RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 TBC1D9BQ66K14 1250 aa13.49□□□□□ -0.25
PACSIN1-202ENST00000374043 TEX11Q8IYF3 940 aa13.49□□□□□ -0.25
PACSIN1-202ENST00000374043 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
PACSIN1-202ENST00000374043 ERVV-1B6SEH8 477 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 YEATS4O95619 227 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 CASP1P29466 404 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 NAPAP54920 295 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 CPVLQ9H3G5 476 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 ZNF500O60304 480 aaPredicted RBP13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 USP17L8P0C7I0 530 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 FDPSP14324 419 aaKnown RBP13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 EIF5P55010 431 aaKnown RBP13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 PDLIM2Q96JY6 352 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 RTEL1Q9NZ71 1219 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 N4BP3O15049 544 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 LDHCP07864 332 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 MYL5Q02045 173 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 TRIM28Q13263 835 aaKnown RBP13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 MSL1Q68DK7 614 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 PCDHA5Q9Y5H7 936 aa13.48□□□□□ -0.25
PACSIN1-202ENST00000374043 KNDC1Q76NI1 1749 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 CSF1RP07333 972 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 GNG11P61952 73 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 ST5P78524 1137 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 LETM2Q2VYF4 491 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 SMYD4Q8IYR2 804 aaPredicted RBP13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 NUP88Q99567 741 aaPredicted RBP13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 ATP1A3P13637 1013 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 PRKCSHP14314 528 aaPredicted RBP13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 GSDMDP57764 484 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 TSGA10IPQ3SY00 556 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 RILPL1Q5EBL4 403 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 ZSCAN10Q96SZ4 725 aaPredicted RBP13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 GPCPD1Q9NPB8 672 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 NFE2L3Q9Y4A8 694 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 GSG1L2A8MUP6 293 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 DYNC1I1O14576 645 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 DNA2P51530 1060 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 CCDC178Q5BJE1 867 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 ATL3Q6DD88 541 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 OXER1Q8TDS5 423 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 FANCLQ9NW38 375 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 PCDHB6Q9Y5E3 794 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 COL15A1P39059 1388 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 SMIM22K7EJ46 135 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 PLEKHA8P1O95397 391 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 STAT6P42226 847 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 TEX35Q5T0J7 233 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 ZNF804AQ7Z570 1209 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 SMARCC2Q8TAQ2 1214 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 ANKRD2Q9GZV1 360 aa13.47□□□□□ -0.25
PACSIN1-202ENST00000374043 ARHGAP29Q52LW3 1261 aa13.46□□□□□ -0.25
PACSIN1-202ENST00000374043 ZC3H12CQ9C0D7 883 aaKnown RBP13.46□□□□□ -0.25
PACSIN1-202ENST00000374043 MAP7D2Q96T17 732 aa13.46□□□□□ -0.25
PACSIN1-202ENST00000374043 MINPP1Q9UNW1 487 aa13.46□□□□□ -0.25
PACSIN1-202ENST00000374043 GTF2IP78347 998 aa13.46□□□□□ -0.26
PACSIN1-202ENST00000374043 TCP10Q12799 353 aa13.46□□□□□ -0.26
PACSIN1-202ENST00000374043 STIM1Q13586 685 aa13.46□□□□□ -0.26
PACSIN1-202ENST00000374043 SLC39A14Q15043 492 aa13.46□□□□□ -0.26
PACSIN1-202ENST00000374043 SKIDA1Q1XH10 827 aa13.46□□□□□ -0.26
PACSIN1-202ENST00000374043 JAKMIP3Q5VZ66 844 aa13.46□□□□□ -0.26
PACSIN1-202ENST00000374043 UBXN4Q92575 508 aa13.46□□□□□ -0.26
PACSIN1-202ENST00000374043 PRIMPOLQ96LW4 560 aa13.46□□□□□ -0.26
PACSIN1-202ENST00000374043 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.46□□□□□ -0.26
PACSIN1-202ENST00000374043 LZTFL1Q9NQ48 299 aa13.46□□□□□ -0.26
PACSIN1-202ENST00000374043 ZNF804BA4D1E1 1349 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 NLRP12P59046 1061 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 LRP10Q7Z4F1 713 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 SLC44A5Q8NCS7 719 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 PDCL3Q9H2J4 239 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 RTL9Q8NET4 1388 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 FOXN1O15353 648 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 KLRK1P26718 216 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 SCNN1DP51172 638 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 MECOMQ03112 1051 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 TTC38Q5R3I4 469 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 VPS16Q9H269 839 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 ZNF287Q9HBT7 754 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 OVOS2A0A0G2JMS6 1433 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 AP5Z1O43299 807 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 CUTAO60888 179 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 CMA1P23946 247 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 TNNI2P48788 182 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 ADKP55263 362 aaKnown RBP13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 DOK7Q18PE1 504 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 EPB41L4AQ9HCS5 686 aaPredicted RBP13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 CPDO75976 1380 aa13.45□□□□□ -0.26
PACSIN1-202ENST00000374043 POSTNQ15063 836 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 UBA5Q9GZZ9 404 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 FAM205CA6NFA0 338 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 CCDC144BQ3MJ40 725 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 MFSD14BQ5SR56 506 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 LY9Q9HBG7 655 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 TCP11L1Q9NUJ3 509 aa13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 WDHD1O75717 1129 aaPredicted RBP13.44□□□□□ -0.26
PACSIN1-202ENST00000374043 TRIM47Q96LD4 638 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms