RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 EEF2P13639 858 aaKnown RBP14.29□□□□□ -0.12
COL6A3-206ENST00000409809 EPHB4P54760 987 aa14.29□□□□□ -0.12
COL6A3-206ENST00000409809 ESR2Q92731 530 aa14.29□□□□□ -0.12
COL6A3-206ENST00000409809 GLT8D2Q9H1C3 349 aa14.29□□□□□ -0.12
COL6A3-206ENST00000409809 IL9RQ01113 521 aa14.29□□□□□ -0.12
COL6A3-206ENST00000409809 PPP2R5BQ15173 497 aa14.29□□□□□ -0.12
COL6A3-206ENST00000409809 CXorf38Q8TB03 319 aa14.29□□□□□ -0.12
COL6A3-206ENST00000409809 IQSEC3Q9UPP2 1182 aaPredicted RBP14.29□□□□□ -0.12
COL6A3-206ENST00000409809 CCDC82Q8N4S0 544 aa14.29□□□□□ -0.12
COL6A3-206ENST00000409809 SDSP20132 328 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 TMOD2Q9NZR1 351 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 STK38LQ9Y2H1 464 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 RASGRF2O14827 1237 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 GNA11P29992 359 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 WTAPQ15007 396 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 TMED1Q13445 227 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 CCT2P78371 535 aaKnown RBP14.28□□□□□ -0.12
COL6A3-206ENST00000409809 NBPF20Q3BBV1 942 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 IFIH1Q9BYX4 1025 aaKnown RBP14.28□□□□□ -0.12
COL6A3-206ENST00000409809 SMIM23A6NLE4 172 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 NEK2P51955 445 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 RPS6KA1Q15418 735 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 ZNF444Q8N0Y2 327 aaPredicted RBP14.28□□□□□ -0.12
COL6A3-206ENST00000409809 ENAHQ8N8S7 591 aaPredicted RBP14.28□□□□□ -0.12
COL6A3-206ENST00000409809 PHF23Q9BUL5 403 aaPredicted RBP14.28□□□□□ -0.12
COL6A3-206ENST00000409809 GEMIN8Q9NWZ8 242 aaKnown RBP14.28□□□□□ -0.12
COL6A3-206ENST00000409809 EPB41P11171 864 aaKnown RBP14.28□□□□□ -0.12
COL6A3-206ENST00000409809 SULT6B1Q6IMI4 303 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 MICU3Q86XE3 530 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 NBPF3Q9H094 633 aa14.28□□□□□ -0.12
COL6A3-206ENST00000409809 KRT2P35908 639 aa14.27□□□□□ -0.12
COL6A3-206ENST00000409809 FANCCQ00597 558 aa14.27□□□□□ -0.12
COL6A3-206ENST00000409809 METTL24Q5JXM2 366 aa14.27□□□□□ -0.12
COL6A3-206ENST00000409809 TRIML1Q8N9V2 468 aa14.27□□□□□ -0.12
COL6A3-206ENST00000409809 KAT14Q9H8E8 782 aa14.27□□□□□ -0.12
COL6A3-206ENST00000409809 NBPF6Q5VWK0 638 aa14.27□□□□□ -0.12
COL6A3-206ENST00000409809 NBPF4Q96M43 638 aa14.27□□□□□ -0.12
COL6A3-206ENST00000409809 HAUS4Q9H6D7 363 aa14.27□□□□□ -0.12
COL6A3-206ENST00000409809 FAM204AQ9H8W3 233 aa14.27□□□□□ -0.12
COL6A3-206ENST00000409809 SLC26A6Q9BXS9 759 aa14.27□□□□□ -0.13
COL6A3-206ENST00000409809 NUP160Q12769 1436 aa14.27□□□□□ -0.13
COL6A3-206ENST00000409809 KDM5AP29375 1690 aaKnown RBP14.27□□□□□ -0.13
COL6A3-206ENST00000409809 CTAGE3PQ8IX95 158 aa14.27□□□□□ -0.13
COL6A3-206ENST00000409809 KRT15P19012 456 aa14.27□□□□□ -0.13
COL6A3-206ENST00000409809 SCAF11Q99590 1463 aaKnown RBP14.27□□□□□ -0.13
COL6A3-206ENST00000409809 CACYBPQ9HB71 228 aaKnown RBP14.27□□□□□ -0.13
COL6A3-206ENST00000409809 DBF4Q9UBU7 674 aaPredicted RBP14.27□□□□□ -0.13
COL6A3-206ENST00000409809 MYH10P35580 1976 aa14.27□□□□□ -0.13
COL6A3-206ENST00000409809 BAG3O95817 575 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 IFIT5Q13325 482 aaKnown RBP14.26□□□□□ -0.13
COL6A3-206ENST00000409809 TERF2Q15554 542 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 PPANQ9NQ55 473 aaKnown RBP14.26□□□□□ -0.13
COL6A3-206ENST00000409809 AMOTL2Q9Y2J4 779 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 ANGPTL3Q9Y5C1 460 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 NLRP12P59046 1061 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 MIS18AQ9NYP9 233 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 SPOPO43791 374 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 ST5P78524 1137 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 GEN1Q17RS7 908 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 SND1Q7KZF4 910 aaKnown RBP eCLIP14.26□□□□□ -0.13
COL6A3-206ENST00000409809 TMCO5AQ8N6Q1 288 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 CCDC89Q8N998 374 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 STAMBPL1Q96FJ0 436 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 PALMDQ9NP74 551 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 PALM3A6NDB9 673 aaPredicted RBP14.26□□□□□ -0.13
COL6A3-206ENST00000409809 TTC4O95801 387 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 ARHGEF12Q9NZN5 1544 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 SERPINI2O75830 405 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 SERPINI1Q99574 410 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 HYOU1Q9Y4L1 999 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 CFAP73A6NFT4 308 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 CUTAO60888 179 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 APOEP02649 317 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 HARSP12081 509 aaKnown RBP14.26□□□□□ -0.13
COL6A3-206ENST00000409809 RILPQ96NA2 401 aa14.26□□□□□ -0.13
COL6A3-206ENST00000409809 MCMDC2Q4G0Z9 681 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 C6orf118Q5T5N4 469 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 BOLA2Q9H3K6 86 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 NUTM2FA1L443 756 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 NLRP6P59044 892 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 NUTM2GQ5VZR2 741 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 BRF1Q92994 677 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 PDE1AP54750 535 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 SEPT8Q92599 483 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 STX10O60499 249 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 GUCY2CP25092 1073 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 AFMP43652 599 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 PDXDC1Q6P996 788 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 ARHGEF18Q6ZSZ5 1173 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 KDM2BQ8NHM5 1336 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 HNRNPCL1O60812 293 aaKnown RBP14.25□□□□□ -0.13
COL6A3-206ENST00000409809 ZKSCAN3Q9BRR0 538 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 MRPL40Q9NQ50 206 aaKnown RBP14.25□□□□□ -0.13
COL6A3-206ENST00000409809 NLRP2Q9NX02 1062 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 STOML1Q9UBI4 398 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 ZNF530Q6P9A1 599 aaPredicted RBP14.25□□□□□ -0.13
COL6A3-206ENST00000409809 RSPH3Q86UC2 560 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 CABP2Q9NPB3 220 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 MYO1CO00159 1063 aa14.25□□□□□ -0.13
COL6A3-206ENST00000409809 ALDH1L1O75891 902 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms