RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 CYB5R4Q7L1T6 521 aa16.77■□□□□ 0.28
HMGA1P1-201ENST00000415560 LARP6Q9BRS8 491 aaKnown RBP16.77■□□□□ 0.28
HMGA1P1-201ENST00000415560 OSBPL5Q9H0X9 879 aaPredicted RBP16.77■□□□□ 0.28
HMGA1P1-201ENST00000415560 FOXD4L1Q9NU39 408 aa16.77■□□□□ 0.28
HMGA1P1-201ENST00000415560 TPCN1Q9ULQ1 816 aa16.77■□□□□ 0.28
HMGA1P1-201ENST00000415560 ANGEL1Q9UNK9 670 aaKnown RBP16.77■□□□□ 0.28
HMGA1P1-201ENST00000415560 GJA3Q9Y6H8 435 aa16.77■□□□□ 0.28
HMGA1P1-201ENST00000415560 CCDC69A6NI79 296 aa16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 ENTPD3O75355 529 aa16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 CYP2D6P10635 497 aa16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 EVCP57679 992 aa16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 ANTXR2P58335 489 aa16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 APOBRQ0VD83 1088 aa16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 WTAPQ15007 396 aa16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 NFXL1Q6ZNB6 911 aa16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 PRMT6Q96LA8 375 aaPredicted RBP16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 TDRD3Q9H7E2 651 aaKnown RBP16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 INCENPQ9NQS7 918 aa16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 NAP1L2Q9ULW6 460 aaPredicted RBP16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 ROBO3Q96MS0 1386 aa16.76■□□□□ 0.27
HMGA1P1-201ENST00000415560 SPDYE2BA6NHP3 402 aa16.75■□□□□ 0.27
HMGA1P1-201ENST00000415560 TSPY2A6NKD2 308 aa16.75■□□□□ 0.27
HMGA1P1-201ENST00000415560 SH2B2O14492 632 aaPredicted RBP16.75■□□□□ 0.27
HMGA1P1-201ENST00000415560 DHX16O60231 1041 aaKnown RBP16.75■□□□□ 0.27
HMGA1P1-201ENST00000415560 SPDYE6P0CI01 402 aa16.75■□□□□ 0.27
HMGA1P1-201ENST00000415560 PDIA4P13667 645 aaKnown RBP16.75■□□□□ 0.27
HMGA1P1-201ENST00000415560 IGDCC4Q8TDY8 1250 aa16.75■□□□□ 0.27
HMGA1P1-201ENST00000415560 TRIM34Q9BYJ4 488 aa16.75■□□□□ 0.27
HMGA1P1-201ENST00000415560 SWAP70Q9UH65 585 aa16.75■□□□□ 0.27
HMGA1P1-201ENST00000415560 SMC3Q9UQE7 1217 aa16.75■□□□□ 0.27
HMGA1P1-201ENST00000415560 SBF1O95248 1867 aa16.75■□□□□ 0.27
HMGA1P1-201ENST00000415560 H7C1D1 291 aa16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 PFKFB2O60825 505 aa16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 PLCD1P51178 756 aa16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 STK3Q13188 491 aa16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 COL9A3Q14050 684 aaPredicted RBP16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 GPR162Q16538 588 aa16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 C16orf86Q6ZW13 317 aa16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 CCDC83Q8IWF9 413 aa16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 ZSCAN29Q8IWY8 852 aaPredicted RBP16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 ZSCAN10Q96SZ4 725 aaPredicted RBP16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 MYOZ2Q9NPC6 264 aa16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 TACC3Q9Y6A5 838 aa16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 ADAMTSL1Q8N6G6 1762 aa16.74■□□□□ 0.27
HMGA1P1-201ENST00000415560 KLF18A0A0U1RQI7 1052 aa16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 GRIN3BO60391 1043 aa16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 PRDM1O75626 825 aa16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 PDIA3P30101 505 aaKnown RBP16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 TNNI2P48788 182 aa16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 CDK8P49336 464 aa16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 ZNF280AP59817 542 aaPredicted RBP16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 NUCB2P80303 420 aa16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 FKBP1CQ5VVH2 108 aa16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 SGMS1Q86VZ5 419 aa16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 FOXP4Q8IVH2 680 aaPredicted RBP16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 GPC2Q8N158 579 aa16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 DYNLL2Q96FJ2 89 aa16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 LLPHQ9BRT6 129 aaKnown RBP16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 DDX4Q9NQI0 724 aaKnown RBP16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 PI4KBQ9UBF8 816 aa16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 ZNF70Q9UC06 446 aaPredicted RBP16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 CNOT7Q9UIV1 285 aaKnown RBP16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 SLC12A7Q9Y666 1083 aa16.73■□□□□ 0.27
HMGA1P1-201ENST00000415560 TSPY3P0CV98 308 aa16.72■□□□□ 0.27
HMGA1P1-201ENST00000415560 TSPY8P0CW00 308 aa16.72■□□□□ 0.27
HMGA1P1-201ENST00000415560 GMPSP49915 693 aaPredicted RBP16.72■□□□□ 0.27
HMGA1P1-201ENST00000415560 PRELPP51888 382 aa16.72■□□□□ 0.27
HMGA1P1-201ENST00000415560 TFAP4Q01664 338 aa16.72■□□□□ 0.27
HMGA1P1-201ENST00000415560 SLC4A8Q2Y0W8 1093 aa16.72■□□□□ 0.27
HMGA1P1-201ENST00000415560 CPLX2Q6PUV4 134 aaKnown RBP16.72■□□□□ 0.27
HMGA1P1-201ENST00000415560 CRACR2BQ8N4Y2 399 aaPredicted RBP16.72■□□□□ 0.27
HMGA1P1-201ENST00000415560 GTF3C6Q969F1 213 aa16.72■□□□□ 0.27
HMGA1P1-201ENST00000415560 EHD4Q9H223 541 aa16.72■□□□□ 0.27
HMGA1P1-201ENST00000415560 SERPINB13Q9UIV8 391 aa16.72■□□□□ 0.27
HMGA1P1-201ENST00000415560 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
HMGA1P1-201ENST00000415560 DDX60LQ5H9U9 1706 aaKnown RBP16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 LARGE1O95461 756 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 YBX3P16989 372 aaKnown RBP eCLIP16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 TCP10Q12799 353 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 NFIAQ12857 509 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 PPP2R5BQ15173 497 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 SPDYE2Q495Y8 402 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 IFIT1BQ5T764 474 aaKnown RBP16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 MICALL2Q8IY33 904 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 NECAB1Q8N987 351 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 FAM151AQ8WW52 585 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 ZKSCAN3Q9BRR0 538 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 LY9Q9HBG7 655 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 TCP11L1Q9NUJ3 509 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 RNF181Q9P0P0 153 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 FAM198AQ9UFP1 575 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 KIF3AQ9Y496 699 aa16.71■□□□□ 0.27
HMGA1P1-201ENST00000415560 TNKSO95271 1327 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 CPLX1O14810 134 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 ZBTB43O43298 467 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 CALM1P0DP23 149 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 CALM2P0DP24 149 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 CALM3P0DP25 149 aa16.7■□□□□ 0.26
HMGA1P1-201ENST00000415560 RCAN1P53805 252 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms