RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 IGDCC4Q8TDY8 1250 aa17.76■□□□□ 0.43
GINS3-203ENST00000426538 GPHNQ9NQX3 736 aaPredicted RBP17.76■□□□□ 0.43
GINS3-203ENST00000426538 PCDHAC2Q9Y5I4 1007 aa17.76■□□□□ 0.43
GINS3-203ENST00000426538 NAV1Q8NEY1 1877 aa17.76■□□□□ 0.43
GINS3-203ENST00000426538 SH2B2O14492 632 aaPredicted RBP17.75■□□□□ 0.43
GINS3-203ENST00000426538 PFKFB2O60825 505 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 PDIA3P30101 505 aaKnown RBP17.75■□□□□ 0.43
GINS3-203ENST00000426538 LIFRP42702 1097 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 EVX2Q03828 476 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 NKX2-3Q8TAU0 364 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 ZKSCAN3Q9BRR0 538 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.75■□□□□ 0.43
GINS3-203ENST00000426538 CDK5RAP2Q96SN8 1893 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 LAMB1P07942 1786 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 KLF18A0A0U1RQI7 1052 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 MMP14P50281 582 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 NUCB2P80303 420 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 WTAPQ15007 396 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 ZNF444Q8N0Y2 327 aaPredicted RBP17.75■□□□□ 0.43
GINS3-203ENST00000426538 GTF3C6Q969F1 213 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 DYNLL2Q96FJ2 89 aa17.75■□□□□ 0.43
GINS3-203ENST00000426538 PRMT6Q96LA8 375 aaPredicted RBP17.75■□□□□ 0.43
GINS3-203ENST00000426538 DDX4Q9NQI0 724 aaKnown RBP17.75■□□□□ 0.43
GINS3-203ENST00000426538 CCDC69A6NI79 296 aa17.74■□□□□ 0.43
GINS3-203ENST00000426538 TSPY2A6NKD2 308 aa17.74■□□□□ 0.43
GINS3-203ENST00000426538 FZD9O00144 591 aa17.74■□□□□ 0.43
GINS3-203ENST00000426538 LMNB1P20700 586 aa17.74■□□□□ 0.43
GINS3-203ENST00000426538 RPS12P25398 132 aaKnown RBP17.74■□□□□ 0.43
GINS3-203ENST00000426538 SYNE3Q6ZMZ3 975 aa17.74■□□□□ 0.43
GINS3-203ENST00000426538 IDI2Q9BXS1 227 aa17.74■□□□□ 0.43
GINS3-203ENST00000426538 OSBPL5Q9H0X9 879 aaPredicted RBP17.74■□□□□ 0.43
GINS3-203ENST00000426538 TDRD3Q9H7E2 651 aaKnown RBP17.74■□□□□ 0.43
GINS3-203ENST00000426538 TMOD2Q9NZR1 351 aa17.74■□□□□ 0.43
GINS3-203ENST00000426538 ROBO3Q96MS0 1386 aa17.74■□□□□ 0.43
GINS3-203ENST00000426538 ADAMTSL1Q8N6G6 1762 aa17.73■□□□□ 0.43
GINS3-203ENST00000426538 SPDYE2BA6NHP3 402 aa17.73■□□□□ 0.43
GINS3-203ENST00000426538 DHX16O60231 1041 aaKnown RBP17.73■□□□□ 0.43
GINS3-203ENST00000426538 HLA-DOAP06340 250 aa17.73■□□□□ 0.43
GINS3-203ENST00000426538 SPDYE6P0CI01 402 aa17.73■□□□□ 0.43
GINS3-203ENST00000426538 CCT2P78371 535 aaKnown RBP17.73■□□□□ 0.43
GINS3-203ENST00000426538 SCRN1Q12765 414 aa17.73■□□□□ 0.43
GINS3-203ENST00000426538 NFIAQ12857 509 aa17.73■□□□□ 0.43
GINS3-203ENST00000426538 SGMS1Q86VZ5 419 aa17.73■□□□□ 0.43
GINS3-203ENST00000426538 ZSCAN10Q96SZ4 725 aaPredicted RBP17.73■□□□□ 0.43
GINS3-203ENST00000426538 LY9Q9HBG7 655 aa17.73■□□□□ 0.43
GINS3-203ENST00000426538 MYH1P12882 1939 aa17.73■□□□□ 0.43
GINS3-203ENST00000426538 NPM3O75607 178 aaKnown RBP17.72■□□□□ 0.43
GINS3-203ENST00000426538 PRELPP51888 382 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 CACNB3P54284 484 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 TCP10Q12799 353 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 C16orf86Q6ZW13 317 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 DHX36Q9H2U1 1008 aaKnown RBP17.72■□□□□ 0.43
GINS3-203ENST00000426538 BRPF3Q9ULD4 1205 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 SLC12A7Q9Y666 1083 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 GJA3Q9Y6H8 435 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 FOCADQ5VW36 1801 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 GOLGA8BA8MQT2 603 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 MYO1BO43795 1136 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 TNKSO95271 1327 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 GJB2P29033 226 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 CDK8P49336 464 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 TFAP4Q01664 338 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 ST3GAL1Q11201 340 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 FAM47AQ5JRC9 791 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 ZSCAN29Q8IWY8 852 aaPredicted RBP17.72■□□□□ 0.43
GINS3-203ENST00000426538 MTMR14Q8NCE2 650 aa17.72■□□□□ 0.43
GINS3-203ENST00000426538 TSPY3P0CV98 308 aa17.71■□□□□ 0.43
GINS3-203ENST00000426538 TSPY8P0CW00 308 aa17.71■□□□□ 0.43
GINS3-203ENST00000426538 LLPHQ9BRT6 129 aaKnown RBP17.71■□□□□ 0.43
GINS3-203ENST00000426538 SERPINB13Q9UIV8 391 aa17.71■□□□□ 0.43
GINS3-203ENST00000426538 ECM29Q5VYK3 1845 aa17.71■□□□□ 0.43
GINS3-203ENST00000426538 ZBTB43O43298 467 aa17.7■□□□□ 0.42
GINS3-203ENST00000426538 CCDC178Q5BJE1 867 aa17.7■□□□□ 0.42
GINS3-203ENST00000426538 IFIT1BQ5T764 474 aaKnown RBP17.7■□□□□ 0.42
GINS3-203ENST00000426538 APOA5Q6Q788 366 aa17.7■□□□□ 0.42
GINS3-203ENST00000426538 DPF2Q92785 391 aa17.7■□□□□ 0.42
GINS3-203ENST00000426538 MYOZ2Q9NPC6 264 aa17.7■□□□□ 0.42
GINS3-203ENST00000426538 FAM198AQ9UFP1 575 aa17.7■□□□□ 0.42
GINS3-203ENST00000426538 CPLX1O14810 134 aa17.69■□□□□ 0.42
GINS3-203ENST00000426538 ENTPD3O75355 529 aa17.69■□□□□ 0.42
GINS3-203ENST00000426538 METAP2P50579 478 aaKnown RBP eCLIP17.69■□□□□ 0.42
GINS3-203ENST00000426538 ENAHQ8N8S7 591 aaPredicted RBP17.69■□□□□ 0.42
GINS3-203ENST00000426538 SLC44A5Q8NCS7 719 aa17.69■□□□□ 0.42
GINS3-203ENST00000426538 SENP2Q9HC62 589 aa17.69■□□□□ 0.42
GINS3-203ENST00000426538 NCOA5Q9HCD5 579 aaKnown RBP17.69■□□□□ 0.42
GINS3-203ENST00000426538 SWAP70Q9UH65 585 aa17.69■□□□□ 0.42
GINS3-203ENST00000426538 PDIA4P13667 645 aaKnown RBP17.69■□□□□ 0.42
GINS3-203ENST00000426538 RAB3GAP1Q15042 981 aa17.69■□□□□ 0.42
GINS3-203ENST00000426538 SEC23AQ15436 765 aa17.69■□□□□ 0.42
GINS3-203ENST00000426538 MICU3Q86XE3 530 aa17.69■□□□□ 0.42
GINS3-203ENST00000426538 ZFPM1Q8IX07 1006 aa17.69■□□□□ 0.42
GINS3-203ENST00000426538 CRACR2BQ8N4Y2 399 aaPredicted RBP17.69■□□□□ 0.42
GINS3-203ENST00000426538 PI4KBQ9UBF8 816 aa17.69■□□□□ 0.42
GINS3-203ENST00000426538 ZNF70Q9UC06 446 aaPredicted RBP17.69■□□□□ 0.42
GINS3-203ENST00000426538 HPS5Q9UPZ3 1129 aa17.69■□□□□ 0.42
GINS3-203ENST00000426538 CLRN2A0PK11 232 aa17.68■□□□□ 0.42
GINS3-203ENST00000426538 RASA1P20936 1047 aa17.68■□□□□ 0.42
GINS3-203ENST00000426538 GMPSP49915 693 aaPredicted RBP17.68■□□□□ 0.42
GINS3-203ENST00000426538 HMGN5P82970 282 aaKnown RBP17.68■□□□□ 0.42
GINS3-203ENST00000426538 GABPAQ06546 454 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms