RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 ICMTO60725 284 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 GSTP1P09211 210 aaKnown RBP2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 AFMP43652 599 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 RAP1GAPP47736 663 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 CLCN7P51798 805 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 ERVK-24P63145 666 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 MTMR3Q13615 1198 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 KCNMB1Q16558 191 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 AOC3Q16853 763 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 KIF4BQ2VIQ3 1234 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 LCE1DQ5T752 114 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 SCARA3Q6AZY7 606 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 SEZ6L2Q6UXD5 910 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 DTHD1Q6ZMT9 781 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 GLIS3Q8NEA6 775 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 FLAD1Q8NFF5 587 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 COX4I2Q96KJ9 171 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 FANCD2OSQ96PS1 177 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 TRIM56Q9BRZ2 755 aaKnown RBP2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 CEP44Q9C0F1 390 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 SRCIN1Q9C0H9 1055 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 TUT1Q9H6E5 874 aaKnown RBP2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 NPHS2Q9NP85 383 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 TMEM39AQ9NV64 488 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 CCDC87Q9NVE4 849 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 ADAMTS7Q9UKP4 1686 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 ABCA12Q86UK0 2595 aa2.37□□□□□ -2.03
HMGN1P33-201ENST00000432945 GOLGB1Q14789 3259 aaKnown RBP2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 TMEM88BA6NKF7 163 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 KRT37O76014 449 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 POLR3DP05423 398 aaPredicted RBP2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 CD8BP10966 210 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 RAC2P15153 192 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 CDK5R2Q13319 367 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 ZNF211Q13398 564 aaPredicted RBP2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 IKZF1Q13422 519 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 LRRC14Q15048 493 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 SPRED3Q2MJR0 410 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 ZNF648Q5T619 568 aaPredicted RBP2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 MPZL3Q6UWV2 235 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 ZNF574Q6ZN55 896 aaPredicted RBP2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 CDC37L1Q7L3B6 337 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 PLD6Q8N2A8 252 aaKnown RBP2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 RNF214Q8ND24 703 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 CCER1Q8TC90 406 aaPredicted RBP2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 KCNB2Q92953 911 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 CCDC74AQ96AQ1 378 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 ALKBH8Q96BT7 664 aaKnown RBP2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 GCC1Q96CN9 775 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 FAM129BQ96TA1 746 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 DUSP23Q9BVJ7 150 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 FOXQ1Q9C009 403 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 ABCB6Q9NP58 842 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 LMCD1Q9NZU5 365 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 SLAIN2Q9P270 581 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 PPP1R9AQ9ULJ8 1098 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 CDK12Q9NYV4 1490 aaPredicted RBP2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 STRCQ7RTU9 1775 aa2.36□□□□□ -2.03
HMGN1P33-201ENST00000432945 BCL9LQ86UU0 1499 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 UNC13AQ9UPW8 1703 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 NFIBO00712 420 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 EIF1AYO14602 144 aaKnown RBP2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 FANCGO15287 622 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 TSPAN15O95858 294 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 RNASE1P07998 156 aaKnown RBP2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 HCLS1P14317 486 aaPredicted RBP2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 LIG1P18858 919 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 ITIH2P19823 946 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 NME2P22392 152 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 CYP7A1P22680 504 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 TTLL4Q14679 1199 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 FBLN7Q53RD9 439 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 NFXL1Q6ZNB6 911 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 SPRED2Q7Z698 418 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 ANKLE2Q86XL3 938 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 SIAH1Q8IUQ4 282 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 SULF2Q8IWU5 870 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 CCDC82Q8N4S0 544 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 TOP6BLQ8N6T0 577 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 LRRN4CLQ8ND94 238 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 SYTL4Q96C24 671 aaPredicted RBP2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 TNKS2Q9H2K2 1166 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 CCDC86Q9H6F5 360 aaKnown RBP2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 LGR6Q9HBX8 967 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 PRDM5Q9NQX1 630 aaPredicted RBP2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 MBNL3Q9NUK0 354 aaKnown RBP2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 RAPGEFL1Q9UHV5 662 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 PPM1HQ9ULR3 514 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 MAPK8IP1Q9UQF2 711 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 EP400Q96L91 3159 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 NOTCH2Q04721 2471 aa2.35□□□□□ -2.03
HMGN1P33-201ENST00000432945 FAM155AB1AL88 458 aaPredicted RBP2.34□□□□□ -2.03
HMGN1P33-201ENST00000432945 GIPC1O14908 333 aa2.34□□□□□ -2.03
HMGN1P33-201ENST00000432945 DYNC1LI2O43237 492 aaPredicted RBP2.34□□□□□ -2.03
HMGN1P33-201ENST00000432945 CTSBP07858 339 aa2.34□□□□□ -2.03
HMGN1P33-201ENST00000432945 GLI1P08151 1106 aa2.34□□□□□ -2.03
HMGN1P33-201ENST00000432945 LMNB1P20700 586 aa2.34□□□□□ -2.03
HMGN1P33-201ENST00000432945 ARNTP27540 789 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms