RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 GPR162Q16538 588 aa25.14■■□□□ 1.61
CDKN1C-204ENST00000440480 CHST3Q7LGC8 479 aa25.14■■□□□ 1.61
CDKN1C-204ENST00000440480 SAP30BPQ9UHR5 308 aaKnown RBP25.14■■□□□ 1.61
CDKN1C-204ENST00000440480 CYP2D6P10635 497 aa25.13■■□□□ 1.61
CDKN1C-204ENST00000440480 PCP11498 1178 aaKnown RBP25.13■■□□□ 1.61
CDKN1C-204ENST00000440480 SLC4A8Q2Y0W8 1093 aa25.13■■□□□ 1.61
CDKN1C-204ENST00000440480 Q6ZUG5 572 aa25.13■■□□□ 1.61
CDKN1C-204ENST00000440480 MB21D2Q8IYB1 491 aaPredicted RBP25.13■■□□□ 1.61
CDKN1C-204ENST00000440480 B4E1Z4 1266 aa25.12■■□□□ 1.61
CDKN1C-204ENST00000440480 SMIM22K7EJ46 135 aa25.12■■□□□ 1.61
CDKN1C-204ENST00000440480 CSPP1Q1MSJ5 1256 aa25.12■■□□□ 1.61
CDKN1C-204ENST00000440480 RRP12Q5JTH9 1297 aaKnown RBP25.12■■□□□ 1.61
CDKN1C-204ENST00000440480 NEDD4P46934 1319 aa25.12■■□□□ 1.61
CDKN1C-204ENST00000440480 SPDYE2BA6NHP3 402 aa25.12■■□□□ 1.61
CDKN1C-204ENST00000440480 SPDYE6P0CI01 402 aa25.12■■□□□ 1.61
CDKN1C-204ENST00000440480 PDE4BQ07343 736 aa25.12■■□□□ 1.61
CDKN1C-204ENST00000440480 DPF2Q92785 391 aa25.12■■□□□ 1.61
CDKN1C-204ENST00000440480 LRRC2Q9BYS8 371 aa25.12■■□□□ 1.61
CDKN1C-204ENST00000440480 TDRD3Q9H7E2 651 aaKnown RBP25.12■■□□□ 1.61
CDKN1C-204ENST00000440480 TACC3Q9Y6A5 838 aa25.12■■□□□ 1.61
CDKN1C-204ENST00000440480 PRC1O43663 620 aa25.11■■□□□ 1.61
CDKN1C-204ENST00000440480 F13A1P00488 732 aa25.11■■□□□ 1.61
CDKN1C-204ENST00000440480 NECAB1Q8N987 351 aa25.11■■□□□ 1.61
CDKN1C-204ENST00000440480 DDX4Q9NQI0 724 aaKnown RBP25.11■■□□□ 1.61
CDKN1C-204ENST00000440480 KDM4AO75164 1064 aa25.1■■□□□ 1.61
CDKN1C-204ENST00000440480 FGRP09769 529 aa25.1■■□□□ 1.61
CDKN1C-204ENST00000440480 PLCD1P51178 756 aa25.1■■□□□ 1.61
CDKN1C-204ENST00000440480 MTMR14Q8NCE2 650 aa25.1■■□□□ 1.61
CDKN1C-204ENST00000440480 IDI2Q9BXS1 227 aa25.1■■□□□ 1.61
CDKN1C-204ENST00000440480 ZSWIM5Q9P217 1185 aa25.1■■□□□ 1.61
CDKN1C-204ENST00000440480 GMPSP49915 693 aaPredicted RBP25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 CACNB3P54284 484 aa25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 EVX2Q03828 476 aa25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 NFIAQ12857 509 aa25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 ESR2Q92731 530 aa25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 RNF181Q9P0P0 153 aa25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 ZNF646O15015 1829 aaPredicted RBP25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 WDR19Q8NEZ3 1342 aa25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 ZNF541Q9H0D2 1346 aa25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 LARP1BQ659C4 914 aaKnown RBP25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 TTC6Q86TZ1 520 aa25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 FBXL16Q8N461 479 aa25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 SYAP1Q96A49 352 aaPredicted RBP25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 OSBPL5Q9H0X9 879 aaPredicted RBP25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 GRPEL1Q9HAV7 217 aa25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 MYOZ2Q9NPC6 264 aa25.09■■□□□ 1.61
CDKN1C-204ENST00000440480 CAVIN1Q6NZI2 390 aaKnown RBP25.08■■□□□ 1.61
CDKN1C-204ENST00000440480 CYB5R4Q7L1T6 521 aa25.08■■□□□ 1.61
CDKN1C-204ENST00000440480 BRF1Q92994 677 aa25.08■■□□□ 1.61
CDKN1C-204ENST00000440480 TMOD2Q9NZR1 351 aa25.08■■□□□ 1.61
CDKN1C-204ENST00000440480 PSME4Q14997 1843 aa25.08■■□□□ 1.61
CDKN1C-204ENST00000440480 MYO1BO43795 1136 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 NPM3O75607 178 aaKnown RBP25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 PRDM1O75626 825 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 ANTXR2P58335 489 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 ZNF280AP59817 542 aaPredicted RBP25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 ZNF445P59923 1031 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 ST3GAL1Q11201 340 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 GPC2Q8N158 579 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 TMEM87AQ8NBN3 555 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 NKX2-3Q8TAU0 364 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 AGXT2Q9BYV1 514 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 ZNF287Q9HBT7 754 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 CNOT7Q9UIV1 285 aaKnown RBP25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 GRIN3BO60391 1043 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 RANBP6O60518 1105 aaKnown RBP25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 TCP10Q12799 353 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 GTF3C6Q969F1 213 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 DYNLL2Q96FJ2 89 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 MKNK2Q9HBH9 465 aa25.07■■□□□ 1.6
CDKN1C-204ENST00000440480 ORC4O43929 436 aa25.06■■□□□ 1.6
CDKN1C-204ENST00000440480 XRCC6P12956 609 aaKnown RBP eCLIP25.06■■□□□ 1.6
CDKN1C-204ENST00000440480 C9orf131Q5VYM1 1079 aa25.06■■□□□ 1.6
CDKN1C-204ENST00000440480 MICALL2Q8IY33 904 aa25.06■■□□□ 1.6
CDKN1C-204ENST00000440480 TMEM87BQ96K49 555 aa25.06■■□□□ 1.6
CDKN1C-204ENST00000440480 LLPHQ9BRT6 129 aaKnown RBP25.06■■□□□ 1.6
CDKN1C-204ENST00000440480 FAM198AQ9UFP1 575 aa25.06■■□□□ 1.6
CDKN1C-204ENST00000440480 MTMR6Q9Y217 621 aa25.06■■□□□ 1.6
CDKN1C-204ENST00000440480 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.06■■□□□ 1.6
CDKN1C-204ENST00000440480 GPT2Q8TD30 523 aa25.05■■□□□ 1.6
CDKN1C-204ENST00000440480 DHX36Q9H2U1 1008 aaKnown RBP25.05■■□□□ 1.6
CDKN1C-204ENST00000440480 KIF3AQ9Y496 699 aa25.05■■□□□ 1.6
CDKN1C-204ENST00000440480 SHTN1A0MZ66 631 aa25.05■■□□□ 1.6
CDKN1C-204ENST00000440480 WNT10BO00744 389 aa25.05■■□□□ 1.6
CDKN1C-204ENST00000440480 SART3Q15020 963 aaKnown RBP25.05■■□□□ 1.6
CDKN1C-204ENST00000440480 RBM26Q5T8P6 1007 aaKnown RBP25.05■■□□□ 1.6
CDKN1C-204ENST00000440480 ZNF70Q9UC06 446 aaPredicted RBP25.05■■□□□ 1.6
CDKN1C-204ENST00000440480 CLRN2A0PK11 232 aa25.04■■□□□ 1.6
CDKN1C-204ENST00000440480 VPS37CA5D8V6 355 aaPredicted RBP25.04■■□□□ 1.6
CDKN1C-204ENST00000440480 HLA-DOAP06340 250 aa25.04■■□□□ 1.6
CDKN1C-204ENST00000440480 ZSCAN23Q3MJ62 389 aa25.04■■□□□ 1.6
CDKN1C-204ENST00000440480 ZFPM1Q8IX07 1006 aa25.04■■□□□ 1.6
CDKN1C-204ENST00000440480 ANGEL1Q9UNK9 670 aaKnown RBP25.04■■□□□ 1.6
CDKN1C-204ENST00000440480 BAZ2AQ9UIF9 1905 aaKnown RBP25.04■■□□□ 1.6
CDKN1C-204ENST00000440480 LAMA4Q16363 1823 aa25.03■■□□□ 1.6
CDKN1C-204ENST00000440480 H7C1D1 291 aa25.03■■□□□ 1.6
CDKN1C-204ENST00000440480 IFIT3O14879 490 aaKnown RBP25.03■■□□□ 1.6
CDKN1C-204ENST00000440480 ENTPD3O75355 529 aa25.03■■□□□ 1.6
CDKN1C-204ENST00000440480 NT5C2P49902 561 aa25.03■■□□□ 1.6
CDKN1C-204ENST00000440480 STK3Q13188 491 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms