RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 KIF23Q02241 960 aaPredicted RBP10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 CRYMQ14894 314 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 CCDC40Q4G0X9 1142 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 CCNI2Q6ZMN8 369 aaPredicted RBP10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 CAPZA3Q96KX2 299 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 GUCA1BQ9UMX6 200 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 A6NNZ2 444 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 OPA1O60313 960 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 ZEB2O60315 1214 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 CLNS1AP54105 237 aaKnown RBP10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 PDCLQ13371 301 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 TUBB8Q3ZCM7 444 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 CNGA4Q8IV77 575 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 EYA1Q99502 592 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 SH3GL2Q99962 352 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 WWC3Q9ULE0 1092 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 ZNF609O15014 1411 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 A0A1B0GUA9 196 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 E7EWF7 191 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 PPP6R2O75170 966 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 MYBL2P10244 700 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 NBPF14Q5TI25 921 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 TMTC1Q8IUR5 882 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 RUFY1Q96T51 708 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 SLF1Q9BQI6 1058 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 NBPF3Q9H094 633 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 HDAC6Q9UBN7 1215 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 SMTNP53814 917 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 RESP18Q5W5W9 173 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 SND1Q7KZF4 910 aaKnown RBP eCLIP10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 CAGE1Q8TC20 777 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 ANKRD24Q8TF21 1146 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 SAR1BQ9Y6B6 198 aa10.64□□□□□ -0.71
SYNPO2-204ENST00000448416 MYO5BQ9ULV0 1848 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 IRX1P78414 480 aaPredicted RBP10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 CWF19L2Q2TBE0 894 aaKnown RBP10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 FILIP1LQ4L180 1135 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 WLSQ5T9L3 541 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 TRAPPC11Q7Z392 1133 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 FRMD3A2A2Y4 597 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 SRGAP2O75044 1071 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 NBPF20Q3BBV1 942 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 SLC9C2Q5TAH2 1124 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 RAB11FIP4Q86YS3 637 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 KLHDC4Q8TBB5 520 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 HINFPQ9BQA5 517 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 MAP3K2Q9Y2U5 619 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 EZRP15311 586 aaKnown RBP10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 MRPL12P52815 198 aaKnown RBP10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 POSTNQ15063 836 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 CCDC70Q6NSX1 233 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 DDX46Q7L014 1031 aaKnown RBP10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 RPGRIP1Q96KN7 1286 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 GPHNQ9NQX3 736 aaPredicted RBP10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 BABAM1Q9NWV8 329 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 FAM184BQ9ULE4 1060 aa10.63□□□□□ -0.71
SYNPO2-204ENST00000448416 ATP5JP18859 108 aa10.62□□□□□ -0.71
SYNPO2-204ENST00000448416 FXR1P51114 621 aaKnown RBP eCLIP10.62□□□□□ -0.71
SYNPO2-204ENST00000448416 CKAP4Q07065 602 aaKnown RBP10.62□□□□□ -0.71
SYNPO2-204ENST00000448416 CCDC51Q96ER9 411 aa10.62□□□□□ -0.71
SYNPO2-204ENST00000448416 SUCLG2Q96I99 432 aa10.62□□□□□ -0.71
SYNPO2-204ENST00000448416 NCAPD2Q15021 1401 aa10.62□□□□□ -0.71
SYNPO2-204ENST00000448416 ATP1A2P50993 1020 aa10.62□□□□□ -0.71
SYNPO2-204ENST00000448416 SF3B2Q13435 895 aaKnown RBP10.62□□□□□ -0.71
SYNPO2-204ENST00000448416 SPECC1Q5M775 1068 aa10.62□□□□□ -0.71
SYNPO2-204ENST00000448416 VCPKMTQ9H867 229 aa10.62□□□□□ -0.71
SYNPO2-204ENST00000448416 A0A0G2JLW4 131 aa10.62□□□□□ -0.71
SYNPO2-204ENST00000448416 KLHL10Q6JEL2 608 aa10.62□□□□□ -0.71
SYNPO2-204ENST00000448416 FAM237AA0A1B0GTK4 181 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 ERVK-24P63145 666 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 SKOR1P84550 965 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 NAA25Q14CX7 972 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 SNCBQ16143 134 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 CYP26C1Q6V0L0 522 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 SLC40A1Q9NP59 571 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 KLF18A0A0U1RQI7 1052 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 GOLGA8BA8MQT2 603 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 STX17P56962 302 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 C11orf91Q3C1V1 193 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 TTC39AQ5SRH9 613 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 YTHDF3Q7Z739 585 aaKnown RBP10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 CCDC13Q8IYE1 715 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 CCDC114Q96M63 670 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 MED15Q96RN5 788 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 TRIM10Q9UDY6 481 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 DDX20Q9UHI6 824 aaKnown RBP10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 RASSF9O75901 435 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 GYPCP04921 128 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 ATP1A1P05023 1023 aaKnown RBP10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 SSBP05455 408 aaKnown RBP eCLIP10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 NAP1L1P55209 391 aaKnown RBP10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 IFT88Q13099 833 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 PTPAQ15257 358 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 TXNDC2Q86VQ3 553 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 VPS37DQ86XT2 251 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 ARL8AQ96BM9 186 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 SCLT1Q96NL6 688 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 LAMA4Q16363 1823 aa10.61□□□□□ -0.71
SYNPO2-204ENST00000448416 MDM2Q00987 491 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms