RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 SPDYE2BA6NHP3 402 aa21.7■■□□□ 1.07
VEGFA-206ENST00000372077 NPM3O75607 178 aaKnown RBP21.7■■□□□ 1.07
VEGFA-206ENST00000372077 SPDYE6P0CI01 402 aa21.7■■□□□ 1.07
VEGFA-206ENST00000372077 ZNF280AP59817 542 aaPredicted RBP21.7■■□□□ 1.07
VEGFA-206ENST00000372077 NKX2-3Q8TAU0 364 aa21.7■■□□□ 1.07
VEGFA-206ENST00000372077 ZBED3Q96IU2 234 aaPredicted RBP21.7■■□□□ 1.07
VEGFA-206ENST00000372077 TCEANC2Q96MN5 208 aa21.7■■□□□ 1.07
VEGFA-206ENST00000372077 WDR19Q8NEZ3 1342 aa21.7■■□□□ 1.06
VEGFA-206ENST00000372077 EVX2Q03828 476 aa21.7■■□□□ 1.06
VEGFA-206ENST00000372077 FBXL16Q8N461 479 aa21.7■■□□□ 1.06
VEGFA-206ENST00000372077 AGXT2Q9BYV1 514 aa21.7■■□□□ 1.06
VEGFA-206ENST00000372077 KRT23Q9C075 422 aa21.7■■□□□ 1.06
VEGFA-206ENST00000372077 ROBO3Q96MS0 1386 aa21.7■■□□□ 1.06
VEGFA-206ENST00000372077 TOB2Q14106 344 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-206ENST00000372077 DLGAP5Q15398 846 aa21.7■■□□□ 1.06
VEGFA-206ENST00000372077 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.7■■□□□ 1.063e-16■□□□□ 9.2
VEGFA-206ENST00000372077 MCM5P33992 734 aa21.69■■□□□ 1.06
VEGFA-206ENST00000372077 ANKRD1Q15327 319 aa21.69■■□□□ 1.06
VEGFA-206ENST00000372077 AMOTL1Q8IY63 956 aa21.69■■□□□ 1.06
VEGFA-206ENST00000372077 MYH1P12882 1939 aa21.69■■□□□ 1.06
VEGFA-206ENST00000372077 GMPSP49915 693 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-206ENST00000372077 ANTXR2P58335 489 aa21.69■■□□□ 1.06
VEGFA-206ENST00000372077 TDRD3Q9H7E2 651 aaKnown RBP21.69■■□□□ 1.06
VEGFA-206ENST00000372077 SAP30BPQ9UHR5 308 aaKnown RBP21.69■■□□□ 1.06
VEGFA-206ENST00000372077 GJA3Q9Y6H8 435 aa21.69■■□□□ 1.06
VEGFA-206ENST00000372077 B4E1Z4 1266 aa21.68■■□□□ 1.06
VEGFA-206ENST00000372077 POLR3DP05423 398 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-206ENST00000372077 SLC3A2P08195 630 aaKnown RBP21.68■■□□□ 1.06
VEGFA-206ENST00000372077 NFIAQ12857 509 aa21.68■■□□□ 1.06
VEGFA-206ENST00000372077 Q6ZUG5 572 aa21.68■■□□□ 1.06
VEGFA-206ENST00000372077 OSBPL5Q9H0X9 879 aaPredicted RBP21.68■■□□□ 1.06
VEGFA-206ENST00000372077 LIMCH1Q9UPQ0 1083 aa21.68■■□□□ 1.06
VEGFA-206ENST00000372077 GOLGA6L22H0YM25 854 aa21.68■■□□□ 1.06
VEGFA-206ENST00000372077 PLCD1P51178 756 aa21.68■■□□□ 1.06
VEGFA-206ENST00000372077 PICALMQ13492 652 aa21.68■■□□□ 1.06
VEGFA-206ENST00000372077 CYB5R4Q7L1T6 521 aa21.68■■□□□ 1.06
VEGFA-206ENST00000372077 RNF214Q8ND24 703 aa21.68■■□□□ 1.06
VEGFA-206ENST00000372077 TMX3Q96JJ7 454 aa21.68■■□□□ 1.06
VEGFA-206ENST00000372077 RNF181Q9P0P0 153 aa21.68■■□□□ 1.06
VEGFA-206ENST00000372077 GPR162Q16538 588 aa21.67■■□□□ 1.06
VEGFA-206ENST00000372077 FAM198AQ9UFP1 575 aa21.67■■□□□ 1.06
VEGFA-206ENST00000372077 PRC1O43663 620 aa21.67■■□□□ 1.06
VEGFA-206ENST00000372077 ORC4O43929 436 aa21.67■■□□□ 1.06
VEGFA-206ENST00000372077 MYOZ2Q9NPC6 264 aa21.67■■□□□ 1.06
VEGFA-206ENST00000372077 SHTN1A0MZ66 631 aa21.66■■□□□ 1.06
VEGFA-206ENST00000372077 CHST3Q7LGC8 479 aa21.66■■□□□ 1.06
VEGFA-206ENST00000372077 GPC2Q8N158 579 aa21.66■■□□□ 1.06
VEGFA-206ENST00000372077 STK11IPQ8N1F8 1099 aa21.66■■□□□ 1.06
VEGFA-206ENST00000372077 ZSWIM5Q9P217 1185 aa21.66■■□□□ 1.06
VEGFA-206ENST00000372077 ZDHHC9Q9Y397 364 aa21.66■■□□□ 1.06
VEGFA-206ENST00000372077 LRRC2Q9BYS8 371 aa21.66■■□□□ 1.06
VEGFA-206ENST00000372077 GRIN3BO60391 1043 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 KDM4AO75164 1064 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 C9orf131Q5VYM1 1079 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 CNOT7Q9UIV1 285 aaKnown RBP21.65■■□□□ 1.06
VEGFA-206ENST00000372077 NT5C2P49902 561 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 CACNB3P54284 484 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 PDE4BQ07343 736 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 SPDYE2Q495Y8 402 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 ZSCAN31Q96LW9 406 aaPredicted RBP21.65■■□□□ 1.06
VEGFA-206ENST00000372077 ZNF70Q9UC06 446 aaPredicted RBP21.65■■□□□ 1.06
VEGFA-206ENST00000372077 CIZ1Q9ULV3 898 aaPredicted RBP21.65■■□□□ 1.06
VEGFA-206ENST00000372077 ENTPD3O75355 529 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 CUL4AQ13619 759 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 SLC4A8Q2Y0W8 1093 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 TTC6Q86TZ1 520 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 MICALL2Q8IY33 904 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 ESR2Q92731 530 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 MTA3Q9BTC8 594 aa21.65■■□□□ 1.06
VEGFA-206ENST00000372077 NASPP49321 788 aaPredicted RBP21.64■■□□□ 1.05
VEGFA-206ENST00000372077 RRP12Q5JTH9 1297 aaKnown RBP21.64■■□□□ 1.05
VEGFA-206ENST00000372077 ZFPM1Q8IX07 1006 aa21.64■■□□□ 1.05
VEGFA-206ENST00000372077 DYNLL2Q96FJ2 89 aa21.64■■□□□ 1.05
VEGFA-206ENST00000372077 TPCN1Q9ULQ1 816 aa21.64■■□□□ 1.05
VEGFA-206ENST00000372077 WNT10BO00744 389 aa21.64■■□□□ 1.05
VEGFA-206ENST00000372077 C16orf86Q6ZW13 317 aa21.64■■□□□ 1.05
VEGFA-206ENST00000372077 TMEM87BQ96K49 555 aa21.64■■□□□ 1.05
VEGFA-206ENST00000372077 TOMM22Q9NS69 142 aa21.64■■□□□ 1.05
VEGFA-206ENST00000372077 FKBP1CQ5VVH2 108 aa21.63■■□□□ 1.05
VEGFA-206ENST00000372077 BRF1Q92994 677 aa21.63■■□□□ 1.05
VEGFA-206ENST00000372077 COL2A1P02458 1487 aaPredicted RBP21.63■■□□□ 1.05
VEGFA-206ENST00000372077 ESPNB1AK53 854 aa21.63■■□□□ 1.05
VEGFA-206ENST00000372077 GABPAQ06546 454 aa21.63■■□□□ 1.05
VEGFA-206ENST00000372077 IGDCC4Q8TDY8 1250 aa21.63■■□□□ 1.05
VEGFA-206ENST00000372077 DHX36Q9H2U1 1008 aaKnown RBP21.63■■□□□ 1.05
VEGFA-206ENST00000372077 TMOD2Q9NZR1 351 aa21.63■■□□□ 1.05
VEGFA-206ENST00000372077 PRDM1O75626 825 aa21.62■■□□□ 1.05
VEGFA-206ENST00000372077 EVCP57679 992 aa21.62■■□□□ 1.05
VEGFA-206ENST00000372077 SH2B1Q9NRF2 756 aaPredicted RBP21.62■■□□□ 1.05
VEGFA-206ENST00000372077 FGD1P98174 961 aa21.62■■□□□ 1.05
VEGFA-206ENST00000372077 ME3Q16798 604 aa21.62■■□□□ 1.05
VEGFA-206ENST00000372077 SH2B2O14492 632 aaPredicted RBP21.61■■□□□ 1.05
VEGFA-206ENST00000372077 LARGE1O95461 756 aa21.61■■□□□ 1.05
VEGFA-206ENST00000372077 NBPF9Q3BBW0 867 aa21.61■■□□□ 1.05
VEGFA-206ENST00000372077 GPT2Q8TD30 523 aa21.61■■□□□ 1.05
VEGFA-206ENST00000372077 GPHNQ9NQX3 736 aaPredicted RBP21.61■■□□□ 1.05
VEGFA-206ENST00000372077 GPRC5DQ9NZD1 345 aa21.61■■□□□ 1.05
VEGFA-206ENST00000372077 ATRNL1Q5VV63 1379 aa21.61■■□□□ 1.05
VEGFA-206ENST00000372077 CLRN2A0PK11 232 aa21.61■■□□□ 1.05
VEGFA-206ENST00000372077 SYCE3A1L190 88 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms