RNA–Protein interactions for RNA: ENST00000446936.6

CNBP-203, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNBP, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-203ENST00000446936 ZKSCAN3Q9BRR0 538 aa16.5■□□□□ 0.23
CNBP-203ENST00000446936 UBAC1Q9BSL1 405 aa16.5■□□□□ 0.23
CNBP-203ENST00000446936 MTA3Q9BTC8 594 aa16.5■□□□□ 0.23
CNBP-203ENST00000446936 ZNF287Q9HBT7 754 aa16.5■□□□□ 0.23
CNBP-203ENST00000446936 DDX4Q9NQI0 724 aaKnown RBP16.5■□□□□ 0.23
CNBP-203ENST00000446936 SMC3Q9UQE7 1217 aa16.5■□□□□ 0.23
CNBP-203ENST00000446936 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.5■□□□□ 0.23
CNBP-203ENST00000446936 KLF18A0A0U1RQI7 1052 aa16.49■□□□□ 0.23
CNBP-203ENST00000446936 FZD9O00144 591 aa16.49■□□□□ 0.23
CNBP-203ENST00000446936 PFKFB2O60825 505 aa16.49■□□□□ 0.23
CNBP-203ENST00000446936 PDIA3P30101 505 aaKnown RBP16.49■□□□□ 0.23
CNBP-203ENST00000446936 EVCP57679 992 aa16.49■□□□□ 0.23
CNBP-203ENST00000446936 NFXL1Q6ZNB6 911 aa16.49■□□□□ 0.23
CNBP-203ENST00000446936 PRMT6Q96LA8 375 aaPredicted RBP16.49■□□□□ 0.23
CNBP-203ENST00000446936 OSBPL5Q9H0X9 879 aaPredicted RBP16.49■□□□□ 0.23
CNBP-203ENST00000446936 TDRD3Q9H7E2 651 aaKnown RBP16.49■□□□□ 0.23
CNBP-203ENST00000446936 NAV1Q8NEY1 1877 aa16.49■□□□□ 0.23
CNBP-203ENST00000446936 ADAMTSL1Q8N6G6 1762 aa16.49■□□□□ 0.23
CNBP-203ENST00000446936 LMNB1P20700 586 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 RPS12P25398 132 aaKnown RBP16.48■□□□□ 0.23
CNBP-203ENST00000446936 LIFRP42702 1097 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 NT5C2P49902 561 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 ST3GAL1Q11201 340 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 GPR162Q16538 588 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 IQCA1Q86XH1 822 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 ZNF444Q8N0Y2 327 aaPredicted RBP16.48■□□□□ 0.23
CNBP-203ENST00000446936 TMTC2Q8N394 836 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 GTF3C6Q969F1 213 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 CHMP4CQ96CF2 233 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 IDI2Q9BXS1 227 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 LAMB1P07942 1786 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 ROBO3Q96MS0 1386 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 CCDC69A6NI79 296 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 TSPY2A6NKD2 308 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 MMP14P50281 582 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 CACNB3P54284 484 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 SCRN1Q12765 414 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 NFIAQ12857 509 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 WTAPQ15007 396 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 LY9Q9HBG7 655 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 TMOD2Q9NZR1 351 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 BRPF3Q9ULD4 1205 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 GJA3Q9Y6H8 435 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 CDK5RAP2Q96SN8 1893 aa16.48■□□□□ 0.23
CNBP-203ENST00000446936 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
CNBP-203ENST00000446936 HLA-DOAP06340 250 aa16.47■□□□□ 0.23
CNBP-203ENST00000446936 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
CNBP-203ENST00000446936 CCT2P78371 535 aaKnown RBP16.47■□□□□ 0.23
CNBP-203ENST00000446936 NUCB2P80303 420 aa16.47■□□□□ 0.23
CNBP-203ENST00000446936 TCP10Q12799 353 aa16.47■□□□□ 0.23
CNBP-203ENST00000446936 FAM47AQ5JRC9 791 aa16.47■□□□□ 0.23
CNBP-203ENST00000446936 SYNE3Q6ZMZ3 975 aa16.47■□□□□ 0.23
CNBP-203ENST00000446936 C16orf86Q6ZW13 317 aa16.47■□□□□ 0.23
CNBP-203ENST00000446936 ZSCAN10Q96SZ4 725 aaPredicted RBP16.47■□□□□ 0.23
CNBP-203ENST00000446936 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
CNBP-203ENST00000446936 GJB2P29033 226 aa16.46■□□□□ 0.23
CNBP-203ENST00000446936 CDK8P49336 464 aa16.46■□□□□ 0.23
CNBP-203ENST00000446936 TFAP4Q01664 338 aa16.46■□□□□ 0.23
CNBP-203ENST00000446936 SGMS1Q86VZ5 419 aa16.46■□□□□ 0.23
CNBP-203ENST00000446936 MTMR14Q8NCE2 650 aa16.46■□□□□ 0.23
CNBP-203ENST00000446936 DHX36Q9H2U1 1008 aaKnown RBP16.46■□□□□ 0.23
CNBP-203ENST00000446936 SENP2Q9HC62 589 aa16.46■□□□□ 0.23
CNBP-203ENST00000446936 FAM198AQ9UFP1 575 aa16.46■□□□□ 0.23
CNBP-203ENST00000446936 TNKSO95271 1327 aa16.46■□□□□ 0.23
CNBP-203ENST00000446936 FOCADQ5VW36 1801 aa16.46■□□□□ 0.22
CNBP-203ENST00000446936 GOLGA8BA8MQT2 603 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 ZFPM1Q8IX07 1006 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 SLC44A5Q8NCS7 719 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 DPF2Q92785 391 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 SLC12A7Q9Y666 1083 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 MYH1P12882 1939 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 GOLGB1Q14789 3259 aaKnown RBP16.45■□□□□ 0.22
CNBP-203ENST00000446936 MYO1BO43795 1136 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
CNBP-203ENST00000446936 GRIN3BO60391 1043 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 ENTPD3O75355 529 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
CNBP-203ENST00000446936 SEC23AQ15436 765 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 ZSCAN29Q8IWY8 852 aaPredicted RBP16.45■□□□□ 0.22
CNBP-203ENST00000446936 LLPHQ9BRT6 129 aaKnown RBP16.45■□□□□ 0.22
CNBP-203ENST00000446936 MYOZ2Q9NPC6 264 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 ZNF70Q9UC06 446 aaPredicted RBP16.45■□□□□ 0.22
CNBP-203ENST00000446936 SERPINB13Q9UIV8 391 aa16.45■□□□□ 0.22
CNBP-203ENST00000446936 CLRN2A0PK11 232 aa16.44■□□□□ 0.22
CNBP-203ENST00000446936 ZBTB43O43298 467 aa16.44■□□□□ 0.22
CNBP-203ENST00000446936 YBX3P16989 372 aaKnown RBP eCLIP16.44■□□□□ 0.221e-9■■□□□ 12.4
CNBP-203ENST00000446936 RASA1P20936 1047 aa16.44■□□□□ 0.22
CNBP-203ENST00000446936 METAP2P50579 478 aaKnown RBP eCLIP16.44■□□□□ 0.22
CNBP-203ENST00000446936 CCDC178Q5BJE1 867 aa16.44■□□□□ 0.22
CNBP-203ENST00000446936 IFIT1BQ5T764 474 aaKnown RBP16.44■□□□□ 0.22
CNBP-203ENST00000446936 APOA5Q6Q788 366 aa16.44■□□□□ 0.22
CNBP-203ENST00000446936 RAB11FIP4Q86YS3 637 aa16.44■□□□□ 0.22
CNBP-203ENST00000446936 NCOA5Q9HCD5 579 aaKnown RBP16.44■□□□□ 0.22
CNBP-203ENST00000446936 DDX60LQ5H9U9 1706 aaKnown RBP16.44■□□□□ 0.22
CNBP-203ENST00000446936 ECM29Q5VYK3 1845 aa16.43■□□□□ 0.22
CNBP-203ENST00000446936 TCP10L2B9ZVM9 353 aa16.43■□□□□ 0.22
CNBP-203ENST00000446936 ZNF280AP59817 542 aaPredicted RBP16.43■□□□□ 0.22
CNBP-203ENST00000446936 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms