RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 ZHX3Q9H4I2 956 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 ZNF804BA4D1E1 1349 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 CTAGE5O15320 804 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 FOXN1O15353 648 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 NTSR2O95665 410 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 SFPQP23246 707 aaKnown RBP eCLIP15.15■□□□□ 0.02
NCDN-203ENST00000373253 GTF2IP78347 998 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 NYXQ9GZU5 481 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 RCOR1Q9UKL0 485 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 HPS5Q9UPZ3 1129 aa15.15■□□□□ 0.02
NCDN-203ENST00000373253 ZNF75DP51815 510 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 ZMYM6O95789 1325 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 USP17L3A6NCW0 530 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 USP17L4A6NCW7 530 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 USP17L1Q7RTZ2 530 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 BRAPQ7Z569 592 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 SMARCC2Q8TAQ2 1214 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 PCDHB6Q9Y5E3 794 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 CDHR2Q9BYE9 1310 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 SLIT3O75094 1523 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 CCDC194A0A1B0GVG4 234 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 GNAT2P19087 354 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 UBASH3AP57075 661 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 ADALQ6DHV7 355 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 SMYD4Q8IYR2 804 aaPredicted RBP15.14■□□□□ 0.01
NCDN-203ENST00000373253 TMEM87AQ8NBN3 555 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 KCNB2Q92953 911 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 BLZF1Q9H2G9 400 aa15.14■□□□□ 0.01
NCDN-203ENST00000373253 TRIM75PA6NK02 468 aa15.13■□□□□ 0.01
NCDN-203ENST00000373253 LY9Q9HBG7 655 aa15.13■□□□□ 0.01
NCDN-203ENST00000373253 WDHD1O75717 1129 aaPredicted RBP15.13■□□□□ 0.01
NCDN-203ENST00000373253 ATP1A3P13637 1013 aa15.13■□□□□ 0.01
NCDN-203ENST00000373253 CCDC96Q2M329 555 aa15.13■□□□□ 0.01
NCDN-203ENST00000373253 MFSD14BQ5SR56 506 aa15.13■□□□□ 0.01
NCDN-203ENST00000373253 TEX11Q8IYF3 940 aa15.13■□□□□ 0.01
NCDN-203ENST00000373253 SEPT12Q8IYM1 358 aa15.13■□□□□ 0.01
NCDN-203ENST00000373253 SERTAD1Q9UHV2 236 aa15.13■□□□□ 0.01
NCDN-203ENST00000373253 BAG3O95817 575 aa15.12■□□□□ 0.01
NCDN-203ENST00000373253 KRI1Q8N9T8 703 aaKnown RBP15.12■□□□□ 0.01
NCDN-203ENST00000373253 SMARCE1Q969G3 411 aa15.12■□□□□ 0.01
NCDN-203ENST00000373253 KIAA1468Q9P260 1216 aa15.12■□□□□ 0.01
NCDN-203ENST00000373253 CACNA1FO60840 1977 aa15.12■□□□□ 0.01
NCDN-203ENST00000373253 GRIN1Q05586 938 aa15.12■□□□□ 0.01
NCDN-203ENST00000373253 ZSCAN10Q96SZ4 725 aaPredicted RBP15.12■□□□□ 0.01
NCDN-203ENST00000373253 XPO4Q9C0E2 1151 aaKnown RBP15.12■□□□□ 0.01
NCDN-203ENST00000373253 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
NCDN-203ENST00000373253 NOSTRINQ8IVI9 506 aa15.12■□□□□ 0.01
NCDN-203ENST00000373253 PLA2G12BQ9BX93 195 aa15.12■□□□□ 0.01
NCDN-203ENST00000373253 UBA5Q9GZZ9 404 aa15.12■□□□□ 0.01
NCDN-203ENST00000373253 ST5P78524 1137 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 USP49Q70CQ1 688 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 CCDC112Q8NEF3 446 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 ZC3H12CQ9C0D7 883 aaKnown RBP15.11■□□□□ 0.01
NCDN-203ENST00000373253 ZSWIM4Q9H7M6 989 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 QTRT2Q9H974 415 aaKnown RBP15.11■□□□□ 0.01
NCDN-203ENST00000373253 BCL9O00512 1426 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 CACNB3P54284 484 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 LONRF3Q496Y0 759 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 SOGA3Q5TF21 947 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 CRACR2BQ8N4Y2 399 aaPredicted RBP15.11■□□□□ 0.01
NCDN-203ENST00000373253 CACTINQ8WUQ7 758 aaKnown RBP15.11■□□□□ 0.01
NCDN-203ENST00000373253 PDLIM2Q96JY6 352 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 GPCPD1Q9NPB8 672 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 FOXP2O15409 715 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 DEXIO95424 95 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 TOP1P11387 765 aaKnown RBP15.11■□□□□ 0.01
NCDN-203ENST00000373253 UBE4AQ14139 1066 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 PTPN14Q15678 1187 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 TMTC2Q8N394 836 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 PCDHA5Q9Y5H7 936 aa15.11■□□□□ 0.01
NCDN-203ENST00000373253 ELP1O95163 1332 aa15.1■□□□□ 0.01
NCDN-203ENST00000373253 DCCP43146 1447 aa15.1■□□□□ 0.01
NCDN-203ENST00000373253 FAM170AA1A519 330 aa15.1■□□□□ 0.01
NCDN-203ENST00000373253 CLEC10AQ8IUN9 316 aa15.1■□□□□ 0.01
NCDN-203ENST00000373253 IGDCC4Q8TDY8 1250 aa15.1■□□□□ 0.01
NCDN-203ENST00000373253 EPSTI1Q96J88 318 aa15.1■□□□□ 0.01
NCDN-203ENST00000373253 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.1■□□□□ 0.01
NCDN-203ENST00000373253 RTEL1Q9NZ71 1219 aa15.1■□□□□ 0.01
NCDN-203ENST00000373253 TPM3P06753 285 aa15.1■□□□□ 0.01
NCDN-203ENST00000373253 ARID4AP29374 1257 aaPredicted RBP15.1■□□□□ 0.01
NCDN-203ENST00000373253 MXD3Q9BW11 206 aa15.1■□□□□ 0.01
NCDN-203ENST00000373253 NBPF3Q9H094 633 aa15.1■□□□□ 0.01
NCDN-203ENST00000373253 BSDC1Q9NW68 430 aaPredicted RBP15.1■□□□□ 0.01
NCDN-203ENST00000373253 FAM196BA6NMK8 535 aa15.09■□□□□ 0.01
NCDN-203ENST00000373253 KRT2P35908 639 aa15.09■□□□□ 0.01
NCDN-203ENST00000373253 CCDC144BQ3MJ40 725 aa15.09■□□□□ 0.01
NCDN-203ENST00000373253 ZNF804AQ7Z570 1209 aa15.09■□□□□ 0.01
NCDN-203ENST00000373253 ENAHQ8N8S7 591 aaPredicted RBP15.09■□□□□ 0.01
NCDN-203ENST00000373253 ANKRD2Q9GZV1 360 aa15.09■□□□□ 0.01
NCDN-203ENST00000373253 SPATA31A5Q5VU36 1347 aa15.09■□□□□ 0.01
NCDN-203ENST00000373253 SPATA31A7Q8IWB4 1347 aa15.09■□□□□ 0.01
NCDN-203ENST00000373253 NOM1Q5C9Z4 860 aaKnown RBP15.09■□□□□ 0.01
NCDN-203ENST00000373253 JAKMIP3Q5VZ66 844 aa15.09■□□□□ 0.01
NCDN-203ENST00000373253 RASGRP2Q7LDG7 609 aa15.09■□□□□ 0.01
NCDN-203ENST00000373253 FRMPD2Q68DX3 1309 aaPredicted RBP15.09■□□□□ 0.01
NCDN-203ENST00000373253 SMTNL1A8MU46 457 aa15.08■□□□□ 0.01
NCDN-203ENST00000373253 LETM2Q2VYF4 491 aa15.08■□□□□ 0.01
NCDN-203ENST00000373253 VGLL2Q8N8G2 317 aa15.08■□□□□ 0.01
NCDN-203ENST00000373253 CLSTN1O94985 981 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms