RNA–Protein interactions for RNA: ENST00000403538.1

TPT1P4-201, Transcript of tumor protein, translationally-controlled 1 pseudogene 4, humanhuman

BASIC

Gene TPT1P4, Length 519 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1P4-201ENST00000403538 FOXP2O15409 715 aa10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 IDH1O75874 414 aaKnown RBP10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 LARGE1O95461 756 aa10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 CAVIN2O95810 425 aa10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 PDIA3P30101 505 aaKnown RBP10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 ST3GAL1Q11201 340 aa10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 NFX1Q12986 1120 aaKnown RBP10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 UVSSAQ2YD98 709 aa10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 TBC1D9BQ66K14 1250 aa10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 LRSAM1Q6UWE0 723 aa10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 STOX1Q6ZVD7 989 aa10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 FLAD1Q8NFF5 587 aa10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 ARHGEF1Q92888 912 aaKnown RBP10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 CCDC85AQ96PX6 553 aaPredicted RBP10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 PIH1D3Q9NQM4 214 aaKnown RBP10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 SEC31BQ9NQW1 1179 aa10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 ANGEL1Q9UNK9 670 aaKnown RBP10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 NDUFB9Q9Y6M9 179 aa10.88□□□□□ -0.67
TPT1P4-201ENST00000403538 TIAM2Q8IVF5 1701 aa10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 KIAA1551Q9HCM1 1747 aa10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 PLSCR1O15162 318 aa10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 XRCC6P12956 609 aaKnown RBP eCLIP10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 CPA1P15085 419 aa10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 DNAJB2P25686 324 aa10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 SART3Q15020 963 aaKnown RBP10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 ZSCAN23Q3MJ62 389 aa10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 HS1BP3Q53T59 392 aa10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 PAXIP1Q6ZW49 1069 aaPredicted RBP10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 NOL8Q76FK4 1167 aaKnown RBP10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 USP48Q86UV5 1035 aa10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 GPT2Q8TD30 523 aa10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 BRIP1Q9BX63 1249 aa10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 CASZ1Q86V15 1759 aa10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 UBR3Q6ZT12 1888 aa10.87□□□□□ -0.67
TPT1P4-201ENST00000403538 CHD4Q14839 1912 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 CCDC196A0A1B0GTZ2 297 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 KLRG2A4D1S0 409 aaPredicted RBP10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 NR1I2O75469 434 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 BBOX1O75936 387 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 FGRP09769 529 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 TM4SF1P30408 202 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 HOXA10P31260 410 aaPredicted RBP10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 HSPA1LP34931 641 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 SCRN1Q12765 414 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 CRY2Q49AN0 593 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 PLA2G2CQ5R387 149 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 AKNAD1Q5T1N1 836 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 CCDC183Q5T5S1 534 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 ZNF772Q68DY9 489 aaPredicted RBP10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 BRAPQ7Z569 592 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 VPS37DQ86XT2 251 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 IFNL3Q8IZI9 196 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 NSUN7Q8NE18 718 aaKnown RBP10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 STAG1Q8WVM7 1258 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 WASF1Q92558 559 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 ZNF396Q96N95 335 aaPredicted RBP10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 SLC6A16Q9GZN6 736 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 NAPBQ9H115 298 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 QTRT2Q9H974 415 aaKnown RBP10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 LRP2BPQ9P2M1 347 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 DACH1Q9UI36 760 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 C4AP0C0L4 1744 aa10.86□□□□□ -0.67
TPT1P4-201ENST00000403538 CCDC88AQ3V6T2 1871 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 MYO5AQ9Y4I1 1855 aaKnown RBP10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 H3BQV1 296 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 PRC1O43663 620 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 HIBADHP31937 336 aaKnown RBP10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 CCDC173Q0VFZ6 552 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 GRAPQ13588 217 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 CTC1Q2NKJ3 1217 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 CCDC178Q5BJE1 867 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 CAVIN1Q6NZI2 390 aaKnown RBP10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 MFSD6Q6ZSS7 791 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 KRT27Q7Z3Y8 459 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 FAM177A1Q8N128 213 aaPredicted RBP10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 MAGEB6Q8N7X4 407 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 NECAB1Q8N987 351 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 WDR66Q8TBY9 1149 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 GRAPLQ8TC17 118 aaPredicted RBP10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 FAM84BQ96KN1 310 aaPredicted RBP10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 CRAMP1Q96RY5 1269 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 GZF1Q9H116 711 aaPredicted RBP10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 TMEM134Q9H6X4 195 aa10.85□□□□□ -0.67
TPT1P4-201ENST00000403538 STK36Q9NRP7 1315 aa10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 MYH13Q9UKX3 1938 aa10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 VPS37CA5D8V6 355 aaPredicted RBP10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 GSG1L2A8MUP6 293 aa10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 LDHCP07864 332 aa10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 SMCPP49901 116 aaPredicted RBP10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 GSTO1P78417 241 aa10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 ST5P78524 1137 aa10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 SYNE3Q6ZMZ3 975 aa10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 CNBD1Q8NA66 436 aa10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 HELBQ8NG08 1087 aaPredicted RBP10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 PPP1R9BQ96SB3 815 aa10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 ATP8A2Q9NTI2 1148 aa10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 DDX19AQ9NUU7 478 aaKnown RBP10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 TOR4AQ9NXH8 423 aa10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 WWC3Q9ULE0 1092 aa10.84□□□□□ -0.67
TPT1P4-201ENST00000403538 TAF6LQ9Y6J9 622 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms