RNA–Protein interactions for RNA: ENST00000433867.5

PRKD2-202, Transcript of protein kinase D2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PRKD2, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-202ENST00000433867 ALX1Q15699 326 aa17.1■□□□□ 0.33
PRKD2-202ENST00000433867 MEX3CQ5U5Q3 659 aaKnown RBP17.1■□□□□ 0.33
PRKD2-202ENST00000433867 KCNH3Q9ULD8 1083 aa17.1■□□□□ 0.33
PRKD2-202ENST00000433867 PCDHB6Q9Y5E3 794 aa17.1■□□□□ 0.33
PRKD2-202ENST00000433867 TSPY2A6NKD2 308 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 CAVIN2O95810 425 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 LONRF3Q496Y0 759 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 SGMS1Q86VZ5 419 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 FBXL16Q8N461 479 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 XPO4Q9C0E2 1151 aaKnown RBP17.09■□□□□ 0.33
PRKD2-202ENST00000433867 MCM9Q9NXL9 1143 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 LAMA4Q16363 1823 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 POLR2DO15514 142 aaKnown RBP17.09■□□□□ 0.33
PRKD2-202ENST00000433867 PLEKHA8P1O95397 391 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 CDK11BP21127 795 aaKnown RBP17.09■□□□□ 0.33
PRKD2-202ENST00000433867 UBE4AQ14139 1066 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 CFAP100Q494V2 611 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 BSDC1Q9NW68 430 aaPredicted RBP17.09■□□□□ 0.33
PRKD2-202ENST00000433867 ATP1A3P13637 1013 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 IFNAR1P17181 557 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 AFMP43652 599 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 KLHL10Q6JEL2 608 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 OLFM4Q6UX06 510 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 ITGB4P16144 1822 aa17.09■□□□□ 0.33
PRKD2-202ENST00000433867 FMNL1O95466 1100 aaPredicted RBP17.08■□□□□ 0.33
PRKD2-202ENST00000433867 USP5P45974 858 aa17.08■□□□□ 0.33
PRKD2-202ENST00000433867 MECOMQ03112 1051 aa17.08■□□□□ 0.33
PRKD2-202ENST00000433867 STAG1Q8WVM7 1258 aa17.08■□□□□ 0.33
PRKD2-202ENST00000433867 STAMQ92783 540 aa17.08■□□□□ 0.33
PRKD2-202ENST00000433867 MYO5AQ9Y4I1 1855 aaKnown RBP17.08■□□□□ 0.33
PRKD2-202ENST00000433867 CRACR2BQ8N4Y2 399 aaPredicted RBP17.08■□□□□ 0.32
PRKD2-202ENST00000433867 RIOK3O14730 519 aaKnown RBP17.08■□□□□ 0.32
PRKD2-202ENST00000433867 DEXIO95424 95 aa17.08■□□□□ 0.32
PRKD2-202ENST00000433867 KRI1Q8N9T8 703 aaKnown RBP17.08■□□□□ 0.32
PRKD2-202ENST00000433867 XBP1P17861 261 aa17.07■□□□□ 0.32
PRKD2-202ENST00000433867 ZNF174Q15697 407 aa17.07■□□□□ 0.32
PRKD2-202ENST00000433867 TMTC2Q8N394 836 aa17.07■□□□□ 0.32
PRKD2-202ENST00000433867 ZSCAN10Q96SZ4 725 aaPredicted RBP17.07■□□□□ 0.32
PRKD2-202ENST00000433867 SHANK3Q9BYB0 1731 aa17.07■□□□□ 0.32
PRKD2-202ENST00000433867 RRP9O43818 475 aaKnown RBP17.07■□□□□ 0.32
PRKD2-202ENST00000433867 USP49Q70CQ1 688 aa17.07■□□□□ 0.32
PRKD2-202ENST00000433867 ENAHQ8N8S7 591 aaPredicted RBP17.07■□□□□ 0.32
PRKD2-202ENST00000433867 PCDHA5Q9Y5H7 936 aa17.07■□□□□ 0.32
PRKD2-202ENST00000433867 WDR19Q8NEZ3 1342 aa17.07■□□□□ 0.32
PRKD2-202ENST00000433867 MMP1P03956 469 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 NLRP12P59046 1061 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 GOLGA8FQ08AF8 430 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 GOLGA8DPQ0D2H9 430 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 CLEC4GQ6UXB4 293 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 ARHGEF1Q92888 912 aaKnown RBP17.06■□□□□ 0.32
PRKD2-202ENST00000433867 DHX58Q96C10 678 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 USP21Q9UK80 565 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 NUP98P52948 1817 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 DIXDC1Q155Q3 683 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 AMIGO3Q86WK7 504 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 LRRC8AQ8IWT6 810 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 TRMT44Q8IYL2 757 aaKnown RBP17.06■□□□□ 0.32
PRKD2-202ENST00000433867 CTCFLQ8NI51 663 aaPredicted RBP17.06■□□□□ 0.32
PRKD2-202ENST00000433867 CRNKL1Q9BZJ0 848 aaKnown RBP17.06■□□□□ 0.32
PRKD2-202ENST00000433867 SERTAD1Q9UHV2 236 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 USP27XA6NNY8 438 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 USP17L8P0C7I0 530 aa17.06■□□□□ 0.32
PRKD2-202ENST00000433867 SAP30BPQ9UHR5 308 aaKnown RBP17.06■□□□□ 0.32
PRKD2-202ENST00000433867 CASP1P29466 404 aa17.05■□□□□ 0.32
PRKD2-202ENST00000433867 FAM177A1Q8N128 213 aaPredicted RBP17.05■□□□□ 0.32
PRKD2-202ENST00000433867 MYRIPQ8NFW9 859 aa17.05■□□□□ 0.32
PRKD2-202ENST00000433867 DYNLL2Q96FJ2 89 aa17.05■□□□□ 0.32
PRKD2-202ENST00000433867 BCL2L12Q9HB09 334 aa17.05■□□□□ 0.32
PRKD2-202ENST00000433867 MKNK2Q9HBH9 465 aa17.05■□□□□ 0.32
PRKD2-202ENST00000433867 STX8Q9UNK0 236 aa17.05■□□□□ 0.32
PRKD2-202ENST00000433867 SLIT2O94813 1529 aa17.05■□□□□ 0.32
PRKD2-202ENST00000433867 DYNC1I1O14576 645 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 PTPAQ15257 358 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 NOM1Q5C9Z4 860 aaKnown RBP17.04■□□□□ 0.32
PRKD2-202ENST00000433867 CTR9Q6PD62 1173 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.04■□□□□ 0.32
PRKD2-202ENST00000433867 RASSF8Q8NHQ8 419 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 ZNF804BA4D1E1 1349 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 PNPLA7Q6ZV29 1317 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 LRP6O75581 1613 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 SMTNL1A8MU46 457 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 NLRP5P59047 1200 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 SF3B3Q15393 1217 aaKnown RBP17.04■□□□□ 0.32
PRKD2-202ENST00000433867 FAM196AQ6ZSG2 479 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 RIOK1Q9BRS2 568 aaKnown RBP17.04■□□□□ 0.32
PRKD2-202ENST00000433867 NYXQ9GZU5 481 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRKD2-202ENST00000433867 V9GYY5 206 aaPredicted RBP17.04■□□□□ 0.32
PRKD2-202ENST00000433867 TOB1P50616 345 aaPredicted RBP17.04■□□□□ 0.32
PRKD2-202ENST00000433867 STX17P56962 302 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 UBASH3AP57075 661 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 AKAP11Q9UKA4 1901 aa17.04■□□□□ 0.32
PRKD2-202ENST00000433867 CUTAO60888 179 aa17.03■□□□□ 0.32
PRKD2-202ENST00000433867 COBLO75128 1261 aa17.03■□□□□ 0.32
PRKD2-202ENST00000433867 SFPQP23246 707 aaKnown RBP eCLIP17.03■□□□□ 0.32
PRKD2-202ENST00000433867 FANCCQ00597 558 aa17.03■□□□□ 0.32
PRKD2-202ENST00000433867 PRIMPOLQ96LW4 560 aa17.03■□□□□ 0.32
PRKD2-202ENST00000433867 ROBO1Q9Y6N7 1651 aa17.03■□□□□ 0.32
PRKD2-202ENST00000433867 U2AF2P26368 475 aaKnown RBP eCLIP17.03■□□□□ 0.32
PRKD2-202ENST00000433867 HOMER1Q86YM7 354 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms