RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 DEFB118Q96PH6 123 aa17.6■□□□□ 0.41
HLA-DQB2-229ENST00000411527 OSBPL5Q9H0X9 879 aaPredicted RBP17.6■□□□□ 0.41
HLA-DQB2-229ENST00000411527 ATAD5Q96QE3 1844 aa17.59■□□□□ 0.41
HLA-DQB2-229ENST00000411527 RARSP54136 660 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB2-229ENST00000411527 MTX1Q13505 466 aa17.59■□□□□ 0.41
HLA-DQB2-229ENST00000411527 PROCA1Q8NCQ7 364 aaPredicted RBP17.59■□□□□ 0.41
HLA-DQB2-229ENST00000411527 ARHGAP45Q92619 1136 aa17.59■□□□□ 0.41
HLA-DQB2-229ENST00000411527 NSUN4Q96CB9 384 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB2-229ENST00000411527 RAI14Q9P0K7 980 aa17.59■□□□□ 0.41
HLA-DQB2-229ENST00000411527 PNMA3Q9UL41 463 aa17.59■□□□□ 0.41
HLA-DQB2-229ENST00000411527 ZBTB7BO15156 539 aaPredicted RBP17.58■□□□□ 0.4
HLA-DQB2-229ENST00000411527 EVI5O60447 810 aa17.58■□□□□ 0.4
HLA-DQB2-229ENST00000411527 MAP4K4O95819 1239 aaPredicted RBP17.58■□□□□ 0.4
HLA-DQB2-229ENST00000411527 FAM110CQ1W6H9 321 aa17.58■□□□□ 0.4
HLA-DQB2-229ENST00000411527 ZNF280CQ8ND82 737 aa17.58■□□□□ 0.4
HLA-DQB2-229ENST00000411527 CAPN2P17655 700 aa17.57■□□□□ 0.4
HLA-DQB2-229ENST00000411527 HMGCS2P54868 508 aa17.57■□□□□ 0.4
HLA-DQB2-229ENST00000411527 PRO3102Q9H379 93 aa17.57■□□□□ 0.4
HLA-DQB2-229ENST00000411527 PAK6Q9NQU5 681 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB2-229ENST00000411527 LOC285556D6RIA3 1793 aa17.56■□□□□ 0.4
HLA-DQB2-229ENST00000411527 ARID4AP29374 1257 aaPredicted RBP17.56■□□□□ 0.4
HLA-DQB2-229ENST00000411527 CAP2P40123 477 aa17.56■□□□□ 0.4
HLA-DQB2-229ENST00000411527 GCLCP48506 637 aaPredicted RBP17.56■□□□□ 0.4
HLA-DQB2-229ENST00000411527 G3BP1Q13283 466 aaKnown RBP eCLIP17.56■□□□□ 0.4
HLA-DQB2-229ENST00000411527 PABPC4Q13310 644 aaKnown RBP eCLIP17.56■□□□□ 0.4
HLA-DQB2-229ENST00000411527 RRP1BQ14684 758 aaKnown RBP17.56■□□□□ 0.4
HLA-DQB2-229ENST00000411527 TEX11Q8IYF3 940 aa17.56■□□□□ 0.4
HLA-DQB2-229ENST00000411527 PAWRQ96IZ0 340 aaKnown RBP17.56■□□□□ 0.4
HLA-DQB2-229ENST00000411527 TBC1D2Q9BYX2 928 aa17.56■□□□□ 0.4
HLA-DQB2-229ENST00000411527 LRP2BPQ9P2M1 347 aa17.56■□□□□ 0.4
HLA-DQB2-229ENST00000411527 COL2A1P02458 1487 aaPredicted RBP17.56■□□□□ 0.4
HLA-DQB2-229ENST00000411527 USP17L5A8MUK1 530 aa17.55■□□□□ 0.4
HLA-DQB2-229ENST00000411527 MCAMP43121 646 aa17.55■□□□□ 0.4
HLA-DQB2-229ENST00000411527 NOL10Q9BSC4 688 aaKnown RBP17.55■□□□□ 0.4
HLA-DQB2-229ENST00000411527 CRISPLD2Q9H0B8 497 aa17.55■□□□□ 0.4
HLA-DQB2-229ENST00000411527 ASCC2Q9H1I8 757 aaPredicted RBP17.55■□□□□ 0.4
HLA-DQB2-229ENST00000411527 GNAI2P04899 355 aa17.54■□□□□ 0.4
HLA-DQB2-229ENST00000411527 SH3RF3Q8TEJ3 882 aaPredicted RBP17.54■□□□□ 0.4
HLA-DQB2-229ENST00000411527 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.54■□□□□ 0.4
HLA-DQB2-229ENST00000411527 AS3MTQ9HBK9 375 aa17.54■□□□□ 0.4
HLA-DQB2-229ENST00000411527 HERC5Q9UII4 1024 aaKnown RBP17.54■□□□□ 0.4
HLA-DQB2-229ENST00000411527 PNMA6EA0A0J9YXQ4 647 aa17.53■□□□□ 0.4
HLA-DQB2-229ENST00000411527 IPO8O15397 1037 aaKnown RBP17.53■□□□□ 0.4
HLA-DQB2-229ENST00000411527 UQCRFS1P1P0C7P4 283 aa17.53■□□□□ 0.4
HLA-DQB2-229ENST00000411527 SH3D19Q5HYK7 790 aa17.53■□□□□ 0.4
HLA-DQB2-229ENST00000411527 NECAB2Q7Z6G3 386 aa17.53■□□□□ 0.4
HLA-DQB2-229ENST00000411527 SNRKQ9NRH2 765 aa17.53■□□□□ 0.4
HLA-DQB2-229ENST00000411527 PI4KBQ9UBF8 816 aa17.53■□□□□ 0.4
HLA-DQB2-229ENST00000411527 GJD2Q9UKL4 321 aa17.53■□□□□ 0.4
HLA-DQB2-229ENST00000411527 ALPK3Q96L96 1907 aa17.53■□□□□ 0.4
HLA-DQB2-229ENST00000411527 HMGCRP04035 888 aa17.52■□□□□ 0.4
HLA-DQB2-229ENST00000411527 TRIM27P14373 513 aa17.52■□□□□ 0.4
HLA-DQB2-229ENST00000411527 DIS3LQ8TF46 1054 aaKnown RBP17.52■□□□□ 0.4
HLA-DQB2-229ENST00000411527 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.4
HLA-DQB2-229ENST00000411527 DHX36Q9H2U1 1008 aaKnown RBP17.52■□□□□ 0.4
HLA-DQB2-229ENST00000411527 AATFQ9NY61 560 aaKnown RBP eCLIP17.52■□□□□ 0.4
HLA-DQB2-229ENST00000411527 STAP2Q9UGK3 403 aa17.52■□□□□ 0.4
HLA-DQB2-229ENST00000411527 TNNQ9UQP3 1299 aa17.52■□□□□ 0.4
HLA-DQB2-229ENST00000411527 SZT2Q5T011 3432 aa17.52■□□□□ 0.4
HLA-DQB2-229ENST00000411527 BAG3O95817 575 aa17.51■□□□□ 0.39
HLA-DQB2-229ENST00000411527 TRIM32Q13049 653 aa17.51■□□□□ 0.39
HLA-DQB2-229ENST00000411527 MTMR2Q13614 643 aa17.51■□□□□ 0.39
HLA-DQB2-229ENST00000411527 NAA16Q6N069 864 aaPredicted RBP17.51■□□□□ 0.39
HLA-DQB2-229ENST00000411527 WDR18Q9BV38 432 aa17.51■□□□□ 0.39
HLA-DQB2-229ENST00000411527 HMX1Q9NP08 348 aaPredicted RBP17.51■□□□□ 0.39
HLA-DQB2-229ENST00000411527 SIPA1L1O43166 1804 aa17.51■□□□□ 0.39
HLA-DQB2-229ENST00000411527 RPTORQ8N122 1335 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 PLXNB2O15031 1838 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 A0A1W2PPC1 479 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 ASNSP08243 561 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 BACE1P56817 501 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 IRX3P78415 501 aaPredicted RBP17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 TTC39AQ5SRH9 613 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 ATF7IPQ6VMQ6 1270 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 MAPKAPK5Q8IW41 473 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 ANKLE1Q8NAG6 615 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 TGFBRAP1Q8WUH2 860 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 CLUAP1Q96AJ1 413 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 P2RX7Q99572 595 aaKnown RBP17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 TMOD4Q9NZQ9 345 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 MORF4L1Q9UBU8 362 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 CDK5RAP2Q96SN8 1893 aa17.5■□□□□ 0.39
HLA-DQB2-229ENST00000411527 RANBP2P49792 3224 aaKnown RBP17.49■□□□□ 0.39
HLA-DQB2-229ENST00000411527 BCAR3O75815 825 aa17.49■□□□□ 0.39
HLA-DQB2-229ENST00000411527 PLCG2P16885 1265 aa17.49■□□□□ 0.39
HLA-DQB2-229ENST00000411527 CYP2B6P20813 491 aa17.49■□□□□ 0.39
HLA-DQB2-229ENST00000411527 PPP4CP60510 307 aa17.49■□□□□ 0.39
HLA-DQB2-229ENST00000411527 JAG1P78504 1218 aa17.49■□□□□ 0.39
HLA-DQB2-229ENST00000411527 CCDC158Q5M9N0 1113 aa17.49■□□□□ 0.39
HLA-DQB2-229ENST00000411527 FOXP4Q8IVH2 680 aaPredicted RBP17.49■□□□□ 0.39
HLA-DQB2-229ENST00000411527 CRACR2BQ8N4Y2 399 aaPredicted RBP17.49■□□□□ 0.39
HLA-DQB2-229ENST00000411527 TRIM34Q9BYJ4 488 aa17.49■□□□□ 0.39
HLA-DQB2-229ENST00000411527 MYO5AQ9Y4I1 1855 aaKnown RBP17.49■□□□□ 0.39
HLA-DQB2-229ENST00000411527 C19orf81C9J6K1 198 aa17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 SOX1O00570 391 aaPredicted RBP17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 PEX10O60683 326 aa17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 HOXA7P31268 230 aaPredicted RBP17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 TNNI3KQ59H18 835 aa17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 ADGRA1Q86SQ6 560 aa17.48■□□□□ 0.39
HLA-DQB2-229ENST00000411527 C7orf61Q8IZ16 206 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms