RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 PHKBQ93100 1093 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 KIFC2Q96AC6 838 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 CCDC34Q96HJ3 373 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 PANX2Q96RD6 677 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 STRBPQ96SI9 672 aaKnown RBP4.91□□□□□ -1.62
HLA-N-201ENST00000437516 SLC26A6Q9BXS9 759 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 TEX13AQ9BXU3 409 aaPredicted RBP4.91□□□□□ -1.62
HLA-N-201ENST00000437516 PARD6BQ9BYG5 372 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 FOXP1Q9H334 677 aaPredicted RBP4.91□□□□□ -1.62
HLA-N-201ENST00000437516 CNNM2Q9H8M5 875 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 LY9Q9HBG7 655 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 ARFGAP3Q9NP61 516 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 PIH1D3Q9NQM4 214 aaKnown RBP4.91□□□□□ -1.62
HLA-N-201ENST00000437516 PODXL2Q9NZ53 605 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 TBC1D2BQ9UPU7 963 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 NFE2L3Q9Y4A8 694 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 SRPRBQ9Y5M8 271 aaKnown RBP4.91□□□□□ -1.62
HLA-N-201ENST00000437516 ZNF142P52746 1687 aaPredicted RBP4.91□□□□□ -1.62
HLA-N-201ENST00000437516 ALS2Q96Q42 1657 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 TJP1Q07157 1748 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 NWD2Q9ULI1 1742 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 KCPQ6ZWJ8 1503 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 WDR17Q8IZU2 1322 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 PCDH11XQ9BZA7 1347 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 PCDH11YQ9BZA8 1340 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 ZNF532Q9HCE3 1301 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 COL18A1P39060 1754 aa4.91□□□□□ -1.62
HLA-N-201ENST00000437516 AFDNP55196 1824 aaKnown RBP4.9□□□□□ -1.62
HLA-N-201ENST00000437516 LAMA4Q16363 1823 aa4.9□□□□□ -1.62
HLA-N-201ENST00000437516 RIC1Q4ADV7 1423 aa4.9□□□□□ -1.62
HLA-N-201ENST00000437516 TNS2Q63HR2 1409 aa4.9□□□□□ -1.62
HLA-N-201ENST00000437516 NUP188Q5SRE5 1749 aa4.9□□□□□ -1.62
HLA-N-201ENST00000437516 PARP4Q9UKK3 1724 aaKnown RBP4.9□□□□□ -1.62
HLA-N-201ENST00000437516 CCDC196A0A1B0GTZ2 297 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 TCRBV5S4A2TA0A5A2 114 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 CCDC151A5D8V7 595 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 BTBD18B2RXH4 712 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 POLR3GO15318 223 aaPredicted RBP4.9□□□□□ -1.63
HLA-N-201ENST00000437516 POLR2DO15514 142 aaKnown RBP4.9□□□□□ -1.63
HLA-N-201ENST00000437516 ACTN4O43707 911 aaKnown RBP4.9□□□□□ -1.63
HLA-N-201ENST00000437516 ERLIN1O75477 346 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 SASH3O75995 380 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 DEXIO95424 95 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 TUBBP07437 444 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 CCDC175P0C221 793 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 PDE6AP16499 860 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 RXRAP19793 462 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 FECHP22830 423 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 TXLNAP40222 546 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 PBX1P40424 430 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 TOB1P50616 345 aaPredicted RBP4.9□□□□□ -1.63
HLA-N-201ENST00000437516 RCAN1P53805 252 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 IRX5P78411 483 aaPredicted RBP4.9□□□□□ -1.63
HLA-N-201ENST00000437516 FMR1Q06787 632 aaKnown RBP eCLIP4.9□□□□□ -1.63
HLA-N-201ENST00000437516 SLC20A2Q08357 652 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 CHRNA2Q15822 529 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 MUM1L1Q5H9M0 696 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 GIGYF2Q6Y7W6 1299 aaKnown RBP4.9□□□□□ -1.63
HLA-N-201ENST00000437516 LDHAL6AQ6ZMR3 332 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 KIF6Q6ZMV9 814 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 TOGARAM2Q6ZUX3 1019 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 SH3RF1Q7Z6J0 888 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 PPFIBP1Q86W92 1011 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 MICU3Q86XE3 530 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 DIS3L2Q8IYB7 885 aaKnown RBP4.9□□□□□ -1.63
HLA-N-201ENST00000437516 TRIM22Q8IYM9 498 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 IFNL3Q8IZI9 196 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 MSANTD4Q8NCY6 345 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 TTLL11Q8NHH1 800 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 SPATA20Q8TB22 786 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 CCDC12Q8WUD4 166 aaPredicted RBP4.9□□□□□ -1.63
HLA-N-201ENST00000437516 STAG1Q8WVM7 1258 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 EXOC4Q96A65 974 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 AIDAQ96BJ3 306 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 DHX58Q96C10 678 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 CCDC51Q96ER9 411 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 AK7Q96M32 723 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 CTAGE1Q96RT6 745 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 WDR24Q96S15 920 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 FUT8Q9BYC5 575 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 GBP3Q9H0R5 595 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 NAPBQ9H115 298 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 SENP2Q9HC62 589 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 TMEM51Q9NW97 253 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 AATFQ9NY61 560 aaKnown RBP eCLIP4.9□□□□□ -1.63
HLA-N-201ENST00000437516 CWC15Q9P013 229 aaKnown RBP4.9□□□□□ -1.63
HLA-N-201ENST00000437516 CDC23Q9UJX2 597 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 DENND2AQ9ULE3 1009 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 ADGRG1Q9Y653 693 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 SLC12A7Q9Y666 1083 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 ITIH6Q6UXX5 1313 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 UBN2Q6ZU65 1347 aa4.9□□□□□ -1.63
HLA-N-201ENST00000437516 TNS3Q68CZ2 1445 aa4.89□□□□□ -1.63
HLA-N-201ENST00000437516 DDX60Q8IY21 1712 aaKnown RBP4.89□□□□□ -1.63
HLA-N-201ENST00000437516 ERICH2A1L162 156 aa4.89□□□□□ -1.63
HLA-N-201ENST00000437516 MAP2K7O14733 419 aa4.89□□□□□ -1.63
HLA-N-201ENST00000437516 KIF5CO60282 957 aa4.89□□□□□ -1.63
HLA-N-201ENST00000437516 PDE8AO60658 829 aa4.89□□□□□ -1.63
HLA-N-201ENST00000437516 EIF3JO75822 258 aaKnown RBP4.89□□□□□ -1.63
HLA-N-201ENST00000437516 IDH1O75874 414 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms