RNA–Protein interactions for RNA: ENST00000381227.5

POLR2B-202, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene POLR2B, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-202ENST00000381227 PDCL2Q8N4E4 241 aa7.57□□□□□ -1.2
POLR2B-202ENST00000381227 RTL9Q8NET4 1388 aa7.57□□□□□ -1.2
POLR2B-202ENST00000381227 XPO4Q9C0E2 1151 aaKnown RBP7.57□□□□□ -1.2
POLR2B-202ENST00000381227 NYXQ9GZU5 481 aa7.57□□□□□ -1.2
POLR2B-202ENST00000381227 LY9Q9HBG7 655 aa7.57□□□□□ -1.2
POLR2B-202ENST00000381227 JCADQ9P266 1359 aa7.57□□□□□ -1.2
POLR2B-202ENST00000381227 CUTAO60888 179 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 NR5A1Q13285 461 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 ARID5BQ14865 1188 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 FAM47AQ5JRC9 791 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 TMX4Q9H1E5 349 aaPredicted RBP7.56□□□□□ -1.2
POLR2B-202ENST00000381227 KCNF1Q9H3M0 494 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 CCNL1Q9UK58 526 aaPredicted RBP7.56□□□□□ -1.2
POLR2B-202ENST00000381227 MRC1P22897 1456 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 BCL9O00512 1426 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 UBE2Q2LH0YL09 131 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 TPM1P09493 284 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 TXLNAP40222 546 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 LIFRP42702 1097 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 MYL5Q02045 173 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 ZNF444Q8N0Y2 327 aaPredicted RBP7.56□□□□□ -1.2
POLR2B-202ENST00000381227 KIF18AQ8NI77 898 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.56□□□□□ -1.2
POLR2B-202ENST00000381227 KAT14Q9H8E8 782 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 EPB41L4AQ9HCS5 686 aaPredicted RBP7.56□□□□□ -1.2
POLR2B-202ENST00000381227 MARCH6O60337 910 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 CAMTA2O94983 1202 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 KRT2P35908 639 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 SNW1Q13573 536 aaKnown RBP7.56□□□□□ -1.2
POLR2B-202ENST00000381227 ANKRD20A12PQ8NF67 263 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 RPGRQ92834 1020 aaKnown RBP7.56□□□□□ -1.2
POLR2B-202ENST00000381227 MRFAP1L1Q96HT8 127 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 SLIT2O94813 1529 aa7.56□□□□□ -1.2
POLR2B-202ENST00000381227 FANCCQ00597 558 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 UBE4AQ14139 1066 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 ZNF174Q15697 407 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 INTS5Q6P9B9 1019 aaKnown RBP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 PAXIP1Q6ZW49 1069 aaPredicted RBP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 LRRC8AQ8IWT6 810 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 CCDC150Q8NCX0 1101 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 MNS1Q8NEH6 495 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 ZNF512BQ96KM6 892 aaPredicted RBP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 SRP68Q9UHB9 627 aaKnown RBP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 DISP2A7MBM2 1401 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 SPATA31A5Q5VU36 1347 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 SPATA31A7Q8IWB4 1347 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 WDR19Q8NEZ3 1342 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 FMNL1O95466 1100 aaPredicted RBP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 IFNAR1P17181 557 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 CCDC144BQ3MJ40 725 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 IGDCC4Q8TDY8 1250 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 CPLX3Q8WVH0 158 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 CELF1Q92879 486 aaKnown RBP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 ZSCAN10Q96SZ4 725 aaPredicted RBP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 USP21Q9UK80 565 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 V9GYY5 206 aaPredicted RBP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 NRAPQ86VF7 1730 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 WDHD1O75717 1129 aaPredicted RBP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 KIF5BP33176 963 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 GUCY1A2P33402 732 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 STX17P56962 302 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 ZNF827Q17R98 1081 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 FILIP1LQ4L180 1135 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 SPTY2D1Q68D10 685 aaPredicted RBP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 ILDR1Q86SU0 546 aaPredicted RBP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 PLA2G4DQ86XP0 818 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 VGLL2Q8N8G2 317 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 ANKRD2Q9GZV1 360 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 SIPA1L3O60292 1781 aaPredicted RBP7.55□□□□□ -1.2
POLR2B-202ENST00000381227 PKD1L3Q7Z443 1732 aa7.55□□□□□ -1.2
POLR2B-202ENST00000381227 VWA3AA6NCI4 1184 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 IQCB1Q15051 598 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 PTPN21Q16825 1174 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 TMX1Q9H3N1 280 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 THRAP3Q9Y2W1 955 aaKnown RBP7.54□□□□□ -1.2
POLR2B-202ENST00000381227 PAXBP1Q9Y5B6 917 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 PCDHA5Q9Y5H7 936 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 RIC1Q4ADV7 1423 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 COL14A1Q05707 1796 aaKnown RBP7.54□□□□□ -1.2
POLR2B-202ENST00000381227 AFF2P51816 1311 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 SALL1Q9NSC2 1324 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 CCDC194A0A1B0GVG4 234 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 FOXP2O15409 715 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 NTSR2O95665 410 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 BAG3O95817 575 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 MMP1P03956 469 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 LDHBP07195 334 aaKnown RBP7.54□□□□□ -1.2
POLR2B-202ENST00000381227 TSPY3P0CV98 308 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 TSPY8P0CW00 308 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 CALM1P0DP23 149 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 CALM2P0DP24 149 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 CALM3P0DP25 149 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 MCM7P33993 719 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 ATP2B2Q01814 1243 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 DHX8Q14562 1220 aaKnown RBP7.54□□□□□ -1.2
POLR2B-202ENST00000381227 ALX1Q15699 326 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 KANK3Q6NY19 840 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 SGMS1Q86VZ5 419 aa7.54□□□□□ -1.2
POLR2B-202ENST00000381227 PPFIBP1Q86W92 1011 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms