RNA–Protein interactions for RNA: ENST00000451728.6

CNBP-204, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

TSL 1 (best) BASIC

Gene CNBP, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-204ENST00000451728 ZNF287Q9HBT7 754 aa16.5■□□□□ 0.23
CNBP-204ENST00000451728 DDX4Q9NQI0 724 aaKnown RBP16.5■□□□□ 0.23
CNBP-204ENST00000451728 SMC3Q9UQE7 1217 aa16.5■□□□□ 0.23
CNBP-204ENST00000451728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.5■□□□□ 0.23
CNBP-204ENST00000451728 KLF18A0A0U1RQI7 1052 aa16.49■□□□□ 0.23
CNBP-204ENST00000451728 FZD9O00144 591 aa16.49■□□□□ 0.23
CNBP-204ENST00000451728 PFKFB2O60825 505 aa16.49■□□□□ 0.23
CNBP-204ENST00000451728 PDIA3P30101 505 aaKnown RBP16.49■□□□□ 0.23
CNBP-204ENST00000451728 EVCP57679 992 aa16.49■□□□□ 0.23
CNBP-204ENST00000451728 NFXL1Q6ZNB6 911 aa16.49■□□□□ 0.23
CNBP-204ENST00000451728 PRMT6Q96LA8 375 aaPredicted RBP16.49■□□□□ 0.23
CNBP-204ENST00000451728 OSBPL5Q9H0X9 879 aaPredicted RBP16.49■□□□□ 0.23
CNBP-204ENST00000451728 TDRD3Q9H7E2 651 aaKnown RBP16.49■□□□□ 0.23
CNBP-204ENST00000451728 NAV1Q8NEY1 1877 aa16.49■□□□□ 0.23
CNBP-204ENST00000451728 ADAMTSL1Q8N6G6 1762 aa16.49■□□□□ 0.23
CNBP-204ENST00000451728 LMNB1P20700 586 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 RPS12P25398 132 aaKnown RBP16.48■□□□□ 0.23
CNBP-204ENST00000451728 LIFRP42702 1097 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 NT5C2P49902 561 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 ST3GAL1Q11201 340 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 IQCA1Q86XH1 822 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 ZNF444Q8N0Y2 327 aaPredicted RBP16.48■□□□□ 0.23
CNBP-204ENST00000451728 TMTC2Q8N394 836 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 GTF3C6Q969F1 213 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 CHMP4CQ96CF2 233 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 IDI2Q9BXS1 227 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 LAMB1P07942 1786 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 ROBO3Q96MS0 1386 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 TSPY2A6NKD2 308 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 MMP14P50281 582 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 CACNB3P54284 484 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 SCRN1Q12765 414 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 NFIAQ12857 509 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 WTAPQ15007 396 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 LY9Q9HBG7 655 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 TMOD2Q9NZR1 351 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 BRPF3Q9ULD4 1205 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 GJA3Q9Y6H8 435 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 CDK5RAP2Q96SN8 1893 aa16.48■□□□□ 0.23
CNBP-204ENST00000451728 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
CNBP-204ENST00000451728 HLA-DOAP06340 250 aa16.47■□□□□ 0.23
CNBP-204ENST00000451728 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
CNBP-204ENST00000451728 CCT2P78371 535 aaKnown RBP16.47■□□□□ 0.23
CNBP-204ENST00000451728 NUCB2P80303 420 aa16.47■□□□□ 0.23
CNBP-204ENST00000451728 TCP10Q12799 353 aa16.47■□□□□ 0.23
CNBP-204ENST00000451728 FAM47AQ5JRC9 791 aa16.47■□□□□ 0.23
CNBP-204ENST00000451728 SYNE3Q6ZMZ3 975 aa16.47■□□□□ 0.23
CNBP-204ENST00000451728 C16orf86Q6ZW13 317 aa16.47■□□□□ 0.23
CNBP-204ENST00000451728 ZSCAN10Q96SZ4 725 aaPredicted RBP16.47■□□□□ 0.23
CNBP-204ENST00000451728 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
CNBP-204ENST00000451728 GJB2P29033 226 aa16.46■□□□□ 0.23
CNBP-204ENST00000451728 CDK8P49336 464 aa16.46■□□□□ 0.23
CNBP-204ENST00000451728 TFAP4Q01664 338 aa16.46■□□□□ 0.23
CNBP-204ENST00000451728 SGMS1Q86VZ5 419 aa16.46■□□□□ 0.23
CNBP-204ENST00000451728 MTMR14Q8NCE2 650 aa16.46■□□□□ 0.23
CNBP-204ENST00000451728 DHX36Q9H2U1 1008 aaKnown RBP16.46■□□□□ 0.23
CNBP-204ENST00000451728 SENP2Q9HC62 589 aa16.46■□□□□ 0.23
CNBP-204ENST00000451728 FAM198AQ9UFP1 575 aa16.46■□□□□ 0.23
CNBP-204ENST00000451728 TNKSO95271 1327 aa16.46■□□□□ 0.23
CNBP-204ENST00000451728 FOCADQ5VW36 1801 aa16.46■□□□□ 0.22
CNBP-204ENST00000451728 GOLGA8BA8MQT2 603 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 ZFPM1Q8IX07 1006 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 SLC44A5Q8NCS7 719 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 DPF2Q92785 391 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 SLC12A7Q9Y666 1083 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 MYH1P12882 1939 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 GOLGB1Q14789 3259 aaKnown RBP16.45■□□□□ 0.22
CNBP-204ENST00000451728 MYO1BO43795 1136 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
CNBP-204ENST00000451728 ENTPD3O75355 529 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
CNBP-204ENST00000451728 SEC23AQ15436 765 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 ZSCAN29Q8IWY8 852 aaPredicted RBP16.45■□□□□ 0.22
CNBP-204ENST00000451728 LLPHQ9BRT6 129 aaKnown RBP16.45■□□□□ 0.22
CNBP-204ENST00000451728 MYOZ2Q9NPC6 264 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 ZNF70Q9UC06 446 aaPredicted RBP16.45■□□□□ 0.22
CNBP-204ENST00000451728 SERPINB13Q9UIV8 391 aa16.45■□□□□ 0.22
CNBP-204ENST00000451728 CLRN2A0PK11 232 aa16.44■□□□□ 0.22
CNBP-204ENST00000451728 ZBTB43O43298 467 aa16.44■□□□□ 0.22
CNBP-204ENST00000451728 YBX3P16989 372 aaKnown RBP eCLIP16.44■□□□□ 0.221e-9■■□□□ 12.4
CNBP-204ENST00000451728 RASA1P20936 1047 aa16.44■□□□□ 0.22
CNBP-204ENST00000451728 METAP2P50579 478 aaKnown RBP eCLIP16.44■□□□□ 0.22
CNBP-204ENST00000451728 CCDC178Q5BJE1 867 aa16.44■□□□□ 0.22
CNBP-204ENST00000451728 IFIT1BQ5T764 474 aaKnown RBP16.44■□□□□ 0.22
CNBP-204ENST00000451728 APOA5Q6Q788 366 aa16.44■□□□□ 0.22
CNBP-204ENST00000451728 RAB11FIP4Q86YS3 637 aa16.44■□□□□ 0.22
CNBP-204ENST00000451728 NCOA5Q9HCD5 579 aaKnown RBP16.44■□□□□ 0.22
CNBP-204ENST00000451728 DDX60LQ5H9U9 1706 aaKnown RBP16.44■□□□□ 0.22
CNBP-204ENST00000451728 ECM29Q5VYK3 1845 aa16.43■□□□□ 0.22
CNBP-204ENST00000451728 TCP10L2B9ZVM9 353 aa16.43■□□□□ 0.22
CNBP-204ENST00000451728 ZNF280AP59817 542 aaPredicted RBP16.43■□□□□ 0.22
CNBP-204ENST00000451728 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
CNBP-204ENST00000451728 SPDYE2Q495Y8 402 aa16.43■□□□□ 0.22
CNBP-204ENST00000451728 RBM26Q5T8P6 1007 aaKnown RBP16.43■□□□□ 0.22
CNBP-204ENST00000451728 ENAHQ8N8S7 591 aaPredicted RBP16.43■□□□□ 0.22
CNBP-204ENST00000451728 PI4KBQ9UBF8 816 aa16.43■□□□□ 0.22
CNBP-204ENST00000451728 SWAP70Q9UH65 585 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms