6-204ENST00000456013 CTDSPL2Q05D32 466 aa20.28■□□□□ 0.84
PTPN6-204ENST00000456013 PTPN21Q16825 1174 aa20.28■□□□□ 0.84
PTPN6-204ENST00000456013 SPECC1Q5M775 1068 aa20.28■□□□□ 0.84
PTPN6-204ENST00000456013 DIS3L2Q8IYB7 885 aaKnown RBP20.28■□□□□ 0.84
PTPN6-204ENST00000456013 BAG1Q99933 345 aaPredicted RBP20.28■□□□□ 0.84
PTPN6-204ENST00000456013 KRT23Q9C075 422 aa20.28■□□□□ 0.84
PTPN6-204ENST00000456013 FOXP1Q9H334 677 aaPredicted RBP20.28■□□□□ 0.84
PTPN6-204ENST00000456013 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.28■□□□□ 0.84
PTPN6-204ENST00000456013 IRS4O14654 1257 aaPredicted RBP20.28■□□□□ 0.84
PTPN6-204ENST00000456013 PNMA6AP0CW24 399 aaPredicted RBP20.28■□□□□ 0.84
PTPN6-204ENST00000456013 RILPL1Q5EBL4 403 aa20.28■□□□□ 0.84
PTPN6-204ENST00000456013 TACC3Q9Y6A5 838 aa20.28■□□□□ 0.84
PTPN6-204ENST00000456013 NUP98P52948 1817 aa20.27■□□□□ 0.84
PTPN6-204ENST00000456013 GUCY1A2P33402 732 aa20.27■□□□□ 0.84
PTPN6-204ENST00000456013 MORC3Q14149 939 aa20.27■□□□□ 0.84
PTPN6-204ENST00000456013 AKNAD1Q5T1N1 836 aa20.27■□□□□ 0.84
PTPN6-204ENST00000456013 TRIML1Q8N9V2 468 aa20.27■□□□□ 0.84
PTPN6-204ENST00000456013 ZNF579Q8NAF0 562 aaKnown RBP20.27■□□□□ 0.84
PTPN6-204ENST00000456013 LPIN2Q92539 896 aa20.27■□□□□ 0.84
PTPN6-204ENST00000456013 NOL10Q9BSC4 688 aaKnown RBP20.27■□□□□ 0.84
PTPN6-204ENST00000456013 CARD6Q9BX69 1037 aa20.27■□□□□ 0.84
PTPN6-204ENST00000456013 ASAP1Q9ULH1 1129 aa20.27■□□□□ 0.84
PTPN6-204ENST00000456013 NFE2L3Q9Y4A8 694 aa20.27■□□□□ 0.84
PTPN6-204ENST00000456013 FGFR2P21802 821 aa20.27■□□□□ 0.83
PTPN6-204ENST00000456013 SPECC1LQ69YQ0 1117 aa20.27■□□□□ 0.83
PTPN6-204ENST00000456013 TRIM22Q8IYM9 498 aa20.27■□□□□ 0.83
PTPN6-204ENST00000456013 TC2NQ8N9U0 490 aa20.27■□□□□ 0.83
PTPN6-204ENST00000456013 ST7Q9NRC1 585 aa20.27■□□□□ 0.83
PTPN6-204ENST00000456013 SERTAD1Q9UHV2 236 aa20.27■□□□□ 0.83
PTPN6-204ENST00000456013 POLR2DO15514 142 aaKnown RBP20.26■□□□□ 0.83
PTPN6-204ENST00000456013 LRP5O75197 1615 aa20.26■□□□□ 0.83
PTPN6-204ENST00000456013 PRR29P0C7W0 189 aa20.26■□□□□ 0.83
PTPN6-204ENST00000456013 GRIN1Q05586 938 aa20.26■□□□□ 0.83
PTPN6-204ENST00000456013 FMR1Q06787 632 aaKnown RBP eCLIP20.26■□□□□ 0.83
PTPN6-204ENST00000456013 PUM3Q15397 648 aaKnown RBP20.26■□□□□ 0.83
PTPN6-204ENST00000456013 TMCO3Q6UWJ1 677 aa20.26■□□□□ 0.83
PTPN6-204ENST00000456013 SMARCE1Q969G3 411 aa20.26■□□□□ 0.83
PTPN6-204ENST00000456013 PDE8AO60658 829 aa20.26■□□□□ 0.83
PTPN6-204ENST00000456013 MBD4O95243 580 aa20.26■□□□□ 0.83
PTPN6-204ENST00000456013 CDK11BP21127 795 aaKnown RBP20.26■□□□□ 0.83
PTPN6-204ENST00000456013 KCNJ14Q9UNX9 436 aa20.26■□□□□ 0.83
PTPN6-204ENST00000456013 MYH6P13533 1939 aa20.25■□□□□ 0.83
PTPN6-204ENST00000456013 MAP3K12Q12852 859 aa20.25■□□□□ 0.83
PTPN6-204ENST00000456013 RTN1Q16799 776 aa20.25■□□□□ 0.83
PTPN6-204ENST00000456013 KANK3Q6NY19 840 aa20.25■□□□□ 0.83
PTPN6-204ENST00000456013 MFSD6Q6ZSS7 791 aa20.25■□□□□ 0.83
PTPN6-204ENST00000456013 MAGEB6Q8N7X4 407 aa20.25■□□□□ 0.83
PTPN6-204ENST00000456013 PDILTQ8N807 584 aa20.25■□□□□ 0.83
PTPN6-204ENST00000456013 SPATA5Q8NB90 893 aa20.25■□□□□ 0.83
PTPN6-204ENST00000456013 ITGB4P16144 1822 aa20.25■□□□□ 0.83
PTPN6-204ENST00000456013 BCORQ6W2J9 1755 aa20.25■□□□□ 0.83
PTPN6-204ENST00000456013 MROH5Q6ZUA9 1318 aa20.24■□□□□ 0.83
PTPN6-204ENST00000456013 GSG1L2A8MUP6 293 aa20.24■□□□□ 0.83
PTPN6-204ENST00000456013 CASQ1P31415 396 aa20.24■□□□□ 0.83
PTPN6-204ENST00000456013 PLA2G4AP47712 749 aa20.24■□□□□ 0.83
PTPN6-204ENST00000456013 MAP3K9P80192 1104 aa20.24■□□□□ 0.83
PTPN6-204ENST00000456013 HSP90AA4PQ58FG1 418 aa20.24■□□□□ 0.83
PTPN6-204ENST00000456013 NUTM2AQ8IVF1 878 aaPredicted RBP20.24■□□□□ 0.83
PTPN6-204ENST00000456013 PIGBQ92521 554 aa20.24■□□□□ 0.83
PTPN6-204ENST00000456013 MTA3Q9BTC8 594 aa20.24■□□□□ 0.83
PTPN6-204ENST00000456013 TRMT112Q9UI30 125 aaKnown RBP20.24■□□□□ 0.83
PTPN6-204ENST00000456013 SRPRBQ9Y5M8 271 aaKnown RBP20.24■□□□□ 0.83
PTPN6-204ENST00000456013 DEXIO95424 95 aa20.24■□□□□ 0.83
PTPN6-204ENST00000456013 STAG1Q8WVM7 1258 aa20.24■□□□□ 0.83
PTPN6-204ENST00000456013 ATP8B1O43520 1251 aa20.23■□□□□ 0.83
PTPN6-204ENST00000456013 WTAPQ15007 396 aa20.23■□□□□ 0.83
PTPN6-204ENST00000456013 SART3Q15020 963 aaKnown RBP20.23■□□□□ 0.83
PTPN6-204ENST00000456013 SPATA20Q8TB22 786 aa20.23■□□□□ 0.83
PTPN6-204ENST00000456013 ARMT1Q9H993 441 aa20.23■□□□□ 0.83
PTPN6-204ENST00000456013 CEP131Q9UPN4 1083 aa20.23■□□□□ 0.83
PTPN6-204ENST00000456013 PCDHB6Q9Y5E3 794 aa20.23■□□□□ 0.83
PTPN6-204ENST00000456013 ACTN4O43707 911 aaKnown RBP20.23■□□□□ 0.83
PTPN6-204ENST00000456013 ADKP55263 362 aaKnown RBP20.23■□□□□ 0.83
PTPN6-204ENST00000456013 GNG11P61952 73 aa20.23■□□□□ 0.83
PTPN6-204ENST00000456013 FAM177A1Q8N128 213 aaPredicted RBP20.23■□□□□ 0.83
PTPN6-204ENST00000456013 CRACR2BQ8N4Y2 399 aaPredicted RBP20.23■□□□□ 0.83
PTPN6-204ENST00000456013 WDR24Q96S15 920 aa20.23■□□□□ 0.83
PTPN6-204ENST00000456013 RAI14Q9P0K7 980 aa20.23■□□□□ 0.83
PTPN6-204ENST00000456013 CCDC196A0A1B0GTZ2 297 aa20.22■□□□□ 0.83
PTPN6-204ENST00000456013 ERCC5P28715 1186 aaPredicted RBP20.22■□□□□ 0.83
PTPN6-204ENST00000456013 RCAN1P53805 252 aa20.22■□□□□ 0.83
PTPN6-204ENST00000456013 NR1I3Q14994 352 aa20.22■□□□□ 0.83
PTPN6-204ENST00000456013 TOGARAM2Q6ZUX3 1019 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms