RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 NR5A1Q13285 461 aa6.98□□□□□ -1.29
ERCC4-202ENST00000389138 IL31Q6EBC2 164 aa6.98□□□□□ -1.29
ERCC4-202ENST00000389138 VASH1Q7L8A9 365 aaPredicted RBP6.98□□□□□ -1.29
ERCC4-202ENST00000389138 HDGFL2Q7Z4V5 671 aaPredicted RBP6.98□□□□□ -1.29
ERCC4-202ENST00000389138 TSEN2Q8NCE0 465 aaKnown RBP6.98□□□□□ -1.29
ERCC4-202ENST00000389138 RSPH1Q8WYR4 309 aa6.98□□□□□ -1.29
ERCC4-202ENST00000389138 ASPSCR1Q9BZE9 553 aa6.98□□□□□ -1.29
ERCC4-202ENST00000389138 SAP130Q9H0E3 1048 aa6.98□□□□□ -1.29
ERCC4-202ENST00000389138 GJA3Q9Y6H8 435 aa6.98□□□□□ -1.29
ERCC4-202ENST00000389138 WASF2Q9Y6W5 498 aa6.98□□□□□ -1.29
ERCC4-202ENST00000389138 NRXN3Q9Y4C0 1643 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 CLGNO14967 610 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 GFRA3O60609 400 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 ADH1CP00326 375 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 EPB42P16452 691 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 DDX10Q13206 875 aaKnown RBP6.97□□□□□ -1.29
ERCC4-202ENST00000389138 SKAP1Q86WV1 359 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 TRIM50Q86XT4 487 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 UBR7Q8N806 425 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 IRX2Q9BZI1 471 aaPredicted RBP6.97□□□□□ -1.29
ERCC4-202ENST00000389138 TNS1Q9HBL0 1735 aaKnown RBP6.97□□□□□ -1.29
ERCC4-202ENST00000389138 hCG_1984214I3L0E3 225 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 GOLIM4O00461 696 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 KATNA1O75449 491 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 ALDH1A1P00352 501 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 ARID5BQ14865 1188 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 RNF20Q5VTR2 975 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 ALG1LQ6GMV1 187 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 CCDC70Q6NSX1 233 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 SEPT12Q8IYM1 358 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 RTFDC1Q9BY42 306 aaPredicted RBP6.97□□□□□ -1.29
ERCC4-202ENST00000389138 RETREG1Q9H6L5 497 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 AKAP2Q9Y2D5 859 aa6.97□□□□□ -1.29
ERCC4-202ENST00000389138 PTPRUQ92729 1446 aa6.96□□□□□ -1.29
ERCC4-202ENST00000389138 USP31Q70CQ4 1352 aa6.96□□□□□ -1.3
ERCC4-202ENST00000389138 PRRT4C9JH25 899 aa6.96□□□□□ -1.3
ERCC4-202ENST00000389138 DGAT1O75907 488 aa6.96□□□□□ -1.3
ERCC4-202ENST00000389138 F2P00734 622 aa6.96□□□□□ -1.3
ERCC4-202ENST00000389138 NEK3P51956 506 aa6.96□□□□□ -1.3
ERCC4-202ENST00000389138 GEMIN4P57678 1058 aaKnown RBP6.96□□□□□ -1.3
ERCC4-202ENST00000389138 HLTFQ14527 1009 aaKnown RBP eCLIP6.96□□□□□ -1.3
ERCC4-202ENST00000389138 ZSCAN30Q86W11 494 aa6.96□□□□□ -1.3
ERCC4-202ENST00000389138 MSL3Q8N5Y2 521 aaKnown RBP6.96□□□□□ -1.3
ERCC4-202ENST00000389138 DDX17Q92841 729 aaKnown RBP6.96□□□□□ -1.3
ERCC4-202ENST00000389138 TLL2Q9Y6L7 1015 aa6.96□□□□□ -1.3
ERCC4-202ENST00000389138 MYOM2P54296 1465 aa6.96□□□□□ -1.3
ERCC4-202ENST00000389138 STAT3P40763 770 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 GTF2IP78347 998 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 DHX9Q08211 1270 aaKnown RBP6.95□□□□□ -1.3
ERCC4-202ENST00000389138 AXDND1Q5T1B0 1012 aaPredicted RBP6.95□□□□□ -1.3
ERCC4-202ENST00000389138 ERMP1Q7Z2K6 904 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 KRT77Q7Z794 578 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 KCTD15Q96SI1 283 aaPredicted RBP6.95□□□□□ -1.3
ERCC4-202ENST00000389138 NOB1Q9ULX3 412 aaKnown RBP6.95□□□□□ -1.3
ERCC4-202ENST00000389138 EFR3BQ9Y2G0 817 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 PLCH1Q4KWH8 1693 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 CAMTA1Q9Y6Y1 1673 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 RALGAPBQ86X10 1494 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 KANK1Q14678 1352 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 ESPNB1AK53 854 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 TCEA3O75764 348 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 SERINC2Q96SA4 455 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 C9orf78Q9NZ63 289 aaPredicted RBP6.95□□□□□ -1.3
ERCC4-202ENST00000389138 EVLQ9UI08 416 aaPredicted RBP6.95□□□□□ -1.3
ERCC4-202ENST00000389138 IPPQ9Y573 584 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 DAPK1P53355 1430 aa6.95□□□□□ -1.3
ERCC4-202ENST00000389138 KIF15Q9NS87 1388 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 ALG1L2C9J202 215 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 CBFA2T2O43439 604 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 SMPD1P17405 629 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 SERPINB3P29508 390 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 CASP2P42575 452 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 MAP7D1Q3KQU3 841 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 ALFQ53S48 1182 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 C16orf54Q6UWD8 224 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 ANKRD42Q8N9B4 389 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 TIFAQ96CG3 184 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 TRMT2BQ96GJ1 504 aaKnown RBP6.94□□□□□ -1.3
ERCC4-202ENST00000389138 CDH19Q9H159 772 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 CWC25Q9NXE8 425 aaPredicted RBP6.94□□□□□ -1.3
ERCC4-202ENST00000389138 ADGRL3Q9HAR2 1447 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 NWD2Q9ULI1 1742 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 RPRD2Q5VT52 1461 aaKnown RBP6.94□□□□□ -1.3
ERCC4-202ENST00000389138 IQGAP3Q86VI3 1631 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 ABCC5O15440 1437 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 IGHDP01880 384 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 PMLP29590 882 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 GRM5P41594 1212 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 ZBED6P86452 979 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 NFKB2Q00653 900 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 ANO1Q5XXA6 986 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 PCDHGA11Q9Y5H2 935 aa6.94□□□□□ -1.3
ERCC4-202ENST00000389138 CHD4Q14839 1912 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 A0A087X0B3 334 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 J3QL48 77 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 RASGRP1O95267 797 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 ASMTLO95671 621 aa6.93□□□□□ -1.3
ERCC4-202ENST00000389138 IFIT2P09913 472 aaKnown RBP6.93□□□□□ -1.3
ERCC4-202ENST00000389138 SARSP49591 514 aaKnown RBP6.93□□□□□ -1.3
ERCC4-202ENST00000389138 FAM160A1Q05DH4 1040 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms